Oncorhynchus kisutch (coho salmon): 109895255
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Entry
109895255 CDS
T09179
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109895255
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109895255
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109895255
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109895255
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109895255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
109895255
NCBI-ProteinID:
XP_031686742
Ensembl:
ENSOKIG00005037161
LinkDB
All DBs
Position
LG8:complement(65337136..65359528)
Genome browser
AA seq
1392 aa
AA seq
DB search
MEMVPSEENQLVPKEAMFWSCRQSIFDEMKKRFSQIENAAEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTLPKLFEDVAHKAGYVNGTFDLAWRKTGDMGSLDPSSEMSLTEFGFEPGK
RNFLQLTDKDGEQPQIASDESGTAGSSGLDDSSQERFIGPLPRDCTVGCSSDYSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFLLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQF
SPLTADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQA
FVQPETLDGANQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM
SFPEELDMSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSADDGVDEGICLDSA
SSTERVLKPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQEDI
RKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCDDFPEHIKHLVQREKES
EEQEKRQREIERNTCKIKLFCMHPVKMMAMMENKLEVHKDKTLREATEMAYKLMELDGVV
PLDCCRLVKYDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPEQVFQPYKP
GEVMVKVHVVDLKTDTVAPPVSIRAYLNQSITEFKQLIAQATELSAETMRVVLERCYNDL
RLLYVPNKTLKSEGFFRSNKVFVESSESPDHQVTFTDSLLWKLLDRHGNTIRLFVSLPVQ
SPGTNRTICQKVGGDPEECSEGSKGNRNSVETILEESTEKLKNLSLQPQQGSSTSDSQKS
SDTSDFEQIESPSPSQEPDSSSVSAVVAVDNRELENRIRVASGGGAYSDPETQLPGEERS
DSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANEGKKE
TWDTAEEDSGTDSEYDENGKSKAESYYLYFRAEPYAQEDGSGEGGQKCILVHVDKRITLS
AFKQNLEPFVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEY
RVKVYQLLVNDAEPCKFLIDTVFAKGMTVKQSKEELMPQLKDQCKLDLNIDKFRLRKKTW
KNPGTVFLDYHVYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTPAQMKLEPFQ
EVVLESSSVEELKEKLSEISGVPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNV
WPLYICDDGAVVFYRDSTEEPMEQSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIY
LDGGPVKDPGQD
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaccgaaagaggctatgttttggagt
tgcaggcagagtattttcgatgagatgaagaagaggttttctcagatagagaatgcggcg
gaggagcccagagtgctgtgcatagtccaggacactaccaatgctaagacagtcaacgag
aggctcaccctcaacttgccagcctccaccacccttcccaaactcttcgaggatgtggcc
cacaaggcgggctatgtgaacggcacctttgacctggcatggcgcaagacaggggacatg
ggttcgctggatcccagcagtgagatgtccctcactgagttcgggtttgagcccgggaag
aggaacttcctccaactcacagacaaggacggagaacagcctcagattgcatcggatgag
tcggggacagcgggcagcagtggtctggatgacagctcccaggagcgcttcatcggccct
ctgcccagagactgcacagtgggctgcagcagcgactacagcagccccagctactcctac
tcctccatcctcaacaagtctgacacaggatatgtgggtttggttaatcaggccatgacc
tgctatttgaacagccttctacaaacactgtttatgaccccggagttcagaaatgcactg
tacaactgggagtttgaggagtcggaggaagacccggttaccagcatcccttaccagcta
cagaggctgtttttgctgctgcagaccagtaagaagagggccatcgagaccaccgacgtg
acccgcagcttcggctgggacagcagcgaagcctggcagcagcatgacgtccaggagctg
tgtagggtcatgtttgatgccttggagcagaaatggaagcagacagagcagcagcagttt
tctccacttacggctgacctgattaaccagctgtaccaggggaagctgaaggactatgtg
cgctgtctggagtgtggctatgagagctggaggatcgacacctacctggacatccctctg
