Oncorhynchus kisutch (coho salmon): 109887164
Help
Entry
109887164 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109887164
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109887164
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Other ribosome biogenesis factors
109887164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
109887164
NCBI-ProteinID:
XP_020334227
Ensembl:
ENSOKIG00005005715
LinkDB
All DBs
Position
LG3:76622818..76626614
Genome browser
AA seq
562 aa
AA seq
DB search
MQSVKVGYSVLFTLISKHNYPSSGHFRALACIHGTISSACGVHPISTTAQPVVIRIPRHM
QEQVENVKQVRGKNKVNTIKAGKHLIKSKNPELNQSAGYTLGKFEQHHLSSKGWKHNKSF
GDYFTVNNTQRTPPVVTEIQDEEGDKLKEKSKPITFHNLHLCPDLVEALGKDNITRPTTV
QLQTIPKLLKGYNILCAAETGSGKTLSYLLPVIHKLQAEKAADSESIETTPRTRSVIIVP
SRELADQVSAVARSLCGPFRLMVKTVGGGRGVGNIKLAFTKGPPDVLVATPGALIKALRR
RYLDLGELSFMVVDEADTMFDPSFSGMLESILAQTCVACDPSETHGKMHIKMXTDLFLXV
TDLGSMVTIKSKNLHFLMPHVKQTFLKVRGADKLLELHQALKAAEQDKAGVLVFCNRAST
VNWLGYSMEDMGLRHVRLQGEMPASLRAGIFHSFQKGQVDVLICTDIASRGLDTQRVCLV
VNYDFPESHTDYIHRAGRVGRVGSMEDGEVLSFVTHPWDVELVQKIETAARRRTSLPGME
SSIRKPEPKAAEEEEEEGGLLY
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgtgaaggtcggctactcagtgttgtttacgttgatatcaaaacacaactac
ccgtcctcgggtcatttcagagcactagcatgtattcatggtacaatcagttcagcctgt
ggtgtccatcccatttcaaccacagcgcagcctgtggtcattcgcattcccagacacatg
caggagcaggtagaaaatgtgaagcaagtgagaggcaagaacaaagtcaacaccatcaag
gctggcaagcacctaatcaaaagcaagaacccagaactgaatcagtccgcaggctacaca
cttgggaaatttgagcagcaccatctctcctccaaaggatggaaacacaacaaatcattt
ggtgactacttcacggttaacaacactcagcgtactccacccgttgtcactgaaatccag
gatgaggagggtgacaaactcaaagagaagagtaaacctattacatttcacaaccttcac
ctctgcccggacttagtggaggctttgggcaaggacaacataactcgccctacaaccgtt
caactacaaaccatccccaagctcctgaaaggctataacatcctgtgcgcagctgagaca
ggcagcggcaaaaccctgagctacctgttgcctgtcattcacaaactacaggctgagaaa
gcagcagattccgagtctatagaaaccacacccaggactcgctctgttatcattgtcccc
tctagagaacttgctgaccaggtctcagctgtggccaggagcctgtgtggcccattcagg
ctgatggtaaagacagtgggaggtggaagaggtgtgggcaacatcaagctggccttcacc
aagggtcccccggatgtgttggtggccacacctggtgccctcatcaaggccctgcggaga
cgctatctagacctgggggagctgagcttcatggtggtggatgaggcagacactatgttt
gatcccagcttctctggcatgctggagagcatcctggcccagacctgcgtggcctgcgac
ccctcagagacccatggaaaaatgcacattaaaatgnagactgacttgttcttataggtg
acggacctgggcagcatggtgaccatcaagagcaagaatcttcacttcctcatgccacat
gtaaaacagaccttcctgaaggtgaggggagctgacaagcttctggagctccaccaggcg
ctgaaggcagcagagcaggacaaggctggggtgttggtgttctgtaaccgggcttctaca
gtcaactggctgggctactccatggaggacatggggctgagacacgtccgactgcagggg
gagatgcctgcctccctccgggctggaatcttccactccttccagaagggacaggtggac
gtgctgatctgtaccgacatcgcttcccgaggactggacacccagagggtctgtctggtg
gtcaattacgacttcccagaatcccacacggactacatccaccgggcagggcgggtgggc
cgggtagggagtatggaggatggggaggtgctcagcttcgtcacccacccctgggacgtg
gagctggtgcagaagattgagacggctgcccggaggaggacaagtctgcctgggatggag
tcctccatcaggaagcctgagcccaaagcagccgaagaggaggaggaagaaggggggttg
ctctactag
DBGET
integrated database retrieval system
