Oncorhynchus kisutch (coho salmon): 109889475
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Entry
109889475 CDS
T09179
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109889475
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109889475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
109889475
NCBI-ProteinID:
XP_031687966
Ensembl:
ENSOKIG00005003998
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All DBs
Position
LG1:complement(72216873..72250222)
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AA seq
469 aa
AA seq
DB search
MLMSTDVSSIMLPVSRAIMDRDRELQDTMAGVHPNSTGASGAAVRGMKRGDPASDAQTST
ALVESAGAECKRPRIDASGVVAEVGQNNDPLTLGYHGYPTHSQGSQDSAGGQEGLVPPSF
STFPPPPPPPPQNGLALEYGASLYAAGAIQGSVEAGQAGLNTPTSVPNSLTTHQSDVSSQ
IDTQLVCTGGGGGGGSVGDDSEKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFETSADAEKARAALHGTLVEGRKVEVNNATARVMTNKKMVTPYSNGGE
GLAALPYGLLNANSPTAGWKLSPMVGAMYSPELYTVPGFPYPAAAAQAATAAATFRGAHL
RGRGRPVYGAVRAALPQQAIPTYPGVMYQEGFYGAADLYGGYAAYRYAQPTAVAGPAGAA
AAAAAAYSDGYGRVYTTDPYHAALNPAAAYGVGAMATLYRGGYSRFAPY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtatcatcaatcatgctgcctgtatctcgggctatcatggac
cgggatcgagagctccaggacacaatggccggggtgcaccccaactcgaccggggcttct
ggcgcagctgtccggggaatgaagcgaggagacccagcatctgacgcgcagacgtcgaca
gctcttgtggaatcggccggggcagagtgcaagcgtccccggattgacgcatctggagta
gtcgcagaggtcggccagaacaatgaccccctgacccttggttaccatggatacccaacc
cacagtcagggctctcaggattcagcaggtggtcaagagggtctcgtccccccatccttc
tccaccttcccccctcctccccctccgcccccccagaacggcttggccctggagtacggg
gccagtctgtacgccgcaggggccatccaggggtcggtggaggccggacaggcaggcctt
aacaccccgacaagtgtcccaaacagcttaaccacccaccagtcagatgtgtcgtcacag
attgatacccagttggtgtgtacaggaggaggtggtggcggggggtccgtaggggacgac
tcagagaaggggacccccaaacgcctccacgtctccaacattcccttccgcttcagagac
cctgacctccggcagatgtttgggcaatttggaaagatcctcgacgtagagatcatattc
aacgagaggggatcaaagggttttggctttgtgacgtttgagacgagtgcagacgctgag
aaggccagagccgctctccacggaactctggtggaaggacgcaaggttgaggtcaacaac
gccacagccagggtgatgaccaataagaaaatggtcaccccatattctaatggaggagag
gggctcgcagctctaccttatgggctactaaatgccaactcccctacagccgggtggaag
ttgagtccaatggttggagccatgtacagtccagagctctatacagtccctggcttcccg
taccctgcggcggctgcacaggctgccacagcggcggcgacctttaggggcgcccacctc
cggggtcgtggccggccggtctacggtgctgtcagggcagccctaccccagcaagctata
cctacatacccaggtgtgatgtatcaggaagggttttacggtgcagcagacctctatggt
ggctatgctgcgtatcgctacgctcagccgactgcggtagctggtcctgcaggagcagcg
gctgccgcagcagctgcctacagtgatggctacggacgggtgtacacgacagacccttac
cacgctgcactaaaccctgctgcagcctatggtgtaggagctatggccacactgtacagg
ggaggctacagtagatttgcgccctactaa
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