KEGG   Oncorhynchus kisutch (coho salmon): 109898532
Entry
109898532         CDS       T09179                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    109898532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109898532
Enzymes [BR:oki01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109898532
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     109898532
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln Clp1
Other DBs
NCBI-GeneID: 109898532
NCBI-ProteinID: XP_031690095
Ensembl: ENSOKIG00005007390
LinkDB
Position
LG10:58574331..58656971
AA seq 1143 aa
MLLRPTVPGLCAMLQTIYETESCFSSDAVSSREQPLELLPQSQVSAMPSAAVEVKTTLPS
GMQSPVGGSEQGVGGGGGPVDLRTDPRLGPLGGGGGGVDPAMREQQLQHELLLLKQQQEL
QKQLLFAEFQKQHEVLTRQHEVQLQEHLKASLQQQQEILAAKRQQELEQKRKLEQQRHEE
LEKQRLEQQLLMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGTPGGLNHSFPQKCWGA
HHTSLDPNSPPQSNTPGTPPSYKLPPLLGSYEVRDDFPLRKTASEPNLKVRSRLKQKVAE
RRSSPLLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPN
IHAEQLRSLHQTLNADGTVSPLSLYTSPSLPNISLGLPANSHLTANQKLLQEAERQAIQT
MRQGGALTGKFVSTSSLPASCLPPGMQHDLDSTQAPNSHSSHSSLLQHVLLLEQARQQSA
LLSVPMYGQSPLVTGDRVSNSMRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQHQH
FLEKQKQYQLNKILSKGVELPRQPPTHPEETEEELTETQEMQEEGAGSERLGEGRPQEQR
LQKEESGETSPPSERLLTPLKGESTESDLEEEDDEDEAIELRECDEEGVPYGQHHLQQLN
VFQASLSISGMPHRPLGRAQSSPAAASIKGAPMGEVPIKHLFTTGLVYDTFMLKHQCMCG
NTHIHPEHAGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNR
QKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAGE
LKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVSKILIVDWDIHHGNGTQQ
AFYNDPNVLYISMHRYDDGNFFPGSGAPEEVGVGPGVGFNTNIAWTGGVEPPMGDVEYLT
AFRTVVMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFSHLTKQLMKLAGGRVV
LALEGGHDLTAICDASESCVAALLGDELDPLPQAVLQQKPCPKAAASLERVIEIQSKHWS
SLQRLAPTVGQSLMDAQRREKDEADTVTAMASLTVDTEQAAASTVSTETSRSTEEPMEEE
PVL
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgcttttaaggcccaccgtgccggggctgtgcgcaatgttgcagaccatctatgagacc
gagtcctgcttctcctcagacgcagtgtccagcagggagcaacctctggagctgctgccc
cagtcgcaggtgtctgccatgcccagtgctgctgtggaggtgaagacaactctcccctcg
gggatgcagagccctgtgggcggcagtgagcagggtgttggcggtggcggcggtcccgtg
gacctgaggacagatcccaggctgggacccctgggcggaggaggtggaggagtggaccca
gccatgagggagcagcaactgcagcatgaactgctcctcctcaagcagcagcaggagctt
cagaaacagcttctcttcgctgagttccagaagcagcatgaggttctgacacgccagcat
gaggttcagctgcaggagcacctgaaggcgtccctgcagcagcagcaggagatccttgcg
gcaaagcggcagcaggagctggagcagaagaggaagctggagcagcagaggcatgaagag
ctggagaaacagaggctggagcagcagctcctcatgctacgcaacaaggagaagggcaaa
gagagtgccattgccagtacggaggtgaagctgaagctccaagagttcctcctgagcaaa
aaagagcctggtacacctggcggactaaaccattccttccctcagaaatgctggggggcc
caccacacctctctggaccccaactccccccctcagagtaacactccgggaacgccgccc
tcctacaaactgcccccgctactggggtcctacgaggttagggatgatttccctctccgg
