Oncorhynchus kisutch (coho salmon): 109898622
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Entry
109898622 CDS
T09179
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109898622
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109898622
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
109898622
NCBI-ProteinID:
XP_031690215
Ensembl:
ENSOKIG00005004160
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All DBs
Position
LG10:60019143..60058424
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AA seq
473 aa
AA seq
DB search
MLMSTDVASIMLPVSRGMMDREKDIDTATGPHANTTGGPAAIVRGMKRGDPEQTVAALTE
LAGAECKRPRIDGTVGVGDIGQNNDPLTPGFLGYPPHSQGSQDSTGGQEGLVPPPFSVFP
PPPPPQNGLGTEFVGALFGASGQGPSDSGAGTNGSATTSNILPTPQTEVSPGQVDGVGQC
VAVELAGVSGADSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNERGSK
GFGFVTFETSADAEKARERLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALSTLPY
AGWKLSPMVQAMYGPELYAVPGFPYPSAAAAASTAAAFRGAHLRGRGRPVYGAVRAAVPQ
PALPAYPGIVFQDSVISSRLPQGGYPAAAYRFAQPTAVTGATAAAAAAAYSDSYGRVYTT
DPYHALGPAAAAYGVGAMVRAPQPQHYNNRLETELSSLYASLYRAGYSRFAPY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatccataatgttacccgtttctcggggaatgatggac
cgggaaaaggacattgatacagcaactggaccccatgcgaacacgaccgggggtccagca
gcaatcgtccggggaatgaaacgaggggatcctgagcaaacagttgcagctttgaccgaa
ttagcaggagcagagtgcaaacggccaaggatagacgggacggtgggtgttggtgacatt
ggacagaacaacgaccctttaaccccaggtttccttggatacccacctcacagccagggt
tctcaagattcaacggggggccaggaggggctggtgcccccgcccttctcagtgttccct
ccaccaccccctccgcagaatggcctggggacagagtttgtcggtgctttgtttggtgct
agtggacaggggccttcggattcaggggctggaacaaatggctcagccaccacttccaac
atcttacccaccccgcagacagaagtgtccccaggtcaggtagatggagtggggcagtgc
gtggcagtagaattagcaggagtatccggggctgactccgcagaggccaaaggaacccca
aaacgacttcacgtctccaacatccccttccgcttccgagaccctgacctcaggcagatg
tttgggcaatttgggaagattattgatgttgagataattttcaatgagaggggctcaaag
ggctttggctttgtcacgtttgagaccagcgccgacgcggagaaagcccgggaaaggctt
cacggcacgctagtggaaggtcgcaagatagaggttaacaatgccacggccagggtgatg
accaataagaagatggtcagcccctaccccaacggagaggcccttagcaccctgccatat
gcaggatggaagctaagcccaatggtgcaggccatgtacggaccagagctctatgcagtt
ccggggttcccctacccgtctgcggcagcggcagcctccacggcagctgcgttccgtggt
gcccaccttaggggccggggaaggccagtgtacggcgctgtgcgtgcggcggtgccgcag
cctgccctccctgcctaccctggaatagtgtttcaggactctgtcattagtagcagattg
cctcagggaggctatcctgccgctgcctatcgctttgctcagcctactgctgtaaccggg
gcaactgctgccgcggcagctgctgcttacagtgacagttatgggcgagtgtacactaca
gatccctaccacgctctaggtcctgctgcagctgcctatggagtcggtgccatggtaaga
gccccccagccgcaacactacaacaacaggctggaaactgagttatcttcactttatgct
agtttatatcgggctggatacagtaggtttgcaccgtactaa
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