Oncorhynchus kisutch (coho salmon): 109877446
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Entry
109877446 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1-like
KO
K20915
tumor suppressor p53-binding protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109877446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
DUF4537
RTT107_BRCT_5
BRCT
Tudor_2
Motif
Other DBs
NCBI-GeneID:
109877446
NCBI-ProteinID:
XP_031668251
LinkDB
All DBs
Position
Unknown
AA seq
2798 aa
AA seq
DB search
MCSFTAKGGWANEIIGLVVGPPSSYATCHNPMDPSGSDLDSSLPHAENPCLIVEDSQPDS
AALEDDPDSSYRALLARRLSSLQPATSHSPVLELMSSPAGNRYSETDSQSERVQNNNHNG
PVNQEESQVLEVCSNTRRCSTEDMATESGADSTTHCAQPEGGVSKLDFLELSECQGPGDV
VGNSQEEESPTAAQTDSQRHNQPGEQKNTTRGLPSGSQDRKSKRSEVSSSSSSEPLGRAG
RELSVQALLHSQGLQASEDQDPKGDDSELLSSQEDLFDTDKTGTGVDSTMSEAENQGVPT
LTPAHTLRLLHLSGQGTLVQESLSQNSEFVAPTQENLSQTPFIVPNSPTGQENELGADEP
MDTSMPPEDQSDGKEEEPMDMDPAPKSHPSASTPVSQNSPGFVLERTLSLPTQPEFSHDV
FVPTQSQEAGSSSIAPQETHSRKVTSSSQPTALDSSSPKMAAAPTQSKAPTTTDREHSVT
DSFQLELSVNTQSCSLAQQASMQAGGKDVEEDSQATQIEEGLDGRLQIDTSDSVISRNSQ
KRESNGVPSDPKTPAILPKVPQVPDLLKTSGESTRREECNTSQKSDTHKQTTLNVRNMNI
GDDGINVTKTESSQKQDAKASSPSPSSQQKLETIDLFTPSSCVQETPSSSNSAACSLASL
SQSQSQSVFPQMSHVGSVKALSPSPGVCVDSRRDGGGRRDIGEAGGGGSPTSSQKNRDPS
KSIQSLSQERGGTATNSLKEKNKADEEGIEEGGEKQHDSTLGPEGSGLYLSLSQSQVLSP
EPMEEEEEEKIGKFPVSHSRSEGGVGEEESCSSIIVLEESERSSQLLEKEVKSPSNMGTS
QPVASRRGSVSSNGTGSQLKDTQLVPIGLTQADKEGSREAEGLRDKSLSDSSGEIPFHFT
LPKEGELIGPPVSATPPLISQLKQTPRHSTPIDMTSFSEKSAAVGDVSTETAMATSEITA
GESGEDTADGADGKLSLRMKLVTPVEEGSSEHFSLQKPPQSDEEGSVSKVTTVVKAVTRG
ELFSSPSQQKSSQRPSIPSLSLECISLPNSQSEPLSSPRQEVKHMLPLGLREKEPLLNHP
PQAFQQAAAIRQRAVSQQTSFDNTISPSSPSKLCQRVAFQQTSFEAAGPRSPAASGEPET
PPSRAAAGPAHRRHVRTIQEVRTTVTRIITDVYYEAGERWTESEEPVVDSRVLESDISPC
RTGSSMTSGDLGDVSSLSSKASSLQHSSGGTSIVTGPAQRGPEFIMPPSRGAKSARYCMH
AYPQEGEWATAEGPQGSNGRVRVHERESSRTPWVTGLHPIDAPRKSQEGQTSVPLTPVQG
VPGVPRANARGTTVSFLRGMRPYTPCVPTPHIPDSPSDESSPQLGAASWGFRVVANVVQQ
WLLSTSARITKDLGEGRYRLLFDDSYECEVTGKDILLCDPIPLDTEVTALLEDEYFSTGR
VKGYKKEGKDLFYSVEKQGQTTAVEREGQTTAVEREGADEPMDTSMPPEDQSDGKEEEPM
DMDPAPKSHPSASTPDVFVPTQSQEAGSSSIAPQETHSRKVTSSIPTHSTGFKLTQDGAA
PTQSKAPTTTDREHSVTDSFQLELSVNTQSCSLAQQASMQAGGKDVEEDSQATQIEEGLD
GRLQIDTSDSVISRNSQKRESNGVPSDPKTPAICLKFLRRGGRSCSSIIVLEESERSSQL
LEKEVKSPSNMGTSQPVAAGGGSVSSNGTGSQLKDTQLVPIGLTQADKEGSREAEGLRDK
SLSDSSGEIPFHFTLPKEGELIGPPVSATPPLISQLKQTPRHSTPIDMTSFSEKSAAVGD
VSTETAMATSEITAGESGEDTADGADGKLSLRMKLVTPVEEGSSEHFSLQKPPQSDEEGS
