Oncorhynchus kisutch (coho salmon): 109870795
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Entry
109870795 CDS
T09179
Symbol
tmsb4x
Name
(RefSeq) thymosin beta-4 isoform X1
KO
K10170
toll-like receptor 8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109870795 (tmsb4x)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
109870795 (tmsb4x)
04090 CD molecules [BR:
oki04090
]
109870795 (tmsb4x)
Pattern recognition receptors [BR:
oki04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
109870795 (tmsb4x)
CD molecules [BR:
oki04090
]
Proteins
109870795 (tmsb4x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Thymosin
LRR_1
TIR
TIR_2
LRR_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
109870795
NCBI-ProteinID:
XP_020317005
Ensembl:
ENSOKIG00005017676
LinkDB
All DBs
Position
LG26:17003678..17012468
Genome browser
AA seq
1077 aa
AA seq
DB search
MDATTCWLQLAPLFLYHFLVPTSCHWMPRQFPCDVTVNTTNTTDDIIFNCEERRLKNVPV
GITRNVTVLDLSENNIRNVSLDAFSNLENLTLLNLNCVNKNGDTHIAEGAFKNLTNLQDL
RLNGNGLINIPQILPLILDKLMLDNNKINFSNMINLVGIQHVKELYLSKNCYYWNPCETD
FTIGYGTFSVLTKLKVLMLAYNNLTRVPKGLPSSIQELHLDSNKIQQIAEDDFLGLTHLT
ILELQGNCPRCSNAPYPCVPCPNDSLDIHPHAFHGLTQLQTLHLAGNSLRFINNSWFESL
NNLTHLFLSYNYLTNTITSGTFFSYLPKLEKIDLSFNYDLLAYPETLELSKNFSQLVSLT
TLHIMGFVFREIHLETLRPLYELKRLSVLNIGTNFIVRSDSHIFNKFSNSSLKVIYLAEN
RLYPISVNESPGCGTGGNLKSVLYTSPLTGYYSNSRDFSYGINHNLVKPECFISGRVLVL
SSNNLFFISPKQFEGYGDIACLNLSRNGFSAALNGTEFTSLPNLKYLDLSFNKIDLAYDN
AFKELKKLKILDLSYNSHYFEVSGVTHNLNFLKNLPTLKVLNMSHNNIFTLTTKQMTSTS
IKELQFQHNLLATLWKEGDDSYNSLFKKLTNLTYLDISFNSIEKIPSKVYENIPYTLQKL
CISHNSLCHFDWDKLAGFQQLNFLDLSYNSLFHVSANLSNFTDTLQILDLSHNQIFQLSR
GFLRGAQSLQILDLSYNQLTIINKTTFLSGPENYMKTLSLQGNPFQCTCDLLEFILWIKD
NKNVEIPRLASEVTCNMPAKMRGQPMILFNIKECNEDNIAFLIYSLSTSLIMFTVVITMA
GHVFYWDASYILYYLRAKLKGYHSLKSTTTDNLYDAFVTYDTRDPLVSDWVLNQLRVQLE
ERGERHLPLCLEERDWAPGVPLIDNLFQSIRQSRKTVFVLTEAYIRTGNFRMAVYLAHQR
LLDENIDVIVLVLLEPVLQHSHFLLLRRRLCGRSVLEWPQSAAAETWFWKHLRNAVRLDN
QVMYNKIYSRSSASMSDKPDLAEVSNFDKTKLKKTETQEKNPLPTKETIEQEKQATA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaccacctgctggttacagttggctccattgttcctataccacttcctggta
cctacctcatgtcattggatgccacggcagtttccatgtgacgttacggtcaatactacc
aataccacggatgacatcatctttaattgtgaggagcgtcgactgaaaaatgtacctgtt
ggcatcaccaggaatgtgaccgtgctggacctatcagaaaacaacatcagaaatgtatct
cttgatgcattttctaatctggagaacctgacccttctcaatctcaactgtgtcaacaaa
aatggtgacacacacatcgctgaaggtgccttcaagaatctgacaaacctgcaggaccta
aggcttaatggcaatggcctcatcaacattcctcaaattctcccactcattctggacaaa
ctcatgctggacaataacaagatcaatttctcgaatatgatcaaccttgtcggtatacaa
catgtgaaggagctgtacttatccaaaaattgctattactggaatccctgtgagactgac
tttactattggatatggcaccttctcagtattgactaagttgaaggttttgatgttggcc
tataataatttaactcgtgttccaaaaggactgccaagctctatacaagaattacacctc
