Oncorhynchus kisutch (coho salmon): 109868142
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Entry
109868142 CDS
T09179
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109868142
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109868142
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109868142
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109868142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Cnd1
Sec7-like_HUS
Dopey_N
ParcG
MMS19_N
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
109868142
NCBI-ProteinID:
XP_031653123
Ensembl:
ENSOKIG00005012783
LinkDB
All DBs
Position
LG2:51585013..51673217
Genome browser
AA seq
1628 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYIVDKEKSQDLEQDQTALDRMVDGIATTWVN
SSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLASLIDRLGDSKDQVRDQDQILLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGACLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSASSSKAPPSGRRAVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNRDMEDNLSKVREVLSDDKNDWEHRVVALKKVRSLLVAGALDYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLLGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSAIGGSMTRGKMVSSRVNSNSGGSLQRSRS
DVDVNAAASAKSRLITVPSASPFSSAAALPPGSYASLDGTPGKIDTGRVRTRRTSSGNAV
GASATVTDSRGRSRAKMMSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPSASSTPADKRSKVPRSQGCSRDSSPNRLGLARLCGKALVPGTPLSSYNTLARSR
IPRPSMSQGCSRDTSRESSRDTSPARGFKPLASRRTSRSTSALSTADPHSQSDRFGLIHQ
ARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASS
ACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVE
LKRLCEIFTRMFADPHSKRVFSMFLETLVDFILVHREDLQDWLFVLLTQLLKKMGADLLG
SVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLGRQMDPTD
FVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGA
TKLLHNHLKNSSNTSSVSSPSNTIGRTPPRHTPSRTSPLTSPTNCSHGGLSPSRLWGGCW
SGDGLSKHPPPPHPPPPPSTPSGPALRVLRRAYSPSMLEYDTENMNSDEIYSSLRGVTEA
IQSFSYRSQEDLNEPRGKRDDAVGREGVASSPGSDARLGLDVVEGGRMALDNKTSLLNTP
SPRSFSGPRAREFAPYGYGDTITSSYDKSALKEAVFDDDVEQFRDCRRQDGSGENKMVLP
KGFAPGSQDHSDLVADLLKELSNHNERVDERKGALVELLKITREDSLAVWDEHFKTILLL
LLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEA
ASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERITKESLHQLLPDIIPGLL
QGYDNTESSVRKASVFCLVAIYSVIGEELKPHLQLLTGSKMKLLNLYIKRAQTTNSNSSS
SSDVSSHS
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtattgtctggcccaggtggtgcagaaagacctggggcggaag
gtgcaggtgggacaggagctcatagattacatcgtggataaggagaagtcccaggacctg
gagcaagaccagacggctctggacaggatggtggacggcatcgctaccacctgggtcaac
tcctccaatttcaaggtggctttgctaggtatagaccttttatctgccttagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactggccagtctgatagatcgtctg
ggtgattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaagatcatggag
caggctgcctccccacagtatgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagcctgcctttgtctcatctcaactctcaacatgtacggagcc
caaggcctaaccctcagtaaaatagtccctcacatatgtaatcttctaggagatcccacc
agtcaggtgagagatgcagctatgggctgcctggtggagatctacagacacgtgggggag
agggtgaggatggatctttccaagaagggcctgccacagtcacggttgaatgtaatcttc
agccgatttgatgaagtccaaagatctgggaacatgatcccatcctcaggttcagataag
aactttgatgatgaggactctgtggacgggggccggtcctcctcctctgcatcgtcctcc
aaggcgccccccagtggtaggagggctgtagctgcggcttctgtccgcaggcccagctct
gccaccggacctggcaagatctctgctaaagatgctgctgcaggtgctgttgatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagattcactccaacagagatatg
gaggacaatctctccaaggttcgggaggttctatctgacgacaaaaacgactgggagcac
agagtcgtcgccctgaagaaggtgcgttctctgctcgtggctggagccctggactatgat
agtttccctcagcagctccgtctgcttgaggcccctctcaagctgtcagctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacgttactggga
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcacgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
cgaaggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctgttctgactgaaaccatcaagaaagggatccatgatgctgactca
gaggccagatcggtcgcgagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatctgttccaggccctggagtcaacctatcagaaggctctgcagtctcacctg
aagagttctgacagtgtcgtgtctctcccccaatcagaccgctcatcctcctcctcacag
gagagcctcaaccggcccctgtctgtcaagagtgccataggaggcagcatgacaaggggt
aagatggtgagttccagggtgaactccaactccggcggttcccttcagcgttcccgtagt
gatgtcgacgtgaacgccgcggccagcgccaagtcacgcctgatcactgtgccctccgct
tctcccttcagctcagcagctgccctgcccccaggctcctacgcctcactagatggcaca
cccggtaaaattgatactggccgtgtgcgtacgaggagaacaagctccggcaatgctgtc
ggagccagcgctactgtgactgacagcagggggcgcagccgagccaaaatgatgtcccag
tcccagcgatccagatctgctaaccccactgggggtggtaaggcccggacttcatccaat
cagactggcagtcgctccagttcccctggcaagctgctgggccactcgtctgggtacggg
aggatcagcaggccgccctcagcctccagcacccctgcagacaagaggagcaaggtcccc
cgcagccagggctgcagtagagattcctctcccaacaggctgggcctagccaggctgtgt
ggtaaagctcttgttcctggtactcctctctcctcctacaacacgctagcaaggagccgt
atcccccggcccagcatgagtcagggctgcagcagggacacatctagggaaagcagccga
gacaccagccctgctcggggcttcaagcctcttgcctcccgacgtacctcccgctctacc
agcgccttatccacggctgacccccacagccagtcagaccgatttggtttgatccaccag
gcccgcatttctgcctcggtgaacgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgacgcactgctattaggagactccagaaataagcggaagcctatgagg
cggcgctatgagtctcctggtatctactctgacgatgacgctaacagtgatgcgtccagc
gcctgctcggaacggtcgtacggctcccggaacggaggtatccctcactacctgcgtcag
acagaggatgtggcagaggtactcaaccactgtgccagctccaactggtctgagaggaag
gagggactgctgggactgcagaacctgctgaagagtcaaagaatactcagccgggtggag
ctgaagagactctgtgaaatctttaccaggatgttcgcagatccacacagcaagagagtg
ttcagtatgtttctagagactctggtagactttatcctggtgcacagagaggacctgcag
gactggctgttcgtcctgctcacccagctactgaagaagatgggagctgacctgctgggg
tctgtccaggccaaggttcagaaggctctggacatcaccagggagtcttttccgtttgat
cagcagtttaacatcctgatgagattcattgtggatcagacacagacacccaacctcaag
gtgaaggtagccatcctgaagtacatagagtcactgggaagacagatggatcctacagac
tttgtcaactccagtgaaacgcgactggctgtatctcgcatcattacctggaccacagaa
cccaagagctctgacgtcaggaaggcggcccaggtggtgctgatttctctgtttgagctg
aacaccccggagttcaccatgctgctgggagccctgcccaagaccttccaggacggggcc
accaagctgctccacaaccacctcaagaactccagcaacaccagcagtgtgagttctccc
agcaacactattgggcggaccccaccccgccacacccccagccggaccagccccctcacc
tctccgaccaactgctcccatggtgggctgtctccgagtcggttgtggggtgggtgttgg
agtggcgatgggctgtctaagcacccccctccccctcatcctcctccgcctccctccacc
ccctctggccccgccctcagggtcctccgcagagcgtactctcccagtatgttggagtat
gacacagagaacatgaactctgatgagatatacagctccctgcgaggggtcacagaggcc
atccagagtttcagctatcgcagccaggaggacctcaacgaaccaagagggaagagggac
gatgctgtggggcgtgaaggtgtggcgtcctccccaggctcagatgcccgtttggggctg
gatgtggtggagggtgggcgtatggccttggataacaagacctccctcctcaacactccg
tctccccgctccttctccgggccgcgggccagggagttcgccccctacggctatggggac
accatcacctcatcctacgacaagagtgccctaaaggaggccgtgttcgacgatgacgtg
gaacagttcagagactgccgtcggcaggacggcagtggtgagaacaagatggtgctgcct
aagggctttgctccgggttcccaagaccactcagaccttgtggcagatcttctgaaggag
ctgtccaatcacaacgagcgtgtggatgagcgtaagggggccttggtggagctgctgaag
atcacacgagaggacagcctggccgtgtgggacgaacacttcaagaccatcctcctactg
ctcctggagacactgggggataaagaccacaccatccgggccctggctctgcgggtactg
aaggagatcctgagaaaccaaccggcccgcttcaagaactatgctgaactcaccatcatg
aagaccctggaggcacacaaagactcccacaaggaggtggtgcgggcagcggaggaggct
gcctccaccctagccggctccatccacccagagcagtgtatcaaggtgctgtgtcccatc
gtccagacggctgactaccccatcaacctggctgccatcaagatgcagaccaaggtgatt
gaacgcatcaccaaggagtccctccaccagctgctgcctgacatcataccaggactactg
cagggctatgacaacacggagagtagtgttcgcaaggccagtgtgttctgtctggtggcc
atctactccgtgattggagaagagctcaaaccacacctgcagcttctcacaggcagcaag
atgaagctgctgaacttgtacatcaagagggcccagacgaccaacagcaacagcagcagt
tcctcggacgtgtcctcacacagctag
DBGET
integrated database retrieval system