VSKVTTVVKAVTSVPVPSPLHSSSVFSRVREAHRQVMEDQAEAHPSDPGTPVRGELFSSP
SQQKSSQRPSIPSLSLECISLPNSQSEPLSSPRQEVKHTLPLGLREKEPPAEPSTPGRPA
VKTPQKGTAAGDREPCGPLEPSTPTRAAAIRQRAVSQQTSFDNTISPSSPSKLCQRVAFQ
QTSFEAAGPRSPAASGEPETPPSRAAAGPAHRRHVRTIQEVRTTVTRIITDVYYEDGREV
DCKVTEESEEPVVDSRVLESDISPCRTGSSMTSGDLGDVSSLSSKASSLQHSSGGTSIVT
GPAQRGPEFIMPPSRGAKSASPRRGSGPQQRGHRGQTAGSEFMRERVQGLHGSRAFTPLT
PRGRARRGRPPSRSPLSRGAGVPRANARGQPLSSSEDEPYTRLCPTPHIPDSPVVPSHSS
TSLLTTISQDESSPAGSSFVGLRVVAKWSSNGYFYSGRITKDLGEGRYRLLFDDSYECEV
TGKDILLCDPIPLDTEVTALLEDEYFSTGRVKGYKKEGKDLFYSVEKQGQTTAVEREGQT
TAVEREGQTTAVEREGQTTAVEREGQTTATTAVERQWYSRSSVILTMEQGNRLREQYGLG
PYEPSTPLAKASDISLDNLVEGKRRRRGITGGASPLTPGPSGKRKLISSEDRDRTPAKRG
RRGGARAGQRVGVCNTSGSGTDLPWDHSDLAETHGPLPQSASLFLGFAFMLTASSESDRQ
TNQTISDGEEEYVQTAPYHKRYTETQLEAGAGFILNDFNEEQCKAAYQSLLITDQHSRTR
KYLLCVASGVPCVSHIWVRDCCKEGKLLNYRNYLLPAGVGPDERIVEWHPRCSPFKALRV
LLVFEEPAELWSELLMMSGASSVRQHQAEKDSSDIPVGKFDVVVTDRTCPPLVLKSVTSQ
DIPMVSPEWLIHSLICGERLGYHSNPQYHHDYTSPPSS
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagttttacggcgaaagggggatgggctaatgaaattattgggctagttgttgga
ccaccaagcagctacgctacctgccataacccgatggatcctagcggaagtgacctggat
tcgagtctgccccatgcagagaacccgtgcctgatcgtggaggactcccagcccgacagt
gcggcactggaggacgacccggacagtagctaccgcgccttgctcgcccgccgcttgtcc
agcctgcagcctgccacctcccacagccctgtactggagctgatgtcctctccggcagga
aaccgatactctgagacagacagccaatcagagagggtccagaacaacaatcacaacggg
ccagtcaaccaggaggaaagtcaagtcctagaagtttgctccaatacaaggaggtgttct
acagaagacatggccacggagtctggggcggactccactacacactgcgcccagcctgaa
gggggagtgtccaagttagattttctggagctttctgagtgccagggtccaggtgacgtg
gtggggaacagtcaggaggaggagagccctactgctgcccagacagacagccagagacac
aaccagccaggtgaacagaagaacacaaccaggggcttgccttcaggcagtcaggacaga
aaatccaagaggtcggaggtgagctctagcagctcgtcggagcccctgggtcgtgctggc
cgggaactgagtgtccaggctttgctccactcccagggcctgcaggcctctgaggaccag
gatcccaaaggggacgactctgagctgctgtcctctcaggaggacctcttcgacactgac
aagacaggcacaggggtggacagcacaatgtcagaggcagagaaccaaggcgtgcccacc
ctgacccctgcccacaccctgcgtctgctgcacctctctgggcagggcaccctggtgcag
gagagcctctcccaaaactctgagtttgtagcacccacccaggaaaacttgagccaaaca
cctttcatcgtccccaattcaccgacaggacaagaaaatgaactgggtgccgacgaacca
atggacacgtctatgcctccggaggaccaatcggatggtaaggaggaggagccaatggac
atggacccagctcctaagtcacacccctcagcatccaccccagtatcccagaactcccca
ggttttgtgttggagaggaccctctctctgcctacccagcctgagttctctcatgatgta
tttgtcccaacccagagccaagaggctggaagcagtagcatagctccacaagagacgcac
agcaggaaagtgacatcatcatcccaacccacagcactggattcaagctcacccaagatg
