Oncorhynchus kisutch (coho salmon): 116352794
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Entry
116352794 CDS
T09179
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
116352794
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116352794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116352794
NCBI-ProteinID:
XP_031643151
Ensembl:
ENSOKIG00005011032
LinkDB
All DBs
Position
LG13:complement(74276409..74290388)
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AA seq
393 aa
AA seq
DB search
MLSSPTMILQPYGLPVYPQGAQCYPSLVQGGPGQEACPGSGDPTLPQVYAQPPSYPPPGQ
APPTPAGRLPPLDYSSAHPNSEYQEHHQLRVYQGPQHEGADTLAAISTDDALVPVTSDSQ
ALSVSVSSGGGAGSGSDEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKVEVNNATARIVTKKPQTPLVNGEVS
TPGWKINPVMGAMYAPELYTGEFQFASFPYPVAAPTLAYRGSPLRGRGRAVYNTIRSAAA
AAPTAMPAYPGMSPFSVLYQDGLYGAEVYGGYPAAYRVAQSPSAATATYSDGYGRVYAAA
TDPYHHSVGPTATYGVGTMASLYRGGYNRFTPY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctctcttctcctacaatgattcttcagccttacggactgcccgtctatccccagggt
gcccaatgttaccccagcctagtacagggaggccctgggcaggaggcctgccccggcagt
ggtgaccccaccctcccacaggtctatgcccagcctccctcataccctccaccaggacaa
gctcctcccacacctgcaggcagacttcctcctctagactatagttccgcccaccccaac
tcagagtaccaggagcatcaccagctcagagtctatcagggcccgcaacacgaaggggct
gacactctggcagccattagcacggacgatgccctggttccggtgacctctgactcccaa
gctctgagcgtgtcagtgtcatcagggggcggagcaggaagtggtagcgatgaggagggg
tcaggcaaggcccagcccaagcgtctccacgtttccaacatccccttccgcttcagagac
ccggacctcagacagatgtttgggcaatttggcaagatcctggatgtggagattatcttt
aatgagagagggtcaaagggttttgggttcgtgacctttgagagcgcaatggaggcagac
cgagcaagggaaaaactgaacggaactatcgttgaggggaggaaggttgaggtgaacaat
gctacagccagaatagtcaccaagaagccccaaacacctcttgtgaatggtgaggtttca
acccctggatggaagatcaaccctgtcatgggagcgatgtatgcacctgaactctacacc
ggtgagtttcaatttgccagtttcccctaccccgtagctgctcccaccctggcctatcgg
ggctcaccactgcgtgggcggggcagggcagtctacaacacaattcgctcagctgctgca
gccgcacccactgccatgcccgcctaccctggaatgtctcctttcagtgtgctgtaccaa
gatggattatatggagctgaagtctatggcgggtatcctgcagcgtacagagttgcccaa
tcaccatccgctgccacagcaacatacagtgatggatatggccgagtttatgctgctgca
acggatccctaccaccattcagtgggacccacggcaacatacggtgtcggaacaatggcc
agtctgtacagagggggatacaaccgcttcaccccttactga
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