Oryzias latipes (Japanese medaka): 101156447
Help
Entry
101156447 CDS
T02443
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X1
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101156447 (rbbp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101156447 (rbbp8)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
101156447 (rbbp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CtIP_N
SAE2
HALZ
DivIC
ADIP
YabA
Motif
Other DBs
NCBI-GeneID:
101156447
NCBI-ProteinID:
XP_011487094
LinkDB
All DBs
Position
20:11814020..11820472
Genome browser
AA seq
629 aa
AA seq
DB search
MSGSGDSSGTIKAADPFEDLWRQLGECHHHVTGELEAKVSRLKKDRCLDAQRLEVFYNRN
QHLKEENKTLHDTIHLLEERLRAGECDRCVVLEEKLKSSLDQNLRLLDELRIERNNLQDE
NRKLRAEIQKLKASCSSSEQDDGFIPDSPVLPSSLPPANKLRKRKQVAQQKHVRYEEKPL
PHAHKSLLCEPPGAAENAGKAEVLVPNTCELDMPQIAGDGEAVAETCALLPVGKHSVKIK
FPSNQQSSPKPFLKYNVCLKPHCFSSSARRHSPDSTTKKSPSLLPHVRLFADDASVCRLM
KEEKREELVDDNRDESREGAASKLLQPEQISSKKVQSSDGGGPGPKPPSSPAFRVPLCVT
KGDGGAKRTPLQNSNASLCGARERRTLAVEPAWSIDPALALSSCDDELEGDEDLEEKQHG
GELMDTDCTWVSHSMLQRPGQFGPDSRDVKPDLGARAVDSLDMMFDTTAYGEFQSCSSLP
LNQSQRDDDDEDDDDVEEIHEEDIGESPDSHTRPSKAQQPAFAHVAVVRKKDERRKLKGA
TCKECEIYYAHLPEEEKQKKLSACSRHRYLYIPPCTPENFWEVGFPSTQTCIDRGYIKEE
SSPPGRMRRRQPFNALFTPKKKEQSLKSP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatcaggtgacagcagtgggacgatcaaagcagctgatccctttgaggatctg
tggcggcagctgggagagtgtcatcatcacgtgactggagagctggaagcaaaggtgagc
cggctgaaaaaggaccgctgcctagatgctcagagacttgaggtgttttacaaccgtaac
cagcatctgaaggaggagaacaaaaccctgcacgacaccatccacctcctagaggaaagg
ctcagagcaggagagtgcgaccgttgtgttgtcttggaggaaaagctgaagagcagcctg
gatcagaatctcagacttcttgatgaactgagaattgaaagaaacaacctgcaggatgaa
aacaggaaactccgtgctgagatacaaaagctgaaagcatcgtgttcctcctcagagcaa
gacgacggcttcatccccgactcgcccgtcctgcccagctcgctgccgcccgccaacaag
ctgaggaagcgcaaacaggtcgcccagcagaaacacgtccgttacgaggagaagcccctc
ccccacgcccacaagtccctcctgtgtgaacccccaggtgccgcagagaatgctgggaaa
gcggaagtgttggtgccgaacacgtgtgagctggacatgcctcagatcgcaggtgacgga
gaggcggtggcagaaacgtgcgcccttctgcctgttggtaaacattccgtgaaaataaag
tttccttcaaatcagcagagttctccaaaacccttcttgaaatacaatgtgtgtttaaag
cctcactgcttctcttcatccgcccggaggcacagtcccgactccaccactaagaagtcc
ccgtctcttctgccccacgtccgactttttgcagatgacgcctccgtttgtaggctgatg
aaggaggaaaaaagggaagagctggtggacgacaaccgagatgaaagcagggagggggcg
gccagcaaactcctccaacctgagcagatctccagtaagaaggttcagtcctctgacggt
ggcggccccggcccaaagcccccctcctctcctgcttttcgggttcccctctgcgtgact
aaaggagatggaggcgccaagagaactcctctgcagaactccaatgcttcactctgcgga
gccagagagcgcaggacgctcgccgtggagccggcatggagcatcgaccccgccctcgct
ctgtcctcctgtgatgacgagctggaaggagacgaggatctggaagaaaagcagcatggc
ggcgagctgatggacacggactgcacgtgggtcagccacagcatgcttcagcgtccggga
cagttcggtccggacagcagagacgtcaagccagatttaggcgccagggcggtggacagt
ttggatatgatgtttgacaccacggcttatggcgagttccagtcctgcagcagcctgcct
ttaaatcagagccagcgcgatgatgatgatgaggatgatgatgatgtagaggaaatacat
gaagaggacattggtgaatcacctgacagccacacgcgtccaagtaaagcccaacagccg
gcctttgcacacgtggcggtggttcgtaagaaagacgagaggcggaagctgaaaggcgcc
acctgcaaagaatgtgagatttattacgctcatctaccagaggaggaaaagcagaaaaag
ctctccgcctgctccagacatcgctatctctacatccctccatgcacgcctgaaaacttc
tgggaagtgggtttcccgtccacacaaacctgcattgacagaggctacatcaaagaagag
agcagtcctccagggcgaatgaggagaagacaacctttcaacgccttattcaccccaaag
aaaaaggagcaaagcctaaaatccccctga
DBGET
integrated database retrieval system