gccgctgcacccacccagtccaaagcacccacaacaactgaccgagaacactctgtgact
gattctttccaactggagctgtctgtgaatactcagagctgtagtctggcccagcaggct
tccatgcaggctggggggaaggatgtcgaggaggacagtcaggctacacagatagaagaa
ggtctggacggacgcctacagatagacaccagtgactctgtgatttcacgtaacagccag
aagagggaaagtaacggggtcccctctgacccaaaaacacctgctattttgcctaaagtt
cctcaggtgcctgacttactgaagactagcggggaaagtaccaggagagaggaatgtaac
acttcacagaagtctgacacgcacaaacagacaaccttgaatgtacgcaacatgaatata
ggcgacgatggtatcaatgtgaccaaaacggagagttctcagaagcaggatgccaaggcc
tcttccccctctccttcctcccaacagaagcttgaaaccatagacttattcacccctagc
agctgtgtgcaggagacgccttcttcctcgaatagcgctgcctgtagtttagcctccctg
tctcagtctcaatcccagtctgttttcccacagatgtctcacgtgggatcagtgaaggct
ctctctccgagtccaggtgtttgtgtagactccagaagagatggaggaggaaggagagac
ataggagaagcaggaggagggggaagcccgacgagctcacagaaaaacagggacccgtct
aaatccatacagtctttatcgcaggagcgtggaggcactgctaccaacagcctaaaggag
aaaaacaaagcagatgaagaagggatagaggaggggggagagaagcagcacgacagcacg
ttggggcctgagggctcaggcctctatctgtctctctctcagagccaggtgctttctcca
gagcccatggaggaagaagaggaggaaaaaatagggaagttccctgtctcgcactccagg
agtgagggaggagtaggagaggaggagagctgcagcagcatcattgtgctggaggagagt
gagaggagctcccagctactggagaaggaagttaagtcgccgtctaacatgggcacgtct
cagccagtggcaagccggcgggggtcagtgtcgtccaatggcacagggtcacagctgaag
gacacccagctggtaccaatcggactcacccaggctgataaggaagggtctagggaagca
gaggggctccgagacaagagcctcagtgacagctctggagagattccattccacttcact
ctccccaaagaaggcgagctgattggccctcctgtgagtgccactccccctctgatcagc
cagttgaagcagacaccaagacacagcactccgattgacatgacttccttctctgagaag
tccgcggcggtgggtgatgtttccacggagacggcgatggcgaccagtgaaatcacggcg
ggggagagtggcgaggacacggccgacggggctgatgggaaactgagtttgcggatgaag
ctggtgacccctgtggaggagggcagctcagaacacttcagcctgcagaagccaccgcaa
tcagacgaggaaggctctgtctccaaggttaccaccgttgtcaaggctgtaaccagaggg
gaactgttcagctcaccctcacagcagaaaagctcccaaagaccctccatcccctctctc
tccctggaatgcatcagcctccccaacagccaatccgagcccctctccagcccccgccag
gaagtgaagcatatgttgccattggggctcagagagaaagagcctctgctgaaccatcca
ccccaggccttccagcaagccgctgccatcagacagagggccgtgtcccaacagacaagc
tttgacaacaccatctctcccagttcacccagtaagctttgtcagagagtggcgtttcag
cagaccagctttgaagcggctggccccaggtctccagcagccagcggcgagccagagacc
ccaccctcgagggcagctgctggtcccgcccatcgcagacacgtgcggaccattcaggaa
gtgcggacgacggtcacacgcatcatcacagacgtgtactacgaggcgggagagaggtgg
actgagtcggaggagccggtggtggacagccgtgtgttggaaagcgacatctctccatgt
cgcaccggcagctccatgacctccggtgacctgggtgatgtcagctctctgtcctccaaa
gcttccagcctgcagcacagctccgggggcaccagcatagtcacgggtcctgcccagagg
