Oncorhynchus kisutch (coho salmon): 109886113
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Entry
109886113 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04150
mTOR signaling pathway
oki04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109886113
04150 mTOR signaling pathway
109886113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109886113
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109886113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
EGF
cEGF
Gp3-like
Motif
Other DBs
NCBI-GeneID:
109886113
NCBI-ProteinID:
XP_031675950
Ensembl:
ENSOKIG00005043545
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MGAVLRTVLLCSFSLLIRGVPLLLYANRRDLRLVDAAHGRANATVVVGGLEDAAAVDYVY
AQGLVYWSDVSEEAIKCTTFNQSGPGSAAAAQTVVVSGLASPDGLACDWLGRKLYWTDSE
TNRIEVAELDGSLRRVLFWQDLDQPRAISLDPGRGYMYWTDWGEVPKIERAGMDGTNRAM
IIDKEIYWPNGLTLDYSQEKLYWADAKFNFIHRSNLDGTGREVVVKGDLPHPFALTLYEE
TLFWTDWNTHSIHSCQKETGEDRKKVHSDIFSPMDIHVYSQKRQPLLSSPCSVNNGGCSQ
LCLLSPITPHYQCACPTGVQLLEDSKTCRDGPTQLLLLARRTDLRRISLDTPDFTDIILP
TDDIRHAIAIDYDPVDGHIYWTDDDVRAIRRSYLDGSDAQFIVTSQVNHPDGIAVDWIAR
NLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERAD
LDGTERLVMVNTSLGWPNGLALDYTDRMIYWGDAKTDKIEVMCMDGSGRRILVEDKLPHI
FGFTLLGDYVYWTDWQRRSIERVHKHTTEREFIIDQLPDLMGLKATYVHQTFGTNLCAEA
NGGCSHLCLYKPVGVQCACPIGLELIADLSTCIVPEAFLLFSRHTDIRRISLETNNNNVA
IPLTGVKEASALDFDITDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL
GKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDR
SAMDGTGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHP
FGLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACAS
TNGQCSHLCLAVPISSFVCGCPAHFSLNNDNKTCSAPTSFLLFSQKSAINRMVMDEHQSP
DIILPIHSLRNVRAIDYDPLDKQLYWIDSKQNAIRRAQENGNMSMTVVWSQVGGPNLGLQ
PFDLSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDRPRAIVVNPERGYMYFTN
LQERSPKIERAALDGTEREVLFFSGLGKPVALAIDNEVGKLFWVDSDLRRIESSDLSGAN
RIVIEDSNILQPVGLTVFGNHLYWIDRQQQMIERIHKTTREGRTKIQARIASLSDIHAVY
DLDMSEYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQNELSCGEPPTCSPEQFS
CVSGEVDCIPHAWRCDGYPECDDSSDEGDCPVCSDSEFQCDSRQCVDLSLRCNGEVNCQD
RSDENKCEVRCSPDHFSCSSGQCVGKHQKCDHSTDCSDNSDEMGCYPTEEPSSQPTNTIG
SIVGVVMALFVVGAIYLVCQRVLCPQMKDDRETVTNDLVVHGPSVSLGYVPHPASLSGSL
PGMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPQILNPPPSPATVRS
QYTMEFGYSSNSPSTHRSYSYRPYTYSHFAPPTTPCSTDVCDSDYTPGRRAPPTSNSGVA
KGYTSDLNYDSEPFPPPPXPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtgctacggactgtgttgttgtgtagtttttctttactaataagaggtgta
cccctcctgctctatgccaaccgacgggacctgcggctggtggatgcggcccacggcagg
gccaacgccacggtggtggtgggcggtctggaggacgccgccgctgtggactacgtatac
gctcagggattggtctactggagtgacgtcagcgaggaggcaatcaaatgcaccaccttc
aaccaatcagggcccggctcggcggcggccgcccagactgtggttgtatcggggctggcg
tccccggacggcctggcctgtgactggttaggcaggaagctgtactggacggactctgag
accaatcggattgaggtggccgagctggatggatcattacggagagttctcttctggcag
gacctggaccaaccccgagccatctctctggacccggggagagggtacatgtactggacg
gactggggcgaggttcctaagattgagcgagcggggatggacggtacaaacagagccatg
atcattgacaaggagatctactggcccaacggtctcacgctggactacagccaggagaaa
ctgtactgggctgacgccaagttcaacttcatacatcgctccaatctggatggcactggg
agggaggtggtggttaagggagatctccctcaccccttcgctctgacgctgtacgaggag
actctcttctggaccgactggaacacccattccatccactcgtgtcagaaagagaccggg
gaggatcggaagaaagtccactcggacatcttctctcccatggatatacacgtctacagc
cagaagagacagccgctactgtcttcaccatgttctgtgaacaacggaggctgttcccag
ctctgtctcctgtctcctattacacctcactaccagtgtgcctgtcccaccggagtccag
ctgctagaggacagcaagacctgcagagacggtcccacacagctcctcctcctggcccgg
cggactgacctgcgccgcatctccctggatacgcccgatttcactgacatcatcctcccg
acggacgacatccgccacgccatcgccatcgactatgacccggtggacggacacatctat
tggacggacgacgacgtccgggccatcaggaggtcctacctggacggctctgacgctcag
ttcattgtcacctcacaggtgaaccatcctgacggcatcgctgtggactggatcgcccgg
aacctgtactggacggacacgggaacggaccgcatcgaggtgacacgcctcaacggaacc
atgaggaagatcctgatatcagaggacctggacgagccacgagccatcgtactggatcct
gtcgctggatacatgtactggacagactggggcgaggttcctaagattgagcgtgccgac
ctggacgggacggagaggctagtgatggtcaacacctccctgggctggcccaatggtctg
gcgctggactacacagaccggatgatctactggggcgacgccaagacggacaagatagag
gtgatgtgtatggacggttcaggcaggaggatcctggtagaagataagctacctcacatc
tttggcttcactctgctgggggactatgtgtactggacagactggcagagacgcagcatc
gagagggttcacaaacacaccacggagagagagttcatcatagaccagctaccagacctg
atggggctcaaagctacatatgtacaccagaccttcggtaccaacctgtgtgcggaggct
aatggtgggtgtagccacctatgcctgtataagccggtgggcgtccagtgtgcctgtccc
attggtctagagctgatagctgacctgtccacctgcatcgtaccagaagccttcctcctc
ttctcccgacacacagacatcagacgcatctccttggaaacaaacaacaacaacgtggcc
atcccgctgaccggggttaaagaggcgtctgcactggacttcgacatcaccgacaaccgt
atctactggacagatatcacattgaagacaatcagtcgtgcgtttatgaacggcagcgct
ctggaacacgtggtggagtttggcctggactacccagaaggcatggcggtggactggttg
gggaagaatctgtactgggccgacacggggaccaatcgtattgaggtggccaagctggat
ggacagcacagacaggtcctagtctggaaggatctggacagccctcgagccctggcactg
gaccctgctgaggggtttatgtactggacagagtggggtggaaagcccaagattgaccgc
tcagcgatggacgggacgggtcggatcactctggtgcccaatgtgggccgagccaacggg
ctgaccatcgactatgccgagaggcgactgtactggactgacctggacacgacactcata
gagtcctccaacatgctgggtctggagcgtgaggttatagccgacgacctcccccacccc
tttggtctgacccagtaccaggactacatctattggacggactggtctcagcgcagcatc
gaacgggccaataagacatcgggccagaaccgtacggtcatccagggtcacctagactac
gtgatggacatcttggtcttccactcgtcacgccaggggggctggaacgcctgcgcctcc
accaatgggcaatgctcacacctctgtctggctgtaccaatcagcagctttgtctgtgga
tgccccgcccacttctccctcaacaatgacaacaagacctgcagtgcccctacgtcgttc
ctcttgttcagtcagaagtcagccattaaccggatggtgatggatgagcatcagtctcct
gacatcatccttcccatccacagtctgaggaatgtcagggctatagactacgaccccctg
gataaacaactgtactggatcgactccaaacagaacgcaatccgcagagcgcaggagaac
gggaacatgagtatgacggtggtgtggagccaagtgggcggtcctaacctgggcctccag
ccgtttgacctgagcatcgacatctacagccgcttcatctactggaccagcgaggtcact
aatgtcattaacgtgacgaggacagacggcagccgggtgggagtggtgctgagaggagaa
cacgacagacccagagccatcgtggtcaacccagagcgagggtacatgtactttaccaac
ctgcaggaacgcagtcctaagatagaacgagcagcgctcgacgggacagagagagaggtg
ttgttcttcagtggcctggggaagcccgttgccctggccatagacaatgaggtcggcaag
ctgttctgggtcgactcagacctccgacgcatcgagagcagtgacctatcaggagccaat
cggattgtgattgaggactccaacatcctccagccggttggtctgacggtgtttggtaac
cacctgtactggatcgaccgccagcagcagatgatcgaacgcatccacaagacgaccagg
gagggaaggaccaagatccaggctcgcattgcctctctcagcgacattcacgctgtctac
gacctcgacatgagcgagtacagtaagcacccttgtacctgggacaacggaggctgttct
cacatctgtatcgtcaagggagacggaaccacacgctgctcctgtcctgttcatctggtc
ctgctgcagaatgaactctcctgtggagaaccccccacctgttctccagaacagttctcc
tgtgtatccggggaggtggactgtattccccacgcgtggcggtgtgacggctacccagag
tgtgatgacagcagcgacgagggagactgtcctgtctgttcagattcagagtttcagtgt
gactccagacagtgtgttgacctcagcctccgctgcaacggagaggtcaactgtcaggat
cgctcagacgagaacaaatgtgaagtgcgctgctctccggaccacttcagctgttctagc
ggtcagtgtgtggggaaacatcagaagtgtgaccactctacagactgctctgacaactcg
gacgagatgggctgctacccgactgaagagccgtcctcccagcccaccaacaccatcggc
tccattgtgggggttgtcatggcgctgtttgtggtgggcgccatctacttggtgtgccag
cgcgtgctctgtccccagatgaaggatgacagggagactgtaaccaatgacttggtggtc
cacggcccttctgtttctctgggttatgtacctcaccctgcctctctgtccgggtctctg
ccaggtatgtccagggggaagtctgtgattggttcgttgagcatcatgggcgggtccagt
ggccccccttacgaccgcgcccacgtaactggagcctcctcctcaagctcctcctccacc
aagggcacttacttcccccagatcctgaaccctcctccatctcctgcgaccgtcaggtct
cagtacaccatggagtttggctactcctccaacagcccgtcaacccaccgttcatacagt
taccgtccctacacctacagtcacttcgcccctcccacaaccccctgctccacggacgtc
tgcgacagcgactacacccccggacgccgcgccccgcccacctccaactccggcgtcgcc
aaaggttacaccagcgacctgaactacgactcggaacccttccccccaccccccnacccc
cgcagccagtacctgtcagcggaggagaactgtgagagctgccccccctccccctatacg
gagcgctcctactctcaccacctctaccccccgcccccatcaccctgcacagactcctcc
tga
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integrated database retrieval system
