Oncorhynchus kisutch (coho salmon): 109891354
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Entry
109891354 CDS
T09179
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109891354
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109891354
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109891354
03036 Chromosome and associated proteins [BR:
oki03036
]
109891354
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109891354
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
109891354
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
109891354
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109891354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
109891354
NCBI-ProteinID:
XP_031681405
Ensembl:
ENSOKIG00005023571
LinkDB
All DBs
Position
LG5:complement(59717752..59734235)
Genome browser
AA seq
744 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCPSPVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRMKTFTK
GFGPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVK
YESKLEILKRNRQMVLEGLQQLIRVTQPELVQDRKKPDSSPSDDTPPTIKKEEADPQPVT
SQGAEQTPPTNTAAQSQLVPSSSGKGKAMGKPAAPLGGAGTSQPVTSPIAPRLPAFLDNH
NYAKSPMQEDEDLATGVGRPRVPGAPQPPYSDDDDYEDEEEEELGTPTRFRRKGVLRSRT
GRVGGGSGVETKLALGVLAEKLKKEVQRKDSLATPLSVRTEGRTGGIVITAASQPSPTPS
NESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEGLLRLDARQNRAV
RELGPSVSTALLHLQEDGVIYTVPPPADTALEEKKAGAPEKVKEQGSNPAVEGDGVKEEG
KEGPSVEVKEEEIRDATEVKPSMEKVISTETVGSNKPSGEKYSPKELLALLKCVEADIAN
YEVFLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVS
IGRLHKQRKPDRRKRSRPYKAKRQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtggctggagctcgagagtgacccggggctgttcacgctcttggtggag
gattttggtgtgaagggggtccaggtagaggagatatacgacctacaaagcaagtgtcca
agccctgtgtatggcttcatcttcctgttcaagtggatcgaggagcgaaggtctaggagg
aaagtctccactttggtggatgagacctctgtcattgatgatgacattgttaatgacatg
ttctttgcccaccagctgatcccaaactcctgcgccacccatgcacttctgagtgtgctc
ctgaactgtagtggggttgagttgggcactaccctcagtcgcatgaagactttcactaaa
ggcttcggcccagagagtaaaggctacgccattggaaatgccccagagctggctaaagca
cacaacagccatgccagaccggagcccaggcacctgccggagaagcagaacgggattagc
gccgtgcggaccatggaagcattccactttgtcagctacgtgcccatcaaagaccgcttg
tttgaactagacggcctcaaggcatacccaattgaccacgggccatggggagaggaggag
gagtggacggataaggcacggcgggtcattatggagaggattggcttggccacggctgga
gagccctaccatgatatccgcttcaacctgatggcagtggttccggaccgcagggtgaag
tatgagtcaaaactggagatcctgaagaggaacagacagatggtactggaaggtctacag
cagctgatccgggtcacccagccagagcttgtacaggacaggaagaagccagactcctcc
ccctcagacgacacaccccctactatcaaaaaagaagaggcggaccctcaacctgttaca
tcacagggggctgagcagactcctcccacaaacacagcagcccagtcccaattggtcccg
agctcctcaggcaaggggaaagccatggggaagccagctgccccattggggggagcgggg
acctcccagcctgtcaccagccccatcgcccctcgcctaccagccttcttggacaaccac
aactacgccaagtcccccatgcaggaggatgaggatcttgcgacaggggtgggtcgtccc
agggtgcccggtgcgccccagcccccctactctgatgacgatgactatgaggatgaagag
gaggaagagcttggcacaccaaccaggttcaggcgtaaaggggtgctgcgttcccgtaca
ggccgtgtcgggggaggcagcggcgtagagaccaagctggcactcggcgtcctggccgag
aaactcaagaaggaagtccagaggaaggactctctggccacgcccctctccgtccgtacc
gagggccgcactgggggcatcgtgatcacagccgcctcccagccctcgcccacacccagc
aacgagagcaccgacaccgcctcggagatcggcagcgccttcaactcaccactgcgctcc
ccggcccgctcccaggcggccacgcggccctccagccctgtggcatcccacctgtcccgg
gtattgtttggggaggatgagggtctgctgaggctggatgccagacagaaccgggcagtc
agagagctggggccctccgtcagcaccgccctgctgcacctacaggaggacggggttata
tacactgtaccaccacccgctgatacagctcttgaagagaagaaggcaggtgctccagag
aaggtaaaagagcaaggtagcaatccagcagtagagggggacggagtgaaggaggagggg
aaggagggaccatcggtggaggtgaaagaggaagagatcagagatgcaacagaggtcaaa
cccagcatggaaaaggtcatctccacagaaactgttggaagcaacaagccatctggggaa
aaatactctcctaaagagctgcttgctctgctcaagtgtgtggaggccgacatcgccaac
tatgaagtgtttctaaaggaggaggtggagaagaggaaaaaatacaagattgatgaccag
aggaggacccataattatgacgagttcatctgcaccttcatatccatgctggcacaagaa
ggcatgttggccagtctggttgagcagaatatctctgtgcgtcgtcgccagggagtgagc
atcggacgtttacacaaacagaggaaaccagaccgcaggaaacgctcgcgaccctacaag
gccaagcgccagtga
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integrated database retrieval system