ggccccgagtttatcatgccgcccagccgaggggccaagtctgccaggtactgtatgcat
gcatatccccaggagggggagtgggccacagcagaggggccacaggggtcaaacggcagg
gtcagagttcatgagagagagagttcaaggactccatgggtcacgggccttcaccccatt
gacgccccgcggaagagccaggaggggcagacctccgtcccgctcacccctgtccagggg
gtgccgggggtccctcgtgccaatgcccgcggcaccactgtgtccttcctccgagggatg
aggccctacaccccctgtgtccccaccccgcacatcccagacagccccagtgatgaaagc
agcccccagctgggagcagcttcgtggggcttccgcgtggtggccaacgtggtccagcaa
tggctactttctacttccgcccgcatcaccaaggacctgggcgaggggcgttaccggctg
ctcttcgatgacagctatgagtgcgaggtcacgggcaaggacatcctgctgtgcgacccc
atccccctggacactgaggtcacggcactgctggaggacgagtacttcagcacaggtcga
gtgaagggctacaagaaggagggcaaggacttgttctacagtgtggagaagcagggccag
actacagctgtagagagggagggccagactacagctgtagagagggagggtgccgacgaa
ccaatggacacgtctatgcctccggaggaccaatcggatggtaaggaggaggagccaatg
gacatggacccagctcctaagtcacacccctcagcatccaccccagatgtatttgtccca
acccagagccaagaggctggaagcagtagcatagctccacaagagacgcacagcaggaaa
gtgacatcatcaatcccaacccacagcactggattcaagctcacccaagatggcgctgca
cccacccagtccaaagcacccacaacaactgaccgagaacactctgtgactgattctttc
caactggagctgtctgtgaatactcagagctgtagtctggcccagcaggcttccatgcag
gctggggggaaggatgtcgaggaggacagtcaggctacacagatagaagaaggtctggac
ggacgcctacagatagacaccagtgactctgtgatttcacgtaacagccagaagagggaa
agtaacggggtcccctctgacccaaaaacacctgctatttgcctaaagttcctcaggaga
ggagggagaagctgcagcagcatcattgtgctggaggagagtgagaggagctcccagcta
ctggagaaggaagttaagtcgccgtctaacatgggcacgtctcagccagtggcagccggc
ggggggtcagtgtcgtccaatggcacagggtcacagctgaaggacacccagctggtacca
atcggactcacccaggctgataaggaagggtctagggaagcagaggggctccgagacaag
agcctcagtgacagctctggagagattccattccacttcactctccccaaagaaggcgag
ctgattggccctcctgtgagtgccactccccctctgatcagccagttgaagcagacacca
agacacagcactccgattgacatgacttccttctctgagaagtccgcggcggtgggtgat
gtttccacggagacggcgatggcgaccagtgaaatcacggcgggggagagtggcgaggac
acggccgacggggctgatgggaaactgagtttgcggatgaagctggtgacccctgtggag
gagggcagctcagaacacttcagcctgcagaagccaccgcaatcagacgaggaaggctct
gtctccaaggttaccaccgttgtcaaggctgtaaccagtgtccctgtccccagccccctg
cacagctcctctgtgttcagcagggtgagggaggcccacagacaggtgatggaggaccag
gccgaggcccatcccagtgaccctggaacccctgtcagaggggaactgttcagctcaccc
tcacagcagaaaagctcccaaagaccctccatcccctctctctccctggaatgcatcagc
ctccccaacagccaatccgagcccctctccagcccccgccaggaagtgaagcatacgttg
ccattggggctcagagagaaagagcctcctgctgaaccatccaccccaggccgtccagca
gtgaaaacaccacaaaaaggcaccgcagctggggatagagagccgtgtgggcccctggag
ccatccacccccaccagagccgctgccatcagacagagggccgtgtcccagcagacaagc
