Oryzias latipes (Japanese medaka): 101156964
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Entry
101156964 CDS
T02443
Symbol
cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04217
Necroptosis
ola04622
RIG-I-like receptor signaling pathway
ola04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101156964 (cyld)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101156964 (cyld)
04625 C-type lectin receptor signaling pathway
101156964 (cyld)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101156964 (cyld)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101156964 (cyld)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101156964 (cyld)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C67
101156964 (cyld)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101156964 (cyld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
101156964
NCBI-ProteinID:
XP_004067541
LinkDB
All DBs
Position
3:complement(30212792..30229924)
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AA seq
957 aa
AA seq
DB search
MSSALWNQDRSGGGFREDWRFYMVIKECTVEKPAQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVLELEEKLAELLFPITNCEERYALLCDEQRLQRVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGTYQGR
QLFRCEEECGVFVALDKLELWEDDDDDTVGELEVDHVRLVEDDQDFPPLEINSRVVVQTR
EGPERGTIIFCGLLPSNESLGYYVGVDMDNPIGDWDGMFHGKQLCNFASLEHTRLVPICD
VMPEYSMQDQRLPRHSFAPRGTNSDKSSCGPNKPNKKGLSHQTGSRSKSEFYYTLNGSSL
DPPCQSKSKSTWYIDEVGEDPAKSLTETPPDFNQSSPPPRAPLSSSLSTDNKFHSLPFSL
NRKPGPTDSMSPGPLSLSVQSVMGEQPEPPAAPAAPPSPRPSTPPRGQPGLEVGSLVEVK
ENPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCC
RPDSRFPSLHHSPNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYN
SCYLDSTLFCLFSFSSVLDTVLLRPQSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKV
MKLRRILEKVEAASGFTSEEKDPEEFLIILFHHILRVDPLLKLRSAGQKVQDCYFYQIFM
DKKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITD
LLEDTPRECRICGGLAFYECRDCYDDGDITAGKIKQFCEKCNTQVHLHPKRKAHRHGKLS
VPKELQEGTGRQGGFPRQRMELFAVLCIETSHYVAFVKYGTADSAWLFFDSMADRDGGQN
GFNIPQVSPCPEVETYLKMSPEELHTLDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggaaccaggataggtctggtgggggcttcagggaggactggcgc
ttctacatggtcataaaagaatgtactgtggagaagcctgcacagaagaccctaaggatc
ccccgtggtagcctgggccaggcctgtcaggagcgtaatagcctgggacgaactctccct
ccatgcaagggcaagaagagcctccgcatcctggaccagaccaacgtggtgctgagcctg
gatgagcgggatgtgttggagttggaggagaagctggctgagctgctgttccccattacc
aactgtgaggagcgatatgccctgctgtgcgacgagcaacgtctgcagcgggttcgtgac
atcgattgtggttccaaggtgcgtgtccagctgcgatcaggggatgagcctctgccaggt
gtggttcgcttcaagggctcactgctgcctgacagagccctgtcgggaatctggtttgga
gtggagctgctggaggagggtcgaggtcagggcttcacggagggcacctaccagggtcgc
cagctttttcgctgtgaggaagagtgcggcgtgtttgtggctctggacaagcttgaactc
tgggaggacgacgatgacgacacagtgggggagctggaggtggatcacgtcaggctggtg
gaagacgatcaggactttcctccactggagatcaactccagggttgtggtgcagaccaga
gagggaccagagaggggcaccatcattttttgtggcctgctacccagtaatgagagctta
ggatactatgtaggagttgacatggacaatcctatcggggactgggatggtatgtttcac
gggaagcagttgtgtaattttgccagtttggaacacactcgacttgtccccatctgtgac
gtaatgccagaatattccatgcaggaccaaaggctgccgaggcacagttttgcccccaga
ggcaccaacagtgacaagtcatcctgtggccccaacaaaccaaataaaaaagggttaagt
catcaaactggaagtagaagcaagtctgagttttactatactttaaatggcagctctctt
gacccgccttgccagtccaaatccaaaagcacatggtacattgatgaagttggagaggac
cctgccaagtcacttactgagacaccccctgacttcaatcagtcctccccgccccctaga
gccccactctcctcctcactatccaccgataacaagttccactcgctgcccttcagcctg
aaccgcaagccggggcccactgacagcatgagtcccggtccgctctccctctctgtccag
tcagtgatgggggagcagcccgagcccccggcagctccggctgccccgccttctccacgg
ccttcaacgcctcctcgaggtcagccgggtctggaggtgggctctctggtggaggtgaag
gagaacccccctctgtgtggtgtgatccgctgggtgggtctgcctcctggcctgctggag
cctttggcggggctggaactggaagaagagtgccccggctgcaccgacggcaccttcaaa
ggtacccggtatttcacctgcccacctaagaaagctttgttcgtcaagctcaagtgctgt
cggcccgactcccgcttcccgtccctgcaccactcccccaaccccatagagcgatgcaac
tcaatcgcatttggaggttacctgagcgaggtcgttcacgaaaacacgcctccgcgcaca
gaaaacgacggcctggatgtaatggtgggaaaaaagaaaggcattcagggtcattacaac
tcctgctaccttgattcaaccctcttctgtctcttctccttcagttctgttttggacacg
gttctgctgaggccacaatcaaagactgatgtggagtattacagagagacccaggagctg
ctacgcactgagatagtgaaccccctacgcatacatggttatgtttgtgccacaaaagta
atgaagctgaggaggattcttgaaaaagtggaggcagcttctggatttacctctgaagaa
aaagatcccgaggagttcctcatcattctttttcaccacatattgagagtggatccactg
cttaagctcagatcagcaggtcagaaggtccaggactgttacttttaccagatcttcatg
gacaagaaagacaaggttggagttccaaccatccagcagcttttagagtggtccttcatc
aacagtgacctaaagtttgcagaggctccctcctgccttatcatccagatgccccgcttt
ggcaaggacttcaaaatgttcaacaagatttttccttcgttagagttggacatcacggat
cttcttgaagacactccgagggaatgtcgtatctgcgggggcctggcgttctacgagtgc
agagactgttatgacgacggggacatcaccgccggcaagattaaacagttctgtgaaaag
tgtaatacacaggttcacctccacccaaagaggaaagcccatcgacatggcaaactgtcc
gtccccaaggagctgcaagaaggtacggggcgtcagggcggctttccccgccagaggatg
gagctgttcgctgtgctatgcatcgagaccagtcactacgtggccttcgtcaagtacggc
accgcagattccgcctggctcttcttcgacagtatggctgaccgcgacgggggccagaac
ggtttcaacatcccccaggtgtctccgtgccccgaggtggagacctacctgaaaatgtct
ccggaagagctgcacactctcgaccccaagagtatccagggccaggcgcgccgcctgctc
tgcgacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaagtaa
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