KEGG   Oncorhynchus kisutch (coho salmon): 109885155
Entry
109885155         CDS       T09179                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X2
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03250  Viral life cycle - HIV-1
oki04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109885155
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109885155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109885155
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     109885155
SSDB
Motif
Pfam: SAM_2 HD SAM_1 PDEase_I HD_assoc_2
Other DBs
NCBI-GeneID: 109885155
NCBI-ProteinID: XP_020332598
Ensembl: ENSOKIG00005046687
LinkDB
Position
LG27:44415029..44459765
AA seq 640 aa
MDRRKRSREDLPTADSDHFNTPEERVYAGLSRDGDLRQWSVEDTCRYLRLEGLGIWEEKF
REQQITGVGLRYLTETHLENMGIGPLGTRLQILHCLRKLWQIAAETKVFNDPIHGHVEMH
PLLVRIIDTPQFQRLRHIKQLGGTYFVFPGASHNRFEHSIGVGYLAGSLVQELNERQPEL
FISRRDILCVQIAGLCHDLGHGPFSHMFDGMFIPKVRPESKWNVTLCVLQHEEASLAMFD
HLVCENALEPAMKAHGLVLPDDLVFIKEQIAGPQNTVPLSQGVSQPASEPWPYKGRPEEK
SFLYEIVANKRNGIDVDKWDYFARDCFHLGIQNNFDYRRFLKFARVCEVDGKKHICTRDK
EVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITEAFLKADPHIQIQGSGGKMFTISTAID
NMEAYTKLTDHMFEQILYSSSSELAEAREILQNITCRRLYKCVGQTQAEKRMEVSQEKLL
DWAGCVARSRPQNDLQNVTLQPGDFVVNIINMDWGMKEKNPIDKVRFYCKNDPTKAYRIR
KDQVSKLLPERFAEQLIRVYCKKTDERTMEAAKKNFVQWCMDMNFSKPQDGDVIAPELTP
LKASWAHNNDSDDNDEEDSQGGRGWDAVNGGQEKAKTRLF
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggataggcgaaagcgctccagagaagatttaccgacagcggacagtgaccatttcaat
accccggaggagagagtttatgccggactgtcgcgggacggggacttaaggcagtggagt
gtcgaggacacttgcagatacctgcgtctggaagggctcgggatatgggaggagaaattc
agagagcaacagataacaggagtggggttacgataccttacagagacacatctggagaat
atgggcatagggcctcttggcacacggctgcagattctgcactgcctgaggaagctgtgg
cagattgcagcagagaccaaggtgtttaatgaccccatccatggccatgtagagatgcat
cctctgctggtccgtatcatcgacacccctcagttccagaggctccgccacattaagcag
ctgggaggaacatactttgtcttccctggagcctcccacaaccgcttcgaacactccata
ggggtaggctacctggcaggttcgctggtccaggagttgaatgagagacaaccagagctc
ttcatctctcgtagagacatattgtgtgtccagatcgccggtctctgtcacgacctgggt
catggtcctttctcccatatgtttgatgggatgttcatccccaaagtgcgtccagaatct
aagtggaatgtcaccttgtgtgtgttacagcacgaggaggcgtccctggccatgtttgac
cacctggtgtgtgagaacgccttggagccggcgatgaaggcccatggcctggtccttcct
gatgacctggtcttcatcaaggagcagattgctggaccacagaacactgtccccctcagc
cagggagtaagtcagccagccagtgagccgtggccatataagggccgaccagaggagaag
tccttcctctatgagattgtggccaacaaaaggaacggcatcgatgtagacaagtgggac
tacttcgccagggactgcttccacctgggtatccaaaataactttgactaccgtcgcttt
ctcaagtttgcccgtgtgtgtgaggtggacgggaaaaagcacatctgcacccgagacaag
gaagtgggtaatctgtatgacatgttccacacacgcaactgcctgcatagaagggcctac
cagcacaaggtgggcaacatcatcgagacaatgatcacagaggcctttttaaaggcagac
ccccacatccagatacaaggttcagggggaaagatgttcaccatctccacagcaatagac
aacatggaggcctacactaaactcacggaccatatgtttgagcagattctgtactcgtca
tcctctgagctggctgaggccagagagatcctccaaaacatcacctgcagacgcctctac
aagtgtgtgggacagactcaggctgagaagcgaatggaggtttcacaggaaaagctcctg
gactgggcaggctgtgtggcgaggtccaggcctcagaatgaccttcaaaatgttactctg
cagccaggggactttgttgtcaatatcatcaacatggactggggtatgaaggagaagaac
cccatcgacaaagtgcgcttctactgtaagaacgacccaaccaaagcttaccggatccgc
aaggaccaggtgtccaagctgctgccagaacggtttgctgagcagcttatcagggtctac
tgtaagaagaccgatgagaggaccatggaggcagctaagaagaactttgtccagtggtgc
atggatatgaacttctccaaacctcaggatggagatgtgattgcaccagagctcacccct
cttaaggcaagctgggcacacaacaatgacagtgatgataatgatgaagaggatagccag
ggaggaagaggctgggatgcagtcaatggtggacaagagaaggcaaagaccagactcttt
taa

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