Oncorhynchus kisutch (coho salmon): 109890723 Help Entry 109890723         CDS       T09179                                  Symbol lig4 Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     109890723 (lig4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:oki03400]     109890723 (lig4) Enzymes [BR:oki01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      109890723 (lig4) DNA repair and recombination proteins [BR:oki03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      109890723 (lig4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV BRCT_2 DNA_ligase_A_C BRCT RNA_ligase Motif Other DBs NCBI-GeneID:  109890723 NCBI-ProteinID:  XP_020338314 LinkDB All DBs Position LG5:complement(17205221..17209930) Genome browser AA seq 914 aa AA seqDB search MEGTSKSESAAPQNSVAAQVPFLHLCTTLEKIQKTKLRPDKSKFLRDFIDSWRKFHAALH KDNPTTTDSFYPAMRLIVPSFERERVAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRT PTTSQGEAGDFALMTYFVLKKRCTSQGNLTIREVNDFLDSVAINNAGKQKDLVKKSLLHL ITQSTALEQKWLIRMILKDMKLGVSKETVLQVFHLDAAELYNVTTDLNKVCRQLHDPFVS LSEVSIGLFFAFKPMLAAVANMRQVEKQMGNSTFFIETKLDGERIQLHKDGDVYKYFTRN SFEYTQQFGASPLEGSLTPFIHNVFKPHVVKCILDGEMMAYNPTTDTFMQKGSKFDIKRL VDDSELQTCFCVFDVLLVNDHKFGNETLKVRHDNLQTVFTPVKGRIHVVPKTEAKTMQEV VNALNEAIDNREEGIMVKDPSSVYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKG RRGGMMSHFLVAVAEAPEPGEKPSVFHTLCRIGSGYTMKELYDLGLKLAKHWKVYRKNDP PASILCGMERPEVFIDPCNSVIIQVKAAEIVSSEMYKTNCTLRFPRIEKIREDKEWHQCM TLAELDQFRNKASGKLFSRHLRINDNDEPEKKKRKSPAATKPKKAVGVIDHFKSQDLSGV TKETDMFEDVEFCVMNGNEAHPKAELEKAVARCGGIVVQNPGPDTYCVIAAVENMRVKNL ISSDQHDVVWAAWLLECLDRKQVVPWQPRHMIHISPSTKEHFAKEYDCYGDSYFVDTDEQ QLREVFGRIGRVDTLTAQCIAKLEERFSWDDLPTSMFRPFRVYMDRYADIGDPKSIVPAT CLDTRALEFRFHGGTVVQKLEEGVSHVIVVEETRVLALRTLRRLFTKKFKIVRESWVTES IKAGVLQNDNDYLV NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atggagggaacctcaaaaagcgaatctgctgctccccagaactctgtcgctgctcaagtt ccatttcttcacctgtgcaccacgcttgaaaaaatacagaagaccaaactccgaccagac aaatcaaagtttcttcgtgacttcatagactcctggaggaagttccatgcggccctccac aaagacaaccctaccaccacagactctttctacccggccatgcgtctcatagtcccctcg ttcgaaagggagcgtgtggcctatggcattaaagagagtatgttagccaagctctacata gacgtcttgggtctccccaagaatggaccggaagccaacaaactgttgaattaccgcacc cccaccacatctcagggggaggcgggagacttcgctcttatgacctactttgtgttgaag aaacgctgcacaagccagggaaacctcaccatcagagaagtcaacgactttctggactcg gtggccatcaacaatgctggtaagcagaaggacctggtgaagaagagcctgctgcacctt atcacccagagcacggcactggagcagaagtggcttatccgcatgatcctgaaggacatg aagctgggggtcagcaaagagaccgtgctccaggtgttccacttagatgcggccgagctc tacaacgtcaccacagacctaaacaaggtgtgccggcagctccacgacccctttgtgtcc ctcagcgaagtgtccattggcctgttctttgccttcaaacctatgctggccgccgtggcc aacatgcgccaggtggagaagcagatgggcaacagcaccttcttcatagagaccaagctg gatggagagcgcatccagctgcacaaggatggcgacgtctacaagtacttcacacggaac tccttcgagtacacccagcagtttggtgcatcgccgctagagggctccctgacgcctttc atccacaatgtcttcaagccccacgtagtcaaatgcatcctggatggggagatgatggcg tacaaccccactaccgacaccttcatgcaaaaaggaagcaagtttgacatcaagaggcta gtggatgactccgagctgcagacgtgcttttgcgttttcgatgtacttcttgtgaacgac cacaagtttggcaacgagacgttgaaggtgcgccacgacaaccttcagactgtcttcact cctgttaaagggaggatacacgtggtgccgaaaacggaggccaaaactatgcaagaggtg gtaaacgccctcaacgaagccattgacaacagggaagagggcatcatggtgaaagatccc tcatccgtctacaagcccgataagcgaggtgagggctggctcaagataaagccggagtac gttgatggcttgatggatgagctcgacctgttgattgtcggaggctactggggaaaagga aggcgaggtggcatgatgtctcatttcctcgtcgcggtggccgaagctccggagcctgga gagaaaccctccgttttccacacgctctgtcgcatcggttccggctacaccatgaaggag ctgtatgacttggggttgaagctggccaagcactggaaagtctaccggaagaacgaccct ccggcctctattctgtgtgggatggagagaccggaagtcttcattgacccgtgcaactcg gtcatcatccaggtgaaggcagcagaaatagtcagtagtgagatgtacaaaaccaactgc acgctacgcttccccaggatcgagaagatccgggaggacaaagagtggcaccagtgcatg accctagctgagctcgatcagtttcgcaacaaggcgtccgggaagttgttctcgcgccac ctccgcatcaatgacaatgacgagcctgaaaagaagaagcgcaagtcgccggcagcgacc aagcccaagaaagctgtcggcgtcatcgaccacttcaagtcccaggacctatctggcgtt accaaggagacggacatgttcgaggacgtggagttctgtgttatgaatggcaatgaggcg caccccaaggcggagctggagaaagcagtggcccgatgtggcggtattgtagtccagaac ccgggaccggacacctactgtgtgatcgctgctgtggagaacatgcgtgtgaagaacctg atctcttcagaccagcacgacgtagtgtgggctgcctggctgctggagtgcctagacagg aagcaggtggtgccatggcaaccgcgtcacatgatacacatttcaccctccaccaaggag cactttgccaaggaatacgactgctatggagacagctactttgtggacacggacgagcag cagctgagggaagtcttcggtcggattggtagagtggacactttgacggcacagtgcatc gctaagttggaggaacgcttcagctgggacgacctccccactagcatgttcagacctttc agagtctacatggacagatacgcagacataggagaccctaaaagcatcgtaccggcaact tgtctggatacgcgggctctggaattccgcttccacggagggacagtagtgcagaagctt gaggaaggggtctctcatgtcatagtggtggaggaaacaagagtgttggctttaagaacc ctcagacgactctttaccaaaaagtttaagattgttagagagtcatgggtaacagaatct atcaaagcaggggttttgcagaatgacaatgactacctagtgtaa

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