gattcgaacaagatacagcaaattgctgaggatgatttccttggactaacccatctaaca
atcctggaattacagggaaactgtccacgatgctccaatgctccatatccttgtgttccc
tgtcctaatgattctctggatattcatcctcatgcatttcatggtcttacacagttacag
acactgcacctagcaggcaactcacttcgtttcatcaataactcctggtttgagagcttg
aacaatctcacacatctgttcctgtcttataattacttaacaaatactatcaccagtgga
accttttttagctatctaccaaagctagaaaagattgatttgtcatttaattatgatttg
cttgcctaccctgaaacccttgagctttcaaaaaacttttcacaattggtgtctcttaca
accttacatataatgggttttgttttcagggaaattcatttagaaacactcagaccgctt
tatgaactcaagcgtctttcagtgttgaacatcggaactaactttattgttcgatctgat
tcccacatattcaacaaattctcaaactcaagtctcaaagtcatatatcttgcggagaac
aggctttatccaatttcagtgaatgagtccccaggttgtggcacaggcggcaacttaaag
tcggtgttgtacacgtcgccactgactggatattattccaattcaagggacttttcttac
ggaataaatcacaaccttgtgaagccagaatgctttatctctggtcgagtgctggtcctt
agttcaaataatctctttttcatttctccaaagcaatttgagggctatggtgacattgca
tgtctaaacttatcaagaaatggattttcagcagcattgaacgggacagagttcacctca
ttaccaaacctaaaatatctcgacctgtcctttaacaagattgacctggcctatgacaac
gccttcaaggaattaaagaaactcaaaatactagacctaagttacaacagccactatttt
gaagtgtctggtgtgacacataatttaaattttttgaaaaatctaccgactttgaaagta
ttgaatatgtcacacaataacatttttacattaaccactaagcagatgacaagcacatct
ataaaagagcttcaatttcaacacaatttgttggctacattatggaaagagggggatgac
tcatacaacagcctttttaaaaagctgacgaatttgacctatctggatatttcatttaac
agcattgagaagatcccatcaaaagtctatgaaaacataccatatacccttcaaaaacta
tgtattagtcataattcactctgccattttgattgggataaactggcaggttttcaacaa
ctgaatttcctggatctaagctacaattctttatttcatgtgtcagcaaatctctcaaac
ttcacagacacacttcagattcttgacttaagccacaatcagatttttcaactctctcgt
ggatttcttaggggtgctcaaagccttcagatacttgacctcagctacaaccaacttact
atcatcaacaagaccaccttcctatcgggccctgaaaactacatgaaaaccttgtccttg
caaggtaatccattccagtgtacctgtgatttactagagttcatcctgtggataaaagat
aacaaaaacgtggagatccccagactggccagtgaggtgacctgcaacatgccagccaaa
atgagaggccaaccaatgatactgtttaacattaaagaatgcaacgaggacaacatagcc
ttcctgatttactccctctccacttccttgatcatgttcactgtggtcatcactatggca
gggcatgtgttttattgggatgcctcctatattctatactatctgagggcaaagctgaag
ggctaccattcgttgaagtcaacaacaacagacaatctctatgatgcctttgttacctac
gacaccagagacccgttggtgtcagactgggtactgaaccaactgcgggtgcagctggaa
gagaggggggagagacacctgcctctctgtctggaggaacgagactgggcccccggggtc
cccctaatagacaacctcttccagagcattcgacagagccgcaagactgtctttgtgctg
accgaggcttacatcaggactgggaacttcaggatggctgtgtacctggcccaccagagg
ttgctggatgagaacatagatgtgattgtgttggttctcctggaacccgtgctgcagcac
tctcacttcctccttctgcggcggcgtctgtgtggaaggagtgttctagagtggccccag
tctgcagccgctgagacctggttctggaagcacctaaggaacgctgtcaggttagacaac
caggtgatgtacaacaagatctactccagatcctctgcaagcatgtctgacaagccagat
ctcgctgaagtctctaacttcgacaagaccaagttgaagaagaccgagacacaagagaaa
aacccattgcccaccaaagaaaccatcgaacaggagaagcaagcaacagcatga
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integrated database retrieval system
