Oncorhynchus kisutch (coho salmon): 109890037
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Entry
109890037 CDS
T09179
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109890037 (dhx57)
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109890037 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
HA2_C
DEAD
HA2_N
zf-CCCH_4
AAA_22
zf-CCCH
Torus
NB-ARC
AAA_19
nSTAND3
AAA_14
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
109890037
NCBI-ProteinID:
XP_031679572
Ensembl:
ENSOKIG00005021149
LinkDB
All DBs
Position
LG4:complement(78376551..78390529)
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AA seq
1462 aa
AA seq
DB search
MSGRRRGQPNRGGGRFNKPRGGGRGRGGGGGGGGGGGGGGGGGKAASGGWDDGDDFSLDF
GPSRSNRPTSGRGRGGGSGGSSRGRGGRGRSTGGGRGRGGGDRGRGKVNGRGLPKSLISE
RPRPRLLDDDRPRLRPEMMGNMPMQKIFMTNENQEQVKELLRELQTQDYDDEPYDEEEEY
EEEEEYDELDYREEGQFWNTHDEPVESAESPVFDPDSEDERRPTPEPVIGLFAIGKLCRY
GFDRERSKQALETGVGEVGATMEQLLLQVFSERYGPKAVSPDGLQGAPMDECLTQRQEEA
LALTAIYGDRFTERIANSVWTVTLDPDFLADIAGGKQNASARTDNSVQIRDVCSFYLKGA
GCRFGAKCKYKHQMPTKGTSSGPQDPVGASQPGFSSYSSPEYVLEVRFPKGNRYPFQAPV
VAFSTNDETIGAAARLSVTEHLFGEALAAAKEGEPVVYTLITCCEDEATMKELLSVTHHK
YSSLPPVVVAPPPAAVAMTKSKSGRSNTASHVESKSSTNINRTTPTNSTANSSTAPTNRT
SSHRIQQATEDLEEEEDEEGVVVPQTESYVNLRKKMVKRHEERTGSQQKENAKLCREFRT
KQSSRRFTSMLQQRQKLPAWNEKENILDLLDNCQVLVVSGMTGCGKTTQIPQFILDASLS
GPTDQVANIICTQPRRISAISVAERVAQERAERLGNSVGYQIRLETVRSAATRLLYCTTG
VLLRRLEGEADLTGISHVIVDEVHERTEESDFLLLVLKDLMVQRPDLKIILMSATLNADL
FSQYYNNCNTIHIPGRTFPVDQFFLEDAVAKTRYVIEDGSPFMRSGGGKSSSGSKGGRGG
AKDPVDQLGDDMWSFMNLQKKDFIKDSIPDQQLSLQELTVRYKDTKKSVLKTISAMDLDK
INMDLVESVLEYIVDGDHSYPPGAVLVFMPGLAEIKTLYEQLQSNRMFNNRNRARCVVYP
LHSSLSNEEQQAVFKRPPEGVTKIIISTNIAETSVTIDDVVYVVDSGKMKEKSYDASKSM
ESLEESWVSRANALQRRGRAGRVASGVCFHLFTSHCFQHQLAEQQLPEIQRVPLEQLCLR
IKILDVFAERPLDSVFSRLIEPPAMGSLDAAKQRLQDLGALTADEKLTPLGYHLACLPVD
VRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLNYALANSDHLALL
QAYKGWCGAARNGNQAGFQYCRENFLSSRGLQEIASLKRQFTELLSDIGFVKEGLKARVI
ERMAAKGTDGIMEATGREANLNSDNIRLMSAMLCAALYPNVVQVRSPHEKFKQTSKGAVK
MQPKADELRYMTKNDGCVHVHPSSVNYTVRHYDSPYLVYHEKVKTSRVFIRDCSMVSVYP
LVLFGGGQVNVELQKGAFVISLDDGWIRFAAASHQVAELVKELRWELDQLLEDKIRNPSM
DLCTCPRGSRIIHMIVKLITTQ
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagaaggagggggcagcccaacagaggtggagggcgatttaacaagcccaga
ggaggaggaagagggaggggaggaggaggaggaggtgggggaggaggaggaggaggagga
ggaggtggaaaggcagctagtggtggctgggatgacggtgatgatttcagtcttgatttt
ggacccagtcgctcaaacaggcccacctcgggcagaggaaggggtgggggcagcgggggt
agcagcagaggtagaggaggaaggggaaggagcactggtggagggaggggtagaggtggc
ggagataggggtaggggaaaggttaatggtaggggtttacccaaatccctaattagcgag
agacctcggcctaggctgctggatgacgacaggcctcgcctcaggcctgagatgatgggc
aacatgcccatgcagaagatcttcatgaccaatgagaaccaggagcaggtgaaagagctg
ctgagagagctgcagacccaggactacgacgatgagccatatgatgaagaagaggagtat
gaggaagaggaggagtatgatgagctggattatcgggaggaagggcagttctggaacacc
catgatgagcctgttgagagtgcagagagccccgtctttgatcctgactctgaggatgaa
cggcggcccactcccgagccagtcataggactgtttgccataggaaagctctgcaggtat
ggtttcgaccgggagcgcagcaagcaggccctggagacaggtgttggggaggtgggagcc
accatggaacagctgctcctccaggtcttctctgagcgctacggccccaaagctgtctca
cccgatggcctccaaggggcgcccatggacgagtgcctcacccagagacaggaggaggcc
ttggccctcaccgccatctacggcgaccgcttcactgagcgcatcgccaacagcgtttgg
actgtcactttggaccccgacttcctggctgacattgcaggaggaaaacagaatgcgtct
gctcgtaccgacaactccgttcaaattagggacgtctgcagcttctacctaaagggtgcc
ggctgcaggtttggagctaagtgcaagtataagcaccagatgcccaccaagggaacatct
