Oncorhynchus kisutch (coho salmon): 109875853
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Entry
109875853 CDS
T09179
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109875853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109875853
Membrane trafficking [BR:
oki04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109875853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
109875853
NCBI-ProteinID:
XP_020323867
Ensembl:
ENSOKIG00005012741
LinkDB
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Position
LG14:57584943..57605301
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AA seq
569 aa
AA seq
DB search
MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSELEQELACQ
NDHSSASQNVRRLLQNPRVSEMDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSEKHC
RMVTSMVEYGGKRVRGSDLVNPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSHFPYLGPSSLRDRPQDIIVFVIGGATYEEALAIYNLNRTVPGVRIVLGGTTIHNT
KSFLEEVTLTAGTGQAERLQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcggacca
gggatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatctgagatactacagaaggaggtctacctgttcgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgacccaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggccgaggcggatgaacaggaggtggtcgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagccaactctcctgccacgtaccacccag
ggtctgacctcggtgctgctggccctgaaaaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagcgactgggagagagcgtgaagcaaataatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcttggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgcattgacctgtccagagtcccagggatcagcaaggacctgaag
gaggtggtgctgtctgcagagaatgatgagttctatgccaataatctgtacctgaacttt
ggagagattggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtagacaactacccccag
ttcaaaaagatgtcgggtacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagagctggagcaggagctggcctgccag
aatgaccactcaagcgcatcacagaacgtgcgtcggctgctgcagaacccgcgggtgagc
gagatggacgcggttcgcctggtgatgctgtacgcactgcgctacgagagacacagtagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaagcattgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcgtc
aacccccaagatgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagaccttggaccagctgattaagggg
cggctgaaggacagtcatttcccctacttaggacccagctcccttagagaccggccacag
gatatcatagtctttgtcatcggaggggccacctatgaggaggcactggcgatctataac
ctgaaccgcaccgtgcctggggttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaggtgacattgacggcgggtacaggccaggccgagaggctgcag
agggcgggtggtcatccaaacagacgctga
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