Oncorhynchus kisutch (coho salmon): 109896846
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Entry
109896846 CDS
T09179
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04814
Motor proteins
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109896846
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109896846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109896846
03036 Chromosome and associated proteins [BR:
oki03036
]
109896846
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109896846
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109896846
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
109896846
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
109896846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
109896846
NCBI-ProteinID:
XP_031687980
Ensembl:
ENSOKIG00005003902
LinkDB
All DBs
Position
LG9:21995345..22023610
Genome browser
AA seq
1307 aa
AA seq
DB search
MAGMRRRHSVAVPAMGLGIGRGSLLFSSPLLSKMSADGGGKPAKVGSVVEVIGKGQRGTV
AYVGATLFATGKWVGVILDEPKGKNDGTVQGKRYFQCDENCGIFVRQSQIQLVEDGSSAT
SPDTPEAATAKFLPKQKDIPETPKSVKQMPIPKKFVTRRSTKLNTPDRLSSSSSLPSLLM
TPRVLATPASGLSSSLSREDVSEGSLSSKGALGAPVVPLPSGTPTTPSAPPPATPSKAEP
SVAKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKYKIQLEQLQEWKTKMQEQQA
DLQKQLKEAKKDAREALESKDRYMEEMSDTADAIEMATLDKEMAEERSESLQVEVESLKE
KVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLSSSEKQEHVK
LQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDL
EEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQETV
ADYQQTINKYRELTTSLQDSNRELTIAQNANAEQVQQPPAELFDFKIKFAETKAYAKAIE
MELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKF
DLNGNPVERTGMKMRGPPGEQLSFASGLVYSLTLLQATLHKYEQSLNCCSVEVYKRMGTL
YSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLADQTEDCTVQLAD
HIKFIQSALDCMGAEVVRLRAFLQPGQEGADLNILLKDLDTSCSDIKQFCKKIRRRMPGT
DVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNTLKLED
VAFKAVEQVYGSHGLNPHECLRQSCSSVISTMNKMATAMQEGEYDAERPQGKTPPVEARA
VALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKKLDTSTKDAD
ERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSNQSKVTIEGL
RAPPASGIASIVSGTAGAGVAPGAGGLSGPMQVVDSPLLRQQVETQRLGIKHLKNENNRL
KAEKMRAQLASLPPLHVPKLPLREASTSPPAEGPLQGALYRKTDQLLGTLLKMSAAVKVV
DITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVSEHVVSQQPGAKVSSDFATFPISSF
VKAKEEKQGGTVFIGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatgcgcaggcggcattctgtggccgtcccggcgatgggcctgggtattggc
cggggcagcttgctcttcagcagccccctcctgagcaagatgagtgcagacgggggcggc
aagcctgccaaggtgggctcggtggtggaggtgatcggtaagggtcagcgtggcacggtg
gcttacgtgggcgccacgctcttcgccactggtaagtgggtgggcgtgatcctggacgag
cccaagggcaagaacgatggcacggtccaggggaagagatactttcagtgtgatgagaac
tgtggtatattcgtgcgccagtcccagatccagctagtggaagatggatccagtgccacc
tctccagacaccccagaggcggccactgccaagttcctgcccaagcagaaagacattcct
gagactccgaaatcagtcaaacagatgcccattcccaagaagttcgtaacccgccgtagt
accaagttgaacactcctgatcgcctctcctcctccagctccctcccctccctcctcatg
accccccgagtcttagccaccccggcctctggtctgtccagctctctttccagggaggat
gtcagtgagggcagcctgtcttccaagggtgcactgggggctcccgttgtccccctgccc
agcggcacccccaccacgcccagtgctcctccccctgccacccctagcaaggctgagcct
tccgtagcgaagcaggaggaggagtctctgcgaggtcaggtgaaggatctagaggagaag
ctggagaccctgaagatgaagcgggcagaggacaaggtcaagctgaaggagctggagaag