tcgggccctcaagaccctgtgggagccagccaacctgggttcagcagctactcctctcca
gagtacgtgctggaggtccgcttccctaaaggtaaccgctaccccttccaggcccctgtc
gtggccttcagcactaacgatgagaccataggggccgcagccaggctgagtgtcacagag
catctgttcggggaggccttggctgcagcgaaggagggggagcccgtggtctacaccctg
atcacttgctgcgaggacgaggccaccatgaaggagctgctgtcagtcacgcatcataaa
tacagctccctgccccctgtggtagtggctccaccccctgctgctgttgccatgacgaag
agcaagagtgggaggagcaacacggcatcacatgtggagagcaagagtagtacgaacatc
aacagaactaccccaactaacagcaccgccaacagcagcactgccccaactaacagaaca
agcagccacaggatacagcaggccacagaagacttggaggaggaggaggatgaggaagga
gtggtggttcctcaaaccgagagctatgtcaacctgaggaagaagatggtgaagagacat
gaagagaggacagggagccagcaaaaggagaatgccaaactgtgtcgagagttcaggaca
aaacagtcatccaggcgcttcacctccatgttgcagcagagacagaagctgcctgcttgg
aatgagaaggagaacatcctggacctgttggacaactgccaggtgctggtggtcagtggc
atgactgggtgtggtaagaccacccagatccctcagttcattctggatgcatctctgagt
gggcctactgaccaggtggctaacatcatctgcacccagccccgccgtatctctgccatc
tccgtggctgagagggtggcacaggagcgggcagaacgcctcggtaactcagtgggttac
cagatccgcctggagactgtcaggtctgcggccaccaggctgctgtactgcaccacagga
gttctactgaggaggctggagggggaggcagacctcacagggatctctcatgtcatagtg
gatgaggtgcatgagcgcacagaggagagtgacttcctcctgttggtgttgaaggatctg
atggtacagcgaccagatctgaagatcatcctgatgagtgccaccctcaacgctgacctc
ttctcccagtactacaacaactgtaacaccatccacataccaggacgcactttccctgtc
gaccagtttttcctggaagatgcagttgccaaaacccggtatgtgattgaggatggcagt
ccgttcatgcgctcgggcggggggaagtcctcatcaggcagtaagggaggcagagggggg
gccaaagatcccgtggaccagctgggagacgacatgtggtccttcatgaacctccagaaa
aaagacttcattaaagactccatccctgaccagcagctcagcctgcaggaactcactgtc
cgatacaaagacaccaagaagtctgtcttgaagaccatatctgccatggacctggataag
atcaacatggacctggtggagagtgtgctggagtatattgtggacggggaccatagctac
cctccaggtgctgtgttggtattcatgccgggcctggctgagattaagactctttatgag
cagctccagtccaacaggatgttcaacaaccggaacagagccaggtgtgtggtgtacccg
ctccactcgtccctgtctaacgaggagcaacaggctgtgttcaagcggccaccagagggc
gtcaccaagatcatcatctccaccaacatcgctgagacctccgttaccatcgacgacgtg
gtctacgtggtggactcaggcaagatgaaggagaagagttacgacgcctctaagagcatg
gagagcctggaggagtcgtgggtgtcccgtgccaacgccctgcagaggagagggcgagct
ggccgcgtggcctcaggggtgtgcttccatctcttcaccagccactgcttccaacaccaa
ctggcagagcagcagctgccagagatccagagagtccccttggagcagctctgcctcagg
attaagatcctggatgtgtttgcggagcggccattggattctgtgttctcccggctcatt
gagcccccggccatgggcagtctggatgcggccaagcagcgtttgcaggacctgggggct
ctgacggccgacgagaagcttacccctctgggctatcacctggcctgtctgcctgtggat
gtccgcattggcaaactcatgctgtttggtgccatctttcgctgcctggaccctgccctc
accatcgctgccagcctggccttcaagtcccccttcgtgtctccttgggataagagggag
gaggccaatgagaagaagctgaattatgccctggccaacagtgaccatctggccctgctg
caggcatacaagggctggtgtggtgcagccagaaacgggaatcaggccgggtttcagtac
tgcagagagaacttcctgtctagccggggcttacaggagatagccagtctgaagaggcag
tttacagagctgctgtctgatattggcttcgtcaaggagggactgaaggctagagtcatt
gagagaatggctgccaaagggactgatggtataatggaggctacgggccgtgaggctaac
ctcaactctgacaacatcaggttgatgtctgccatgctctgtgctgccctatatcccaat
gtagtacaggtgaggtctcctcatgagaagttcaagcagaccagtaaaggagcggtgaag
atgcagcccaaagcagacgagttgcgctacatgaccaagaatgacggctgtgtccacgta
cacccctcctccgtcaactacacggtgcgccactacgacagcccctacctggtgtaccat
gagaaggtgaagacgagccgtgtgttcatcagagactgcagcatggtgtcggtgtacccc
ttggtgctgtttggggggggacaggtcaacgtggagctgcagaagggcgcgttcgtcatc
tccctggacgacggctggatccggttcgccgcagcatcgcatcaggtggcagagctggtg
aaagagctgcgctgggagttggaccagctcctcgaagataagatcagaaaccccagcatg
gacctgtgtacttgcccgagaggctcccgtatcatccacatgatcgtcaagctcatcacc
acccagtaa
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