Oncorhynchus kisutch (coho salmon): 109876470
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Entry
109876470 CDS
T09179
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109876470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109876470
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109876470
FA (Fanconi anemia) pathway
109876470
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
109876470
NCBI-ProteinID:
XP_020324470
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Position
LG3:18357521..18360976
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AA seq
592 aa
AA seq
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MSPQDVLATQTWLQSSWQIQVPFAWLEACVEWLQQEGGGAPLPQHQLNQQVLDQWLLTDL
RDLAHSVFPAGLYQAQKSELSGSFCVQLDSLLDISQPAYGQLQGWRGTDCTNEAVSAITQ
ATQRTWEAKPTRMLLLQLTDGVQTLEAMEYQPIPALSTTLKPGVKLQLQGQITCRLGVLL
LKPGNVKVLGGEVEELGERHSQGKVLCRALGLPEEEPQGPAEQPEVPQPVNQQADNQESD
DLELLANLETQERQVGWSVEPSLESGYRTRSEESSASYRNASLQSRHIESLADSLLVTSP
HEVIELDNLDIPDEDFDDLPLDELDDMIFQESPIQLTNGRDNQRDNLRRRQEEVSNHYAP
PLDDMRNESHFDSLDERDDPVLDEDMNCFFPPEPKAPRHEQRRDSTCVRELGTGQPSVAG
AERLSTKIPESAATVTLDSSPFTYLCLLQQVAAGASGLLECMSEVCVKAFIVTLQGNLKC
SKGEWLVSASISDGTGYMDVHLSDQVLTGLLGFSAAEKSKLDPARKDAGMKACQQGLVDM
CCVMTLRLDPAGGKAVVLKADAVTEEDFRALEERVKGRRGQEDSGTWTSEGC
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagccctcaggatgtgctagcaacccagacctggctccagtcctcttggcagatccag
gtgcctttcgcctggctagaggcatgtgtggagtggctgcagcaggaaggaggaggtgcc
cccctgcctcaacaccagcttaatcagcaggtcctggatcagtggctgctgaccgaccta
cgtgacctggcccactctgtgttccctgcagggctatatcaggcccagaagtcggagctc
agcggcagcttctgcgtgcagctggactccctactggacattagccagcctgcctatggc
cagcttcagggctggaggggcactgactgcaccaacgaggctgtgtcagccatcacccag
gccacccagcggacctgggaggccaaacccacacgcatgctgctgctgcagctcactgat
ggcgtgcagaccctggaggccatggagtaccagcccatccctgcactcagcaccaccctc
aagccaggagtcaaactgcagctgcagggccaaataacctgccggctaggggtgctactg
ctgaagccaggcaatgtaaaggtgctgggaggggaggtggaggagctgggtgagagacac
tctcaagggaaggtgctatgcagggctctgggactgcctgaggaggagccacagggtccg
gctgagcagccagaggtcccacaaccagttaaccagcaggctgacaaccaggaatcagac
gacctagagctgctggccaacctggagacccaggagaggcaggtggggtggagtgtggaa
cccagcctggagagtggctacaggacccgcagtgaggaatcctctgcctcttacagaaat
gcctcgttgcagagtcggcacattgaaagccttgcagattctctactcgtaacctctccc
catgaggtcattgaactggacaatttggacatcccagatgaggactttgatgaccttccc
ctggatgagcttgatgatatgattttccaggagagcccaatccaactgacaaacgggagg
gataatcaaagagacaacctgaggagaaggcaggaagaagtatctaaccactacgctcca
ccattagatgacatgagaaacgaaagccattttgactcccttgatgagagggatgatcct
gttttggacgaggacatgaactgcttcttcccaccagagccaaaagctcctagacatgag
caaagacgagatagtacctgtgtcagagaactgggaacaggccagccctctgtggcagga
gcagagaggctctcaaccaaaatcccagagagtgcggcgactgtgacgcttgattcatcc
ccgtttacgtacctgtgtttgctgcaacaggttgctgcgggcgcctcaggcctgctggaa
tgcatgagtgaggtgtgcgtgaaagccttcatcgtcaccctgcaagggaacctcaaatgc
agtaagggggagtggctggtcagcgcctccatctctgatggaactggttacatggacgtt
cacctctcagaccaggttctgacgggcctgctggggttctcagcggctgagaagtcgaag
ttagacccagcccggaaggacgcagggatgaaggcgtgtcagcagggcctggtggacatg
tgttgcgtgatgactctgaggttggaccctgccggtgggaaggctgtggtcctcaaggct
gatgcagtcacagaggaggacttccgagccctggaggagagggtgaaaggcaggcgtggg
caggaggactcagggacatggaccagtgaaggctgctga
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