Oncorhynchus kisutch (coho salmon): 109868961
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Entry
109868961 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM16 isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109868961
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109868961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
PRC2_HTH_1
Motif
Other DBs
NCBI-GeneID:
109868961
NCBI-ProteinID:
XP_020314335
Ensembl:
ENSOKIG00005026330
LinkDB
All DBs
Position
LG24:20614483..20624517
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AA seq
613 aa
AA seq
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MASKLWTKEEISCPVCLNTLTEPTTLPCGHNFCLDCIRKCWDESGSISSRSNAVSCCPYC
RETFRLRPTLTKNSILEKMVEKLKTTLLDTSPGYPYDGPEDVVCDVCTLLGSRRKAKAVR
ACRECKLSYCQSHLRAHLDILLLQKHTLVGVVVKELQLEKLCPQHDKPLDMYCRLERRCI
CSLCAVEEHKSHQTVSAETERAKKQALLAVEQIKSNSKLQMKEELLTQLGEAAGSLKGFA
QAAVEVSDMIFVELIHSLEKRRAEVRDSIKDREKTLAAQAARAETRLRQDITTLQRRNSD
LEKLAQTQDSILFLQRWQPISLLPDREPSVISERHSFGAVMSIITEFKELLKDMNVDFLE
KIKQAVANVDILESPVPMTKPQGRQVRRAHSECQPMPPVPLQKAWSISRDFTFGIPKTRP
DFLHYAFQLTLDTDTAHRNLCFSDQNRKVTLVKSRGQSRTRSRLPKTFDFWEQVLCWEGL
TGARYYWEADWRGKGVFIGVTYESIQRGGRGLACGLGYNVKSWSLQCSDTSYSAWHDNIE
TKITAKVSSPRIGVYLDHKAGTLSFYSISDSSMILLHSFLSEDFSEPLYPGFGVGVQSSL
ILCQLGRQRQLRT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaagctgtggacaaaggaggaaattagctgtccagtctgtttgaacacccta
acagagcctacaactcttccatgtggacacaacttctgcctcgactgtatcagaaaatgc
tgggatgagagtggtagtatcagcagcagaagcaatgcggtttcctgctgtccttactgt
cgagagacattcagattgcgccccacactgactaagaactcaatactggaaaagatggtg
gagaagctaaagactactttactcgatacctctcctgggtatccgtacgatgggcctgaa
gacgtggtgtgtgacgtgtgtactcttctagggtccaggaggaaggcaaaggctgtgagg
gcctgtcgggagtgtaagctgtcctactgccagtctcaccttagagcccacctggatatc
cttttgttacaaaagcacactctggtgggtgtggtggtcaaggagctgcaactggagaag
ctgtgtccccagcatgacaaacctctggacatgtactgcagacttgagaggaggtgtatc
tgttctctgtgtgcagttgaggaacacaaaagccaccaaactgtctccgctgagactgaa
cgggccaagaaacaggcactgttggcagtggaacagataaaatccaacagtaaactccag
atgaaagaggagctgctgacacaactgggagaggctgcgggatctcttaaaggatttgca
caagctgcagtggaggtcagtgacatgatcttcgttgagctgatccactccctagaaaag
aggagagcagaggtgagggactccatcaaagatagggagaagactctggctgctcaggca
gcaagagcagagacacgactgagacaggacataacaacactgcaaaggagaaacagcgat
ctggagaaactcgcccaaacacaagacagcatactcttcctccagaggtggcaacccatc
agcctgctgccggatcgtgaacctagtgttatcagtgaaagacattcatttggagctgtg
atgtcaattatcactgaattcaaggagctgcttaaggacatgaatgttgacttcttagaa
aagattaaacaagcagttgcaaatgtggacattttggaatctccagtacccatgaccaaa
cctcagggcaggcaagtgagaagagcccattctgaatgccagccaatgccaccggtgcca
ttgcaaaaagcatggagcataagcagagatttcacatttggaattcctaagaccagaccc
gacttcttacactatgcttttcaactcactctagacactgatacagcacaccgcaacttg
tgcttctctgaccagaaccgcaaggtgactctggtcaagtccagaggtcaatccaggacc
aggtcacgtctcccgaagacctttgacttctgggaacaagtgctgtgctgggagggcttg
accggtgcccgttactactgggaggcagattggagaggcaaaggagtgttcattggagtg
acctatgagagcattcagaggggaggcaggggactagcgtgtggcctggggtacaatgta
aagtcatggagcttacagtgctctgacaccagttactcagcatggcacgataacattgaa
accaagatcactgccaaggtctcatcccctagaataggggtttatttagatcacaaagca
ggaactctgtctttttacagcatctctgactcctccatgattctgctccatagttttttg
tcagaggacttctcagagccactgtatcctggttttggtgttggggtacaatcctcgttg
atactttgccaattggggagacaacgacaattgaggacatag
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