KEGG   Oncorhynchus kisutch (coho salmon): 109891214
Entry
109891214         CDS       T09179                                 
Name
(RefSeq) lysine-specific demethylase 5B-B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oki01009]
    109891214
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109891214
Enzymes [BR:oki01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     109891214
Protein phosphatases and associated proteins [BR:oki01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109891214
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109891214
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2
Other DBs
NCBI-GeneID: 109891214
NCBI-ProteinID: XP_020339168
Ensembl: ENSOKIG00005034882
LinkDB
Position
LG5:complement(52007188..52037392)
AA seq 1491 aa
MTQSRPNEFIAPPECPVFEPTWEEFADPFAYINKIRPIAEKTGICKVRPPKEWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKNLDLYQLNKLV
NDDGGFDVVCRERRWSKIALKMGFAPGKAIGSHLRSHYERILYPYNLFQTGANLLKPTLT
NDTKDTDYIPHDLPQRQSVQPLETCSIARRAKRMRAEGGCMKTETAEDCENRPNLRRRMG
SYVAKPEPQLVLVKPVEVKLELTEHEDPITSDKESVFSKKNDPAVDQYMCLVCGSGSEED
RLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECGKPQVAFGFEQAGRDYSLRTF
GDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIRG
GRFHVSPEDEDYLSSGWNLNNMPVIDSSVLTHVTADICGMKLPWLYVGMCFSSFCWHIED
HWSYSINYLHWGEPKTWYGAPGYAAEKLEGVMKKLAPELFESQPDLLHQLVTIMNPNTLM
NHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPMGRMCVDHYRQLD
RYCVFSHDEMVCKMASKADTMDVALASAVQKDMAVMLQEEDQLRDKVSKMGVQQSQQVEY
DLLPDEERQCSRCRTTCYLSALTCPCNPGQLVCLHHAQDLCSCPPNNLTLNFRFTMAELY
PMMEAVTLRAESYTGWVSHVTNILEAKQDKKSSLEVLRSLVEDAEVKQFPQNDLLRQLCA
VTLDAEKCAVVAQQLLNGKRQTRYRSGGGKSQSQNLLTVEELRSFVRQLHKLPCSIRQAP
LLKDLLTRVDDFQQRSERLLCDEAPSPAELQSLLDVSLSLDVELPQLSLLRERLEQARWL
EVVQGASSQPHSLCLDTMRRLIDQGVGLASHALVERAMARLQELLTMSEHWEERALSLME
TRPCHCVETLEAALQEVASIPAYLPNCLLLKDTVDQAKDWLQEADTLQLGGRIPVLDTLT
DLVSRAKTIPVWLDPLARLEALVSDVQAWKESAAKTFLMKNSPYSLLEVLCPQCEAGTGS
QKSKSKRAKDVAQCNKRNGTWLDCLSDVEKALSESKDSASAMATLAEVRQKEMENLLALR
ASNESKLLQAGDCGALRVCVCHNAPLGAMLQCELCSDTFHRSCVSGSNQDPRPNQAWLCP
HCRRSEKPPLDRVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRMQQASAEGVLGVAL
MTSHQRWGSSSPTSAPSQEPYSASFYTDHQCIPLQGLSPELEELMVEGFLLQVTLPETQQ
LYMSLSRLDSHNLTDSPSPKHSTEQDQHQHNPQGGSPPHNQNGVACLKKEAVNGKRTKRC
MEKEGSERKDKAKKPCKKKPKMNKERSQETKGTCSPTATHSDLSLSDSDEDFTLCAAPWC
REPEGKQVNWVQCDGSCQQWFHQICVGVSAEQAEKEDYICISCTQPDHTRE
NT seq 4476 nt   +upstreamnt  +downstreamnt
atgacccaatctcggccaaacgagttcattgctccaccggagtgtcctgtttttgagccc
acttgggaggaatttgccgacccatttgcgtatatcaacaaaatacggcctattgcagag
aaaactggcatctgcaaggtccgaccgccgaaggaatggcagccaccgtttgcgtgtgat
gtggacagactgcacttcactccccggatccagagacttaatgaattggaggctcaaacc
agagtcaagctcaacttcctggatcaaatcgcaaagttctgggagctacaagggtgcacc
ctgaaaatccctcatgtggaaagaaagaatctggacctgtaccaactcaacaagttggtg
aacgatgatgggggatttgacgtggtttgcagagagagacgctggtctaagatagcccta
aagatgggctttgctccaggcaaggccataggctctcatctgcgctctcactatgagagg
atcctctacccctacaacctgttccagactggagccaaccttctgaagcctaccctgacc
aatgacaccaaggatacggactacatccctcatgacctgccccagcgccagtctgtccag
cccctggagacttgcagcatcgctcgcagagccaagcgcatgagagctgagggaggctgc
atgaagactgagacagcggaggactgtgagaaccggcccaacctgaggaggaggatgggt
tcctatgtggccaagccagagccacagcttgtgctagtgaaacctgttgaggtgaaactg
gaactcactgagcacgaggatccaataacaagtgacaaagaaagcgtgtttagtaaaaaa
aacgaccccgcggtggatcagtacatgtgtctggtgtgtggcagcggtagcgaagaggac
cgcctgctgctgtgtgatggctgtgatgacagctaccacaccttctgtctgatcccgccc
ttgcatgatgtccccaaaggagactggagatgccccaagtgcctggctcaggagtgtggc
aaaccccaggtagcctttggcttcgagcaggctggcagggactactctctacgcactttt
