Oncorhynchus kisutch (coho salmon): 109892347
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Entry
109892347 CDS
T09179
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00310
Lysine degradation
oki00514
Other types of O-glycan biosynthesis
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109892347
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109892347
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109892347
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
109892347
Glycosyltransferases [BR:
oki01003
]
O-Glycan biosynthesis
O-linked Gal type
109892347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
109892347
NCBI-ProteinID:
XP_031682075
Ensembl:
ENSOKIG00005041060
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All DBs
Position
LG6:complement(13327717..13347233)
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AA seq
590 aa
AA seq
DB search
MFLWVLVLGAFVSRSECYFSEEKYPEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKARISVWAATDHNADNTTAVLREWLTVMQQFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKTRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHLDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSISFSHLILEATIDG
PPMAPSKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVIRLMEEVEMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNRNLQAFSTRPLLVQPAQ
YAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQPDMLQTSYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttaggggccttcgtttctagatcagaatgttacttttcg
gaggagaaatatccagaagaatcgaaaatgcagccgccaacggttgttattgcgatcatt
gctcggaacgcggcgcattccttgccttactacctcggagcattggagagactgaactat
cccaaagcacgcatttctgtttgggcagcgacagatcacaatgctgacaacactacagct
gttctgagagaatggctgacagtcatgcaacagttttatcactacgtggaatggaggcct
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaacttaaacaggctgctctcaacttcgccaagacacgctgggct
gactacatactgtacgctgacacagacaacatcctgaccaacccagagactctgaacctt
ctgatagcagagaacaagtctgttgtggctcccatgctggactctcagggagcctactcc
aactactggtgcggcatcactccccaaggttactaccggcgtacagctgagtatttcccc
accagacagcgccaccggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggtatgaagaagctggccttccaccctcctcacctggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgccgcgtctcagaggtgcag
atgtacctgtgtaacaaggtgaggtatggttacctgaacgtcccagccaagcctcaccac
accatagaagacgacagcatcagctttagtcatctcatcctggaggccaccatcgatggc
ccccccatggccccctccaaatacgtgagcctcttccccaaacagagagacctcatgggc
ttcgatgaggtgtacctgattaacctgcggcgtcgtcaggaccgtagagacaggatgctg
tattctctcaatgagctggagatagatgtcaaggtggtggacgccatcgatggaggagct
ctgaacagcagtgatataaagattctgggagtggacatactgcctggttactatgacccg
ttctctcgccgtaccctgaccaaaggagaggtgggatgcttcctgagtcattactacatc
tggaaggagatggtagaccagcagatggacaaggcgctgatctttgaggatgacgtgcgt
ttccaggccaacttcaagcggcgcgtaattcgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccaggtgatgaggaggtg
gtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctatgcc
atctctctccagggtgcccagaaactgctcaacgctgaacccctctccaagatgctgccc
gtcgacgaattcttacccatcatgtacgacaaacacaccaatgagaactacaagtcccac
tatcctaaccgtaacctgcaggcgttctccacacgccccctactggtgcaaccagcccaa
tatgccggggaccccaagtgggtgagcgacacagagacctccacgttgtgggacgacgac
aacgtgcgaacagactggaggggctcccacaagacgctgaagggggctccccaacccgac
atgctgcagacgtcatataaagatgagctgtag
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