tacaagatccagctggagcagctgcaggaatggaagaccaagatgcaggagcagcaggcc
gacctgcagaaacaactcaaggaggccaagaaggatgctcgggaggccctggagtctaag
gaccgctacatggaggagatgtcagacacggcggacgccatcgagatggccacactggac
aaggagatggccgaggagcggtcggagagcttgcaggtggaggtggagtcactgaaggag
aaggtggaggagctcaccatggacctggagatcatcaaacacgaggtcgaggagaaaggt
tctgatggagctgcctccagttaccatgtcaagcaactggaggagcagaacagcagactg
aaagaggctctggtcaggatgcgtgacctgtcttcctctgagaagcaggagcatgtgaag
ctccagaagcagatggagaagaagaatggagagctggagactctgaggacccagaaggag
aagctacaggaggagatgaagcaggctgaggccaccattgatgaactgaaggagcaggtt
gatgctgctctcggggcagaggagatggtggagactctgactgagaggaatctggacctg
gaggagaaagtccgagagctcagagagactgtcacagacctggaagcgatcaacgagatg
aatgacgagctgcaggagaacagcagggagacggagatggagctgagggagcagctggac
ctgaacggggccagggtgagagaggcccagaagagggtggaggccgctcaggagacggtg
gctgactatcagcagaccatcaacaagtatcgcgagctcaccaccagcctacaggatagc
aacagggagctgaccattgctcagaatgccaatgcagagcaggtccaacagcctcctgct
gagctgtttgacttcaagatcaagtttgctgagaccaaggcctacgccaaggccatcgag
atggagctgagaaagatggaggtgggccaggccaaccgacaagtgtctctcctcacctcc
ttcatgcccgactccttcctgcgtcatggaggagaccacgactgtattctggtgctcttg
ctcataccaagactcatttgcaaggctgagttgatcagcaagcaggcccaagagaagttt
gatctgaatggtaacccagtggagaggactgggatgaagatgagaggaccacctggagaa
caactcagctttgcctctggactggtgtattctctaaccctgctacaggccacgctgcac
aaatatgaacaatctctgaactgctgcagtgtggaggtgtataagcggatggggactctc
tactcagagatgagtgtccatgagcgttccctagacttctttatagacctgctgcacaaa
gaccagctggatgagactgtacatgtggagcctctcaccaaggccatcaagtactaccag
caactgtacagcatccacctggctgatcagactgaagattgcaccgtgcagctggctgat
cacatcaagttcatccagagtgcattggactgtatgggtgcagaggtggtgcgtctcagg
gccttcctgcagccggggcaagagggggctgacctgaacatcctgctgaaggacctagac
acatcctgcagcgacatcaaacagttctgcaagaagatcagacgcaggatgccagggacc
gacgtgccaggggtgcctgccgctctggcctttggcgcaccggtgtcagagactctaacg
gactgcaggcgtcagctgactcgggtggttgccgtgctacaggaggtagctgcggcgggg
gcgcagatggtcgctcctctaggagaacaggaggggctcaacaccctcaaactggaggac
gtggccttcaaggctgttgaacaggtgtatgggtcccatggcctgaatccccatgagtgt
ctgcgtcagtcctgcagctctgtcatctccaccatgaacaagatggctaccgccatgcag
gagggagagtatgacgccgagcgaccacagggaaagactcccccggtagaggctcgtgca
gtggccctcagggcagagatcactgacgcagagggtctgggagtcaaactggaggacaga
gacactgtcatcaaggagctcaagaagtccctgaagatcaaaggagaggagttgagtgag
gcccacgtccgtctcagcctgctagagaagaagctggatacgtccactaaagatgcagac
gaacgtgtggaaaagatccagaccaaactggatgagaccctcgccctgctcaagaagaaa
gagaaggagtttgaggaaaccatggatgccctgcaggcagacatcgaccagctggaggca
gagaaagcagagctgaagcagcgtctctccaaccagtcaaaggtgaccattgagggcctc
agggccccgcctgcctctggcatcgcatccatcgtctcaggaaccgccggagcgggtgtt
gccccaggagcagggggcctgtctgggccgatgcaggtggtggactcccctctcctccgt
cagcaggtggagacccagagactgggcatcaaacacctgaagaacgagaacaacagactg
aaggcagagaagatgagagcccagttagcctccctccctcccctccacgtccccaagctt
cctctgagagaggcctccacctctccccctgctgaggggcctctccagggggctctctac
aggaagacagaccagctgctggggaccctgctcaagatgagtgccgccgttaaggtggtc
gacatcaccgggaagactccagtgagtgcgagtgctcagctcctggaccagacagctcga
ctgcagtctctgagtgacgctctggacaagctgaagggtgaagtgtcagagcatgtggtt
tctcagcagcctggggcgaaggtctcctctgactttgccaccttccccatttcctccttc
gtcaaggccaaggaggagaagcaggggggtacggtgttcatagggcgcgtggccatccca
tgtgccaagggccaggagcaggtgcaccgtcttgtcctatcacagcagcacctgcagcag
gtgcaccgcctcctcatgacctaa
DBGET
integrated database retrieval system