tttgacaacaccatctctcccagttcacccagtaagctttgtcagagagtggcgtttcag
cagacaagctttgaagcggctggccccaggtctccagcagccagcggcgagccagagacc
ccaccctcgagggcagctgctggtcccgcccatcgcagacatgtgcggaccattcaggaa
gtgcggacgacggtcacacgcatcatcacagacgtgtactacgaggacgggagagaggtg
gactgtaaggtcactgaggagtcggaggagccggtggtggacagccgtgtgttggaaagc
gacatctctccatgtcgcaccggcagctccatgacctccggtgacctgggtgatgtcagc
tctctgtcctccaaagcttccagcctgcagcacagctccgggggcaccagcatagtcacg
ggtcctgcccagaggggccccgagtttatcatgccgcccagccgaggggccaagtctgcc
agccccaggagggggagtgggccacagcagaggggccacaggggtcaaacggcagggtca
gagttcatgagagagagagttcaaggactccatgggtcacgggccttcaccccattgacg
ccccgcggaagagccaggaggggcagacctccgtcccgctcacccctgtccaggggtgcc
ggggtccctcgtgccaatgcccgcggccaaccactgtcctcctccgaggatgagccctac
acccgcctgtgtcccaccccgcacatcccagacagcccagtggtccccagccactcctcc
acatctctcctcaccaccatttcccaagatgaaagcagcccagctgggagcagcttcgtg
gggcttcgcgtggtggccaagtggtccagcaatggctacttctactcaggccgcatcacc
aaggacctgggcgaggggcgttaccggctgctcttcgatgacagctatgagtgcgaggtc
acgggcaaggacatcctgctgtgcgaccccatccccctggacactgaggtcacggcactg
ctggaggacgagtacttcagcacaggtcgagtgaagggctacaagaaggagggcaaggac
ttgttctacagtgtggagaagcagggccagactacagctgtagagagggagggccagact
acagctgtagagagggagggccagactacagctgtagagagggagggccagactacagct
gtagagagggagggccagactacagccactacagctgtagagaggcagtggtacagccgc
agttctgtcatcctgaccatggagcaaggcaacaggctgagagaacagtacggcctggga
ccctacgagccctccacacccctggccaaggcctctgatatcagcctggataacctggtg
gaggggaagaggagacgcagggggatcacagggggggccagccccctcacccctggcccc
tctgggaagaggaagctgatcagctctgaggacagggacaggaccccggctaagcgaggc
cgcagagggggagccagagccggccagcgggttggtgtgtgtaacacctcaggcagtggc
accgacctgccctgggaccatagtgacctggcggagactcacggcccgctgccccagagt
gcatctctcttcctgggctttgccttcatgctgaccgcatcatcagagagcgaccgccag
accaaccagacaatcagcgatggcgaggaggagtatgtgcagacggccccctatcacaaa
cgctacactgagacccagctggaggccggagcaggcttcatcctcaacgacttcaacgag
gaacagtgcaaggcggcctatcagagcctgctgatcaccgaccagcatagccgaaccagg
aagtacctgctgtgtgtggccagtggcgtgccgtgtgtgtctcacatctgggtgagggac
tgttgcaaggagggcaagctgctcaactacaggaactacctgctgcccgcaggagtgggc
cctgacgagcgcatagtggaatggcatccgcgctgcagcccgtttaaggccctgcgggtc
ctgttggtatttgaggagccggcggagctgtggtctgagctgctgatgatgagtggagct
tcctctgtgagacagcatcaagcagaaaaggacagctctgacattcctgtgggcaagttt
gatgtggtggtcacagaccgcacctgtcctccattggttctgaagagtgtgacatcacag
gacatacccatggtgtcgcccgagtggctaatccacagtctgatctgtggggagcgcctg
ggttaccatagcaacccccaatatcatcatgactacacatccccaccctcatcctaa
DBGET
integrated database retrieval system