gtcatcagaccatttggggcaagccaggcttatggcagcgtggaggaggctctgcaggcc
ttcgtccagccagagactctggacggggccaaccagtacttctgtgagcgctgcaagaaa
aaatgtgatgcccgaaaggggctgagatttctgcactttccctacctgctgactctgcag
ctgaagcgttttgactttgactacaccactatgcaccgcatcaaactcaacgaccgcatg
tccttccctgaggagctggacatgagtcccttcattgacgtggaggacgagaaatctcct
caaacggagagctgcactgacagcggggcagagaatgaaggcagttgccacagcgaccag
atgagcaacgacttctcggcggacgacggtgtggatgagggcatctgcctggacagcgcc
agcagtactgagagggtcctgaagccaaagagttcattgacctttgagctgttctcggtc
atggtgcattcgggcagcgctgcaggtggccactactatgcctgcattaagtccttcagc
gatggccagtggtacagtttcaatgaccagcacgtcagcaagatcacccaggaagacatc
aggaaaacgtatggagggtcctcggggagcagaggctattactccagtgcctttgccagc
tctacgaatgcgtatatgctgatttataggttgaaagacccctcaaggaatgcaaagtat
ctggattgtgatgacttccctgagcacataaagcatctggtccagagggagaaggagtct
gaggagcaggagaaaagacagagggagattgagcgcaatacctgcaagatcaagctgttc
tgcatgcatccggtgaagatgatggctatgatggagaacaagctggaagtgcacaaagac
aagacgctcagagaggcaacagagatggcctacaagctcatggaactggatggggtggtc
ccgctggactgctgtcgcctggtcaagtacgatgagttccatgagtacctggagcgctcg
tacgagggtgaggaggacacccccatggggctgctgctgggcggggtcaagtcctcctac
atgtttgacctgctgctggagacgcgcagaccagagcaagtcttccagccatacaaaccc
ggagaggtgatggtgaaggttcacgtggtggatctgaagactgatactgttgcccctccc
gtcagcatcagggcctacctaaaccagtcaatcactgagttcaagcagctcattgcacag
gccacagagctctcagctgaaaccatgcgtgtggtcctggagcgctgctataatgacctt
cggcttctctacgtgcccaacaagacattgaaatcagagggtttcttcaggagcaacaag
gttttcgtggaaagctctgaatccccagatcaccaggtcactttcactgattccctcttg
tggaaactgctggatcgccatgggaacacaatccgcctgtttgtctcgctccctgtgcaa
tcccctggcaccaacagaactatttgccaaaaagtgggcggcgatcctgaggagtgctct
gaggggtcaaagggcaacaggaattctgtagagaccatcttggaggagagcacagagaag
ctgaagaacctgtccctccagccgcagcagggctccagcaccagtgacagccagaagagc
tcagacaccagtgacttcgaacagatcgagtccccctcaccttctcaggaaccagactcc
tcctccgtatccgctgtcgttgcagtcgacaaccgagagctggagaaccggatccgggtg
gccagcggcgggggggcctactccgacccggaaacccagttacctggggaggagcgctcg
gactctgaggtgaacaacgatcgcagcactagctcagtggacagtgacatcctgagctcc
agccacagcagtgacacgctgtgcaacgccgacagcggccccatccagctggccaatggc
ctggactcacacagcatcaccagcagccgccgctccaaggccaatgagggcaagaaggag
acgtgggacacagccgaggaggacagtggcacggacagcgagtatgatgagaatgggaag
agcaaggcggaatcctattacctctacttcagagcagaaccatatgcacaggaggacggc
tctggggaaggaggccagaaatgtatactggtccacgtggataagaggataactctgtca
gcgttcaaacagaacctggagcctttcgtgggtgtcacctctacccagttcaaggtgttc
cgcgtctacgccaacaaccaggagtttgagagtgtacggctcaacgagaccctctcctcc
ttctctgacgacaacaagataaccattcgattaggcagagcactgaagaagggcgagtat
cgggtgaaagtgtaccagctactagtgaatgatgcagagccctgtaagttcctcatagac
acagtgtttgctaagggcatgactgtgaaacagtccaaagaggagctaatgcctcagctg
aaagaccaatgcaagctggacctcaacatcgacaagttccgtctcaggaagaagacgtgg
aagaacccagggacagtgtttctggactaccacgtctacgaggaggacatcaacatctcc
agtaactgggaggtgtttttggaggttctagatggaccggagaagatgaagtccatgtcc
cagctggctgtgctgacccgccgctggacccccgcccagatgaagctggagcccttccag
gaagtggttctggagagcagcagtgtggaggaactcaaggaaaagctcagtgaaataagt
ggtgttcctcttgaaaacctggagtttgccaaggggcgaggaacatttccttgtgatatc
tcggtattggagatccatcaggatctggactggaaccctaaagtgtccactctgaatgtg
tggcctctgtacatctgtgatgatggtgctgtggtcttctacagggacagcacagaggag
cctatggaacagtctgaagacgaacgcaatgagctgatgaagaaggagagcagccggctg
ctgaagactggccaccgggtcagttactcacctcgtaaggagaaggcccttaagatctac
ctggatgggggcccggtcaaggacccggggcaggactga
DBGET
integrated database retrieval system
