Oncorhynchus kisutch (coho salmon): 109878204
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Entry
109878204 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04260
Cardiac muscle contraction
oki04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109878204
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109878204
04261 Adrenergic signaling in cardiomyocytes
109878204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109878204
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109878204
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
dCache_2
Motif
Other DBs
NCBI-GeneID:
109878204
NCBI-ProteinID:
XP_031641499
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Position
LG1:complement(15888559..16163166)
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AA seq
1078 aa
AA seq
DB search
MMHWAGRIEKELEKTIQLVTGTQQIRGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTS
KRRALERLAREAEQLQTDFPWLDSIKESDMEYYDSKAESDYTEDGDGEENLMENPYSMKL
EFVDDPNFKNKVNYSYSAVQIPTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQV
FGSATGVTRYYPATPWRAPNKIDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKL
MKTSVMEMLDTLSDDDYVNVARFNEKADAVVPCFKTLVQANMRNKKIFKESIMHMQAKGT
TDYKSGFQFAFEQLLNDTGAPRAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFS
VGQHNYDVTPLQWIACANKGFYYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTN
VYQDALGLGLVITGTMPVFNLTADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYT
FAIDQNGYLLLHPNLQPKIINFREPVTLDFLDAELEDSKKEEIRREMIDGKAGQKKIKTL
IKSVDERYIDEAMRTYTWTPVEGTDYSLGLVLPTYSENHIKANLSDQILQVQLQYTKDFE
SLLPNSFESEGHVFIAPREYCNELELSNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLI
LDTGIIRQLVEKVWKTKDLTTYGFLAVFAATDGGITRVFPNKAAETWEEDPEPXNASYYR
RSLDNKGYIFRAPYRTVNDELLNPENDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAW
VDKFKILASNQTSPTSDNRQVQQTCGPTSGCEMDCEANSEDLLCYLVDDGGFLIMSNQKD
HWNKIGMFFSEVDPYLMHALYNNSFYNRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIAD
FVNLAWWSSAAAWSLFQQLLYGMAYHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINS
SYDILQDCGNCSRLIHAKRLNNTNLLFVVAEKMPCNTCEVEKLSQAETEFKEDNPSCEDM
SAARYRKGPAVCYDYNLSENTSDCGRGHSFHPSLQTLLMIQLFLLYPIASPHILPLLL
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgatgcattgggcaggccgcattgagaaggagctggagaagactatacagttggtcact
ggaacccagcagataagagggatttacaatgagaagaagagtcagtttgacatcaagagg
aacaatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagc
aagaggagagccctggagaggctggccagggaggcggagcagctgcagacagattttccc
tggctggacagtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagac
tatacggaggacggagatggggaagagaacctgatggagaacccctactccatgaagctg
gagtttgtggacgatcccaactttaaaaacaaggtcaactactcctacagcgccgtccag
atccccacagacatctataagggctcaccagtcatcctgaatgagctgaactggacccag
gctctggagagggttttcattgataaccgccgggaggacagctctctgcgctggcaggtg
ttcggcagtgccacgggggtcacaagatattacccagccactccatggagagcacccaat
aagattgacttgtatgacgtccgcaggcggccatggtacatccaaggggcatcatctccc
aaggacatgatcatcatcgtggacgtgagtggcagtgtcagtggactcactctgaaactg
atgaagacgtcggtcatggagatgctagacactctgtcagatgacgactatgtgaatgta
gccaggtttaacgagaaggctgatgctgtcgtcccctgttttaagaccttggtccaggcc
aacatgagaaacaagaagatcttcaaggagtctatcatgcacatgcaagccaaaggaacc
actgactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgcc
ccaagggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgca
caggacatctttgagaagtacaactggcccaacaaaacaattagagtatttaccttttca
gttgggcagcacaactatgatgtcacccccttgcagtggatagcttgtgccaacaaagga
ttctactatgagattccatccattggagccatcagaattaacacacaggagtacctggat
gtgctgggtcggcccatggtgctggctgggcccaaggccaagcaggtccaatggaccaat
gtctaccaggatgctctgggtctgggtctggtcataactgggaccatgccagtcttcaac
ctcaccgctgatgcaaattctcagacgcagcttgtccttggtgtcatgggggtggatgtt
gcaatcaacgaaattaagaggaagacaccaacatacaggcttggagccaatggatacacc
tttgcgatcgaccaaaatggctatttgctcctgcaccccaacctgcaacctaagatcatt
aacttcagagaacctgtcaccctggacttcctggatgctgagctagaggacagtaaaaag
gaggagatccgtcgagaaatgattgatggcaaagcagggcaaaagaaaatcaagactcta
attaagtcagttgatgagaggtacattgatgaggccatgcggacatatacctggacacca
gtggagggcacagattacagtctagggctggtactgcccacatacagtgagaaccacatc
aaggctaacctgagtgaccagatcctgcaggtgcagttgcaatacaccaaggattttgaa
tctctgctgccaaacagttttgagtctgaaggacatgtattcatagctcccagggaatac
tgcaacgagctagagctctccaacaacaacactgagttcctgctcaacttcatcgctctc
atggagaaggtgacacctgactccaaacaatgtgacaacctgctccttcataacctcatc
ctggacactggcatcatcagacagctggtggagaaggtgtggaagaccaaagacctcacc
acctatggctttctggcagtgtttgctgcaacagacggagggattacaagagtgtttccc
aacaaggctgctgagacctgggaagaggaccctgagcctnttaatgccagctattaccgc
cgcagtctggacaacaagggctacatcttcagagcgccttatcgcaccgtgaatgatgag
ctgctgaacccagagaacgacaccataggaatcctggtcagcactgcagtggagatcaca
gtgggagggaaaaccatcaaacctgcagtggttggcgtaaagctggaccttgaggcctgg
gtggacaaattcaagatcctggctagcaaccaaacaagtccaacaagtgacaaccgccaa
gtccaacaaacgtgtggaccaaccagtggctgtgagatggactgtgaagccaacagcgaa
gaccttctttgttacctggtggatgacggtggtttcctgatcatgtccaatcagaaggat
cactggaacaagattggcatgttcttcagtgaggtggacccctacctgatgcatgctctc
tacaacaactccttttacaaccggaagcagtcctttgactaccagtctgtgtgtgacccc
gtgccaagcagcaacaccggggctgcaccaagaggagtctttgtgcccaccattgcagac
tttgtgaacctggcctggtggtcatcagcagctgcctggtccctatttcagcagctgctc
tatggaatggcctaccacagttggtttgtcacagatgaggtggaggcagaggggatggac
tccagagagaccagctgtgtgacgatacagactcagttctacttcactaacatcaacagc
tcctatgacatcctgcaagactgtggcaactgttccaggctgatccatgccaagaggtta
aacaacaccaacctgctgtttgtggtggcagagaagatgccctgcaacacctgtgaggtg
gagaaactgtcccaggcggagacagagttcaaggaggataacccatcatgtgaggacatg
agtgcagcgaggtatcgaaaagggcccgctgtgtgctacgactacaatctttctgagaac
acatcagactgtgggcggggccactccttccacccctcactccagaccctcctcatgatt
cagctcttcctcctctatccaatcgccagccctcatattctgccccttctactttaa
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