ggggacatggctgactccttcaagtcagactatttcaacatgccagttcatatggttccc
acagagctggtggagaaggagttctggcgactggtcagcaccattgaggaggacgtcact
gtggagtacggagcagacattgcctccaaggagtttgggagtggcttccccatcaggggt
ggacgattccatgtctcccctgaggatgaggattacctgagcagtggctggaacctgaac
aacatgcctgtgatagactcctcggtgctgactcatgttacggctgacatctgtgggatg
aagttaccctggctgtatgtgggcatgtgcttctcctccttctgctggcacattgaggac
cactggagctactccatcaactacctgcactggggagagcccaagacgtggtacggcgct
ccggggtatgctgcggagaagctggagggggtgatgaagaaactggcccccgagctgttc
gagtctcagcctgacctcctgcaccagctggtcaccatcatgaaccccaacacactcatg
aaccacggtgttcctatctatcgcaccaatcagtgcgctggcgagtttgtcatcactttc
cctagagcctaccacagtggatttaaccagggcttcaactttgctgaggctgtcaacttc
tgcaccatggactggatgcccatgggccgcatgtgtgtggaccactaccgacagctggac
aggtactgtgtcttctcccacgacgagatggtctgcaagatggcgtccaaggcagacacc
atggacgtggccctggcctcggccgtgcagaaggacatggccgtcatgctccaggaggag
gaccagctgagggacaaagtcagcaagatgggcgtgcagcagtcccagcaggtggagtac
gacctgctgccagacgaggagcgccagtgttccaggtgcaggaccacctgctacctgtct
gccctcacctgtccctgtaaccctggccagctggtgtgtctgcaccacgcccaagacctc
tgctcctgcccccccaacaacctcacactcaacttcaggtttaccatggctgagctctac
cccatgatggaagcagtcactctgcgtgccgagtcctacacaggctgggtctcgcatgtc
actaacatactggaggcgaaacaagacaagaaaagcagcttggaggtgctgaggtcactg
gtggaggatgcggaggtgaagcagttccctcagaatgacctcctacggcagctctgtgct
gttaccctggatgctgagaagtgtgccgtggtggcccagcaactgctcaatgggaaaagg
cagaccaggtatcgttcaggtggagggaagtcccagagccagaacctgttgacggtggag
gagctcaggtcgtttgtcaggcagctgcacaagctgccctgcagcatccgccaggccccc
ttactcaaggacctgcttacccgcgtggatgacttccagcagcgcagcgagaggctcctc
tgtgacgaggcccccagcccagcggagctgcagagcctgctggacgtgagcctgagcctg
gatgtggagctgccccagctaagcctgctcagggagaggctggagcaggcgcgctggctg
gaggtggttcagggggccagcagccagccccacagcctctgtctggacaccatgcggagg
ctgatagaccagggggtgggtctggcctcgcatgccttggtggagagagccatggcgcgc
ctgcaggaactgcttacaatgtctgagcactgggaggagcgggctctcagcctgatggag
accaggccctgtcactgtgtggaaactcttgaagcagctctgcaggaggtggctagtatc
cctgcttatctgcccaactgtctgctgctgaaggacacggtggaccaggctaaagactgg
cttcaggaagcagacaccctgcagctgggaggccgtatccctgtgctggataccctgact
gatcttgtgtcccgggccaagaccatccctgtctggctggaccctctggctcgactggag
gccctggtctctgacgtgcaggcctggaaggagagcgccgccaaaacctttctaatgaag
aattccccttactccctgctggaggtgctgtgcccccagtgtgaggctggaacggggtct
cagaagtcaaagtctaaaagggcaaaggatgtggcccagtgcaacaagagaaatggaact
tggctggactgcctgagtgatgtggagaaggccctctcagagagcaaggactccgcctct
gctatggccactctagccgaggtacgtcagaaggagatggagaatctgctggctctcagg
gcctccaatgagtccaagctcctccaagcgggcgactgcggggcgttgagggtgtgcgtg
tgccacaatgccccgttgggcgccatgctgcagtgcgagctctgcagtgacacctttcac
cgcagctgtgtctcaggctccaaccaggacccccgacccaaccaggcctggctgtgtccc
cattgccggcgctctgaaaagccacctctggaccgggtgcttcccctgctcgcctccctg
cagcgcatcagggtgcggctgcctgagggagatgccctacgcttcctcatcgagaggaca
gtccgctggcagcaccgcatgcagcaggcctccgcagagggggtgctgggagtggctctg
atgacatcacatcagcgctggggctcatccagtcccacctcggctccatctcaggaacca
tacagcgcatcattttacacggatcaccagtgcattcctctgcagggactgagccctgag
ctggaggagctgatggtggagggcttcctgctgcaggtgactctgcctgagacccagcag
ttgtacatgtccctcagcagactggactctcacaacctcacagacagcccctctcccaag
cacagcacagagcaggaccaacaccagcacaaccctcagggagggagcccccctcacaac
cagaacggagtagcctgtctcaagaaggaggctgtgaacggcaagcggaccaagcggtgc
atggagaaggagggctccgagcgcaaggacaaagccaagaagccctgcaagaagaagccc
aagatgaacaaggagaggagtcaggagaccaaggggacctgttcacccaccgccactcac
tctgacctctccctttcggactctgatgaagacttcaccctgtgcgctgcaccgtggtgc
agagagccagaggggaaacaggtgaattgggtccagtgtgatggcagctgccagcagtgg
ttccaccagatctgtgtgggagtgtctgcagagcaggcagagaaagaggactacatctgt
atcagctgcacacagccagaccacaccagggagtga

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