Oncorhynchus kisutch (coho salmon): 116366312
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Entry
116366312 CDS
T09179
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
116366312
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116366312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
Fib_alpha
Jiraiya
Y1_Tnp
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
116366312
NCBI-ProteinID:
XP_031674352
Ensembl:
ENSOKIG00005041573
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHNYCRICIEGCWDQDDLKGVYRCPQCRHT
FTTRPTLMKNNMLAELVEKLRKTGLQAAPPPALCYAGPGDVVCDFCTGTRKQKALMSCLA
CLASYCETHLQSHYEFPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYQCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQERKKELKKLQQAVKSFKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQRYQSLSSISISSDLPSIVVCPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSEGNRKVTRTRQGQPYPDHP
DRFTNYRQVLCREGLSGRCYWEVEWTGGVVTAVSYKDISRTGDDSAFGYNNKSWSLEYYI
GGYCFSHNNVETKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGF
RLNGYNDTAELVKL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcaccattccctgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgatctgaaaggggtctatagatgtcctcagtgcagacatacc
ttcactacaaggcctacgctgatgaaaaataacatgttggctgagctggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggggat
gtggtgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcg
tgtctggcctcttactgtgagactcacctccaatctcactatgaatttcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtactgatcagcagtgtatctgttatcagtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagaaagaaggagctg
aagaagctccaacaggctgtgaagtctttcaagcgctctgcacagtcagcagtggaggat
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagaggtatcagtctctctccagtatcagtatatct
tcagacttacccagcatcgttgtctgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacacacacctctctctg
tctgaagggaacagaaaggtgacacgtacacgccaaggccaaccatatcctgaccatcca
gacagattcaccaactacaggcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggactggtggtgttgttacagcagtctcatataaagacatcagcaga
acaggggatgatagtgcatttggatacaataacaagtcctggagtttagagtactatatt
ggtggttattgtttcagtcacaataatgttgagactaaagtatcaggccctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctgggttt
aggctcaatggttataatgatactgctgagctggttaaactgtaa
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integrated database retrieval system
