Oncorhynchus kisutch (coho salmon): 109873200
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Entry
109873200 CDS
T09179
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109873200
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109873200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
zf-RING_6
ALS2CR8
PI3K_P85_iSH2
EzrA
DUF3450
Motif
Other DBs
NCBI-GeneID:
109873200
NCBI-ProteinID:
XP_020320384
Ensembl:
ENSOKIG00005046197
LinkDB
All DBs
Position
LG28:complement(4399558..4407078)
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AA seq
574 aa
AA seq
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MADPTSSDYFSCPLCVGLLRDPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCKITFTQ
RPVLRPNTMLTKVAEKIKKTGANLNLNLTPPGNTFAGPADVPCDYCSGKKLKAVKSCLNC
LASYCEKHLKPHYESATFKRHKLVDELGNLDRKICPQHQKSLELFCRTDQMCICAICTVS
EHKGHDIVSAEAERSEKQKLLGVAQAEIRQKCQDRVKELEELRTAVDSLKSSARRAMAES
EKMFEDMIRSIERMRSEVTKMIGINEKAAFNQAEGLVERLEQEIDELKKKETGLKQLYST
EDHIHFLQNFNYLCTPTDDGFIPRVSVNPDFSFSAARKAVAEIKDRLEELGREELVKISK
SVNEVPVYTTEKREKSSRVIEVMTVDSPPPPEPKTRSEFLKYFCQLRLDPSTAYKELHLS
ESSRKVIRTRDLQPYSDTPERFDSFAQVLCREALSGGRFYWEIEWSGEFSMGVAYKGISR
KGKGSLCLLGYNDKSWSLLCSDTGYSAWHNRADKAINAPHSPRIGVYLDHSAGVLAFFSI
GNHMTLLHRFETMFVEPLYPGFGVGTSVKICQLK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcccacgtcttcggattacttcagctgcccactgtgtgtggggctgctgagg
gaccccgtggctatcccctgcggacacagtttctgcatggactgcatcagcggctactgg
aatgaggcagactacacagggatctacatctgcccccagtgtaagatcaccttcacccag
aggcctgtgctcaggcccaacactatgctcaccaaggtggcagagaagatcaagaagact
ggtgccaacctcaacctgaacctcacacccccagggaacacctttgctgggcctgccgac
gtgccctgtgactactgctctggtaagaagctcaaggctgttaagtcctgcctgaactgc
ctggcctcatactgtgagaagcacctgaagccccactatgagtcagccacattcaaaagg
cacaagctggtggacgagctggggaacctggacagaaagatctgcccccagcaccagaag
tccctggagctgttttgccggactgaccagatgtgtatctgtgccatctgtactgtcagc
gaacacaagggacatgacatcgtctcagccgaggcagagaggagtgagaaacagaaactc
ctgggagttgctcaagctgagatcagacagaaatgtcaggacagggtgaaggagctggag
gaactgagaacagcagtggactcactaaagagctcagcccggagggccatggcggagagt
gagaagatgtttgaggatatgatccgctccatcgagagaatgaggtcagaggtgacaaag
atgattggcatcaacgagaaggctgcattcaaccaggctgaggggctggtggagaggctg
gagcaggagatagatgagctgaagaagaaggagacgggactcaaacagctgtacagcact
gaggaccacatccacttcctacagaacttcaactatctgtgtactcccacggatgatggc
tttatccccagagtgtcggtgaacccagacttctcgttcagcgcagccaggaaagccgtg
gcagagatcaaggatcgtctggaggagctgggtagagaggaacttgtgaagatctccaag
tcagtgaacgaggtccctgtttatacgacagaaaagagagagaaaagcagcagagtcata
gaagtcatgacagtggacagccctcctccaccagagcccaagaccagatcagagtttctg
aaatacttctgccagctgagactggaccccagcacagcctacaaggagctacacctgtcg
gagagcagcagaaaggtgatccgaaccagggacctccagccctactctgacaccccggaa
aggtttgacagcttcgcgcaagtgctgtgccgcgaggccctgtctggtggtcgcttctac
tgggagatcgagtggagcggggagttctccatgggggtggcctataagggaatcagccgc
aaggggaaaggatcactgtgtctgctgggctataatgataagtcttggagcctgctgtgt
tctgatacagggtactcagcctggcacaacagggcagataaagccatcaatgcgccccat
tcaccgaggataggggtctacctagaccactcggcaggggtcctggccttcttcagtata
ggcaaccacatgactctcctgcacaggttcgaaaccatgtttgtggagcccctctatccc
ggctttggagttggaacctcggtcaagatctgtcaactcaaatga
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