Oncorhynchus kisutch (coho salmon): 109872577
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Entry
109872577 CDS
T09179
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109872577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109872577
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109872577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
109872577
NCBI-ProteinID:
XP_020319450
Ensembl:
ENSOKIG00005047784
LinkDB
All DBs
Position
LG28:complement(26865068..26873628)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSPREKRFIAFSSLVIFCLVVYYIPTFFYIVFILGVCCVACIYHSGESLNARLGPHPRHG
LTVPPVLRRWLPEIANGLHTAGRVRSRTVKGDVREPLVFTDQRRSEGAIYRKVAGQSDSF
LFSPRDILMGSYIGKAESPPSVVGRPRAGANSRVNPNAREQLREILARPNHAVYTPNKRL
SFGREPLGMMGRFTITPQRHYPLQQTGTSSVGILPPAQWDSFKKKNILTPRNSPAVHSPV
TVKIARPDRNTSQSPFFDHLNSPGILGSPGLGAPADPCSRETVLSVLKESRKREVDNEDD
MSFTAGQKSKRRRHDSSGSAHSAFEPLLPNGAPTPPVPKPGTLKRGLNAMTEESMMKKSR
TSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGFAQRKKASTRSLSPLSSPGSSRSQTPE
RASKKPREEDARSPSSASSTRSDKTLMDPAPTTEKLTLAPEVHVASDSAGSGKRKRKIPL
VSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEECVPEKTVPDPVVTTSSQ
PPVSSDPTPTLATLLASPLSISTSASVVAPISVINLDPVPSSTAAPVTTTPAANPLLESL
KMMRNNALASAAATTAAPAVSLVKVLMTPAPLVTSALQAETSLTAPQPTPASSFQPAPTS
LSQPASTMSSAFIQVLSQVTKAPSSVPSLGGASLFGLANTLTAPSSSLAPTATTETTSSN
NPLLASVFKPIFGPATPASPATESTPAVPTFKPIFGSATATSAFGQPAATSAPSTASASA
SLLSGLTNSSTMAPAASLFTGVSSSTAPAPVPSAVPAAPPSVKSLFGNWSAPPAMTSATT
IAPATGSTFQFGSTTAPAPTLSSTAAATTSNNSFSFGAMTTTSAATQLAPPATAQGGFTF
GQAAATQNSTTASFSGFGMATAVTTTAAAPAIQSTFMFGKSSFDASTASAFPSATQAPAA
ASAAANPFTFGSAGATPAPFAFGAAATTAASTFGTPTKLAFGASSTGFAFGNTVAVPAAP
AFGSATQTAGTLPASAPTFSFGGVSAQQAPATPVQPTTGGFNFGAAISGTPFGTPNLTTQ
TPGFNFGAAVSDKPAFGTSTPTFGQSTAAGPIAFGSPGTPVQGFSALAPSAFGSPSTPSF
SIGAGSKTSGARQRLQARRQHPRKK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttcatagcgtttagctctctcgtaatattctgtctagtt
gtgtattatattccaacctttttttatatagttttcattcttggagtttgttgcgttgcc
tgtatttatcacagcggagaatcactcaacgctaggttaggccctcatccacgccatggt
ctgactgttccacccgtgctgcgacgctggttgccagagattgcgaacggattacacaca
gcggggagagtcagaagtcgcacggtcaagggtgatgttagggaaccgctagtatttacc
gaccaaagacgttccgagggcgctatttatcggaaagtcgcgggacaaagcgactcattt
ctgttcagtcctcgggatatactaatgggaagttacattgggaaggcagaaagtcctccc
tcagttgttgggaggccgcgagccggtgcgaattcgcgtgttaacccaaacgcacgagaa
caactgcgcgaaatattggcgcgacccaaccacgctgtttatactccgaacaaaagactg
tcattcgggagggagccccttggcatgatgggcaggttcaccataactccccaacgccac
taccccctccagcagaccggcacatcctctgtgggcatcctgccacctgcccagtgggac
agcttcaaaaagaagaacattctcacccctcgaaactccccagcagtccacagtccagtc
acagtgaagattgctaggccagatcgcaacacctctcaatcccctttctttgatcatttg
aactccccgggaatccttggttctccaggcctgggggcccctgcagacccttgctccagg
gagactgttctgagtgtgctcaaagagagccgcaagagagaggtggacaatgaagatgat
atgagcttcactgcagggcaaaagagcaaaaggaggcgtcatgacagcagtgggagtgct
cactcggcatttgagccactgctgcccaatggggctcctacaccgccggtgcccaagcct
ggtacgctgaagcgaggactgaacgctatgacggaggagtcaatgatgaagaagtcacgc
acctcctccatcagttctgtgagctgtggcctgacccccagcggcaccctgggctcggtc
cgcaactccattcgcagctccctcagctcctcacaaggctttgctcagcggaaaaaggcc
tccacccgcagcctctcccctctctccagccctggttcatcccgctcccagaccccagag
agagcctctaaaaagcccagggaagaggatgctcgctcccccagctctgcatcctcgacg
aggtctgacaagacgttgatggacccagcacccaccactgaaaaactgactctagccccc
gaggtccatgtggcgtcagactctgccggtagtgggaaacggaaacgcaagattccgctg
gtgtccagtcgtagaggagaccaaatctctctacctccacctcctgagctgggctacacc
atcactgtgaaagacctggatcaggagaaaaaagctgctctcagtcagatcaacacagtc
cttgaagagtgtgtaccagagaaaactgtgccagatccagtagtgaccacatcttctcaa
cctcctgtgtcaagcgaccccacacccaccctggccaccctgctggccagccctctttcc
atatcgacatctgccagtgtggtggctcctatctctgtgatcaacctggatcctgtcccc
tcaagcacagctgcacctgtcaccaccacccccgcggccaaccccctcctggagtctctt
aaaatgatgaggaacaacgcccttgccagtgctgctgccacaactgcagctccggctgtc
tccttggtgaaagtattgatgactcctgcaccactggtgacttctgctctgcaggcagag
accagcttgactgctcctcagcccacaccagcctcctccttccagcctgccccaacctcc
ctctcccagcctgccagcaccatgtcctctgctttcatccaggtgctgagccaagtcacc
aaggcccccagcagtgtccccagcctgggtggagctagcttgtttggcctggccaacaca
ctgacagccccttcctcctcactggcccccaccgccaccacagaaacaaccagcagtaat
aatcccctcctggcctctgtgttcaagcccatcttcgggcctgcgaccccagcctcccca
gccacagagagcacacctgctgtcccaacctttaaacccatatttggaagtgccacagcc
accagtgcttttggacagccagccgctacctcagccccctccacagccagcgcatctgct
tcattgctcagcgggctcaccaacagcagtacaatggcccctgctgcctccctgttcact
ggggtgtccagcagcaccgctcctgccccagtcccctccgcagtcccagccgccccgcca
tctgtcaagtctctgtttggaaactggagtgcgccgcctgcaatgacctctgccacgacc
attgcccctgccacaggaagtactttccagttcggctccaccacagctcctgcacccacc
ctcagctccactgcagccgccaccactagcaacaacagcttttcgtttggtgccatgacc
accacctctgctgccactcaacttgcccccccagccaccgcccaggggggatttaccttt
ggccaggctgcagccacccaaaactctaccaccgcatccttcagtggctttggaatggcc
actgcagtcactactactgctgcagcacctgcaatccagtccacgttcatgtttgggaag
tcctcattcgacgcttccacagcatcagcgttccctagcgcaactcaggccccggctgct
gcttccgcagcagctaatcctttcacatttgggtcagctggggccacccctgcccccttc
gcttttggtgcagctgccactacggcagcttctacatttgggacccccactaagctggca
tttggagccagctctacaggttttgcatttggcaacaccgtggctgtcccagcagcccct
gcctttggctctgccactcagactgccggcacactcccagcctctgccccaaccttctcg
tttggtggtgtgtctgcacagcaggcccccgctacccctgtccagccaaccaccggagga
ttcaacttcggcgcagcaatttcaggcactccgtttggaacacccaacctcacaacacag
acaccaggcttcaacttcggggctgctgttagtgacaagccagccttcgggacgtctacc
cctacttttggccagagcacagctgcaggtcctattgcctttggaagcccaggaactcca
gtccaaggattcagtgctttggcaccctcagcattcggctctccatcaactccctcgttc
tccattggtgctggctccaaaacgtcaggggcacgccagaggctacaggcccgaaggcag
caccccaggaagaaatag
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