aagacagcctctgagcccaatctgaaggtgcgttcgcggttaaaacagaaggtagctgag
aggcggagcagtcctctgctgaggaggaaggacgggacagtgataagcaccttcaaaaag
agagccatcgagatctctgtgtcctcaatgtgcagcagtgcccctggctctgggcccagc
tcgcccaacagctccaacagcgccatcgcagagaacggctccagcggctctgtccccaac
attcacgccgagcagctgcggtccctccaccagacccttaacgccgatgggacagtcagt
ccactgagcctctacacatccccttcgctgcccaacatctccctgggcctaccagccaac
tcgcacctcaccgccaatcagaagctgttgcaggaggcggagaggcaggccatccagacc
atgcgtcagggtggggctctgacgggcaagtttgtcagcacctcgtccctgccggcatca
tgcctgccacctgggatgcaacacgacttagactccacccaggcccccaacagccacagc
agtcactcctccctactgcaacacgtcctcctgctggagcaggcccgccagcagagtgcc
ctcctctcagtccccatgtatggtcagtcgccgttggtgacgggggaccgggtgtccaac
agtatgcgcacggtgaacaagctaccacgccaccggcccctgagccgcacacagtctgcg
cccctcccccagagcccccaggccctgcagcagctcgtcatgcagcagcagcaccagcac
ttcctggagaagcagaagcagtaccagctcaacaagattctgtcaaaaggggtggagctt
cctcgccaaccgcccacccaccccgaggagactgaggaggagctcacagagacgcaggag
atgcaggaggagggggcagggtctgagcgtctgggggaggggcgtcctcaggagcagagg
ctccagaaggaagagtcgggggagacgtcgcccccttcagaacgcctgctgacccccctg
aagggcgagagcacagagagcgacctggaggaagaggatgatgaagacgaggccatcgag
ctgagggagtgtgatgaggagggcgtaccttacggccaacatcacctgcaacagctcaat
gtgttccaggcgtccctgtccatttcgggcatgccccacagacctctggggagggcccag
tcctcccctgccgctgccagcatcaagggggctcccatgggtgaggtccccatcaagcac
ctcttcactacagggttggtgtacgacacctttatgctgaagcaccagtgtatgtgtggg
aacacccacatccacccagagcacgccggccgcatccagagtgtgtggtcccggttgcag
gagactgggctcctgggccgctgtgagaggattcgggggaggaaggccacgttggatgag
atccagactgtgcattcagaataccacaccctgctgtatggcaccagtcccctcaacaga
cagaaactagacagcaagaagctcttaggtccaatcagtcagaagatgtatgctgtgttg
ccctgtggaggcattggggtggacagtgacactgtgtggaacgagatgcactcctcgggc
gctgtcagaatggctgttggctgcgtcatcgagctggctttcaaagtggccgctggggaa
ctgaagaacggttttgccgtggtgcgtccaccaggccatcacgctgaggaatccactgcc
atgggcttttgcttcttcaactcagtggccatcacagccaagctgctacagcagaaacta
ggagtgagcaagatcctcatcgtggactgggacattcaccatggtaacgggacgcagcag
gctttttacaacgaccccaatgtactttacatttccatgcatcgctacgacgatggaaac
ttcttccccggtagtggggctcctgaagaggtgggggttggacctggtgttggcttcaac
acaaacatcgcttggacagggggcgtagaaccgcccatgggtgacgtggagtacctgact
gccttcaggacggtggtgatgcccatagccaacgagttctcccctgacgtggtcctagtg
tccgctgggtttgatgccgtggagggccaccagtcccctctgggaggatacaacgtcact
gctaaatgtttcagccacctcaccaagcagctgatgaagctggcagggggacgtgtggtc
ctggcgctagaaggaggtcacgacctcacggccatctgtgatgcctccgagtcctgcgtg
gcggccctgctcggcgatgagttggaccccctgccacaggctgtcctgcaacagaagccc
tgtccaaaagctgctgcctctctggagagggtcatcgagatacagagtaaacactggagc
tctctccaaaggttggctcccacggtgggccagtccttaatggatgcccagcggagagag
aaggacgaggccgacacggtcaccgccatggcatcgcttaccgtggatacggagcaggct
gccgcttccaccgtctccacggagaccagccggtctacagaagagccaatggaagaggag
cctgtcttgtaa

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