Oryzias latipes (Japanese medaka): 101157474
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Entry
101157474 CDS
T02443
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101157474 (smc4)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
101157474 (smc4)
Condensin II
101157474 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
WEMBL
AAA_29
Laminin_I
Crescentin
Oxidored_nitro
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101157474
NCBI-ProteinID:
XP_023817099
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All DBs
Position
13:13491380..13507392
Genome browser
AA seq
1296 aa
AA seq
DB search
MPSKTAKSSTASTKPRGKGSQDVSEGDLDVPPQETNSNGQEEAPPTTDSAEGEAAEAVDN
RSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEGDDY
EVIPNSKFYVSRTANKDGSSAYHINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQI
AMMKPKGQTEHDEGMLEYLEDIIGSCRLKKPIQVLARRIELLNEQRGEKLNRVKLVEKEK
NALEGEKNKAVEFLKLENDIFKHKSQLYQYYVHDLQQRVVDKEQEKQKILEETKELTEKN
AKISQEMEKMNEELKNVEKKQNKINKYIEAQKEQFTQLDLQDVEVREKIKHSKNKKKTLQ
KQLEKEQKKLEEVQSIPSSSEKAISEATARKEDLEKQKVKEEDKLKEVMESLKEETSGLQ
QDKEKKEKELMELSKAVNETRSRMDLAQSELDIYLSRHKTALAQLNTAKQTLQTTSDTLK
ERRAAIKDLEVQIPEKVQELKKDQEELEKLTKMDNETREVVKELREKVDEAKTSLSSNRS
RGKVLDALMQLKKTGRIPGIYGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDTAQKCV
TFLKEQNIGVATFIGLDKMKTWEKNMAPIRTPEDSPRLFDMVRVNDDSVRPAFYFALRDT
LVAQDMEQATRMAFQKEKRWRVVTLKGQIIEMAGTMTGGGRIMKGRMGSSISTDFSQAEL
DRMESKLNEKVSKLHGCQEKKLQVEESVQRLQPQLREMKNTFEKYTