Oncorhynchus kisutch (coho salmon): 109886766
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Entry
109886766 CDS
T09179
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109886766
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109886766
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Crescentin
Gp37
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
109886766
NCBI-ProteinID:
XP_031687460
Ensembl:
ENSOKIG00005011075
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All DBs
Position
LG9:5057164..5089208
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AA seq
900 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFLGSLRALHLLEDLRAALE
MMDQDEREGLRCQVPDTTADGLVEWLQQGQLTNGNGSAMIYQERLSRVESDKECLVLQVS
VLSDQVEVQGEKIRDLDMCLEEHREKLDATEETLQQELLSRSTLETQKLELMTEVSSLKL
KLTTVARDLRDSEGLYQEVNDLRFRVTDMENERLQCEKKLKSTKEELQTLQRQLEELRRL
KDQATQGVLTPDRTDGEKDVDVLRMKRAMESLTSANNDKDRRIEELQESITRYKKVQDLV
KDTLNEDDYDDIQDDRSPSIQVAMDTDRATLAVGEETGRSCDEIPSIAVFSELEQESLIQ
EPDTDSPPEVPPHSAGSLGHINGNTEQTTVEEPSPPSTSPSNPSSNESFGTKKARSSFGR
SFFKMRGGKRTSSAPNLDRSRSASAPTLAETERKGTDHLDLAGAMPHKPQGGDSSQTLPS
SPEAKKKSRGFMKFLGRLKRSHSTSLDLEETEFRRGGVRATAGPRLGWSRDLQHSADDVD
TPFAQWSKEQVCVWLQEQGLGLHVAQAQQWIRSGFTLLQASQHDLEKELGIKQPLHRKKL
QLALQALGSEEDVSKAKLDHNWVTRWLDDIGLPQYKSQFDEGRVDGRMLHYMTVDDLLSL
KVGSVLHHLSIKRAIQVLRLNFYEPNCLRRRPSDENNITPGEISQWTNHRVMEWLRSVDL
AEYAPNLRGSGVHGGVMVLEPRFNVESLALLLNIPPNKTLLRRHLATHFHLLIGSAAQRS
KQECLENPDYTLLTATAKVKPRRLPFGGFGTLRKKRQEDSEEYVCPMDVEMPKNSSFQGG
LRIYEDNLDQMEDSEGAVRQIGAFSEEIDNLTSMLKEDEFFSEVSSRSPEASVTDDDSNV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgacgccagcgagatgttggcagccgccttggagcaaatggatgggatcata
gcaggctccaaggccatggactactccaatgggctgtttgactgccagtcgcccacctct
cccttcctgggaagcctgcgggcgctgcacctgctggaggacctgcgggcggcgctggag
atgatggaccaggatgagagggagggcctccgctgccaggtccctgacaccaccgccgac
ggcctagtggagtggctgcagcagggacaactgaccaacggaaatggctccgccatgatc
taccaggaacggctgtcacgggtggagagcgataaggagtgtctcgtcctccaggtgagt
gttctctcagaccaggtggaggtgcagggggagaagatcagggatctggacatgtgtctg
gaggagcacagagagaaactcgacgccactgaagaaacgctgcagcaggagctgttgagc
aggtccaccctggagacccagaagctggagctgatgaccgaggtgtccagtctgaaactg
aagctgaccactgtggcgagagatctcagggatagtgaggggttgtaccaggaagtcaat
gacctgcggttcagggtgaccgatatggagaatgaaagactgcagtgtgagaagaaactt
aaatccaccaaagaggaactgcagactcttcagaggcagctggaggagctgaggagacta
aaagaccaggctacacagggagtgctgaccccagacagaacagatggagagaaagatgtg
gatgtgctgaggatgaagagggccatggagtccctgacgtcagctaacaatgacaaagac
cggcggatcgaggagcttcaggagtctatcacacggtacaagaaggtccaggacttggtg
aaagacacactgaatgaagacgattacgatgacatccaggatgacagatccccctccatt
caggtcgccatggatacagaccgggccaccctggcagttggagaggagacaggaaggagc
tgtgacgagattccatctattgcagtgttttcagagctggagcaggagagcctgatacag
gaaccagacacagacagtccaccagaagtcccaccacattcagcaggtagcctgggccac
ataaacggcaacacagagcagaccacagttgaggagcccagccccccatccacctcccca
tcaaaccccagcagcaatgaaagctttgggaccaagaaggcccgctcctcctttggacgt
agtttcttcaagatgcgtggaggcaagaggacgtccagcgccccaaatctggatcgcagc
cggagtgcgagtgcgcctacgttggctgagaccgagcgtaagggcacagaccacttggac
ttggctggtgccatgccacacaaacctcagggaggagacagcagccagaccctaccttcc
tcaccagaggccaagaagaagtccagaggctttatgaagttcttaggcaggctgaagaga
agtcactccacctcgctagacctggaggagactgagttcaggaggggaggagtcagagcc
acggccggcccccgactgggctggtcacgtgacctgcagcacagcgccgatgacgtggac
actccctttgcgcagtggagtaaggagcaggtgtgtgtgtggctgcaggagcagggcctg
gggctgcacgtggctcaagcccagcagtggatccgctcaggattcaccctgctgcaggcc
tcccagcacgacctggagaaggagttggggatcaaacagcccctccacaggaagaagctg
cagctggctctccaggcactgggatcagaggaggatgtcagcaaggccaaactggaccac
aactgggtgaccagatggcttgatgatattggtctgccacagtataagagccagtttgat
gaggggagggtcgatggacgaatgctacactacatgactgtggatgacctgctgtctcta
aaggtgggcagtgttctccaccacctcagcatcaagagagccatccaggtcctccggctc
aacttctacgagcccaactgcctccgccgacggccctctgacgagaacaacatcacacca
ggggagatctcccagtggaccaatcacagagtgatggagtggctgagatcagtggacctg
gctgagtacgctcctaacctgaggggcagcggtgtgcacgggggggtcatggtgctggag
cctcgcttcaatgtggagtccctagcccttctgctcaacattcctcccaacaagaccctg
ctgcgccgccacctggccacccacttccacctgctcatcggctccgctgcccagcgcagc
aaacaggagtgtctggagaaccctgactacaccctgctcactgccaccgccaaggtcaag
cccagaaggctgccgttcggtggcttcgggaccctgcgtaagaagcgccaggaggacagc
gaggagtacgtgtgccccatggacgtggagatgcccaagaacagcagcttccaggggggc
ctgaggatctacgaggacaacctggaccagatggaggactcggaaggggctgtgaggcag
ataggagcattttctgaggaaatcgacaacctgacgagcatgctgaaggaggatgaattc
ttcagcgaggtctcctctcgctcccccgaggccagcgtcaccgatgacgactccaacgtg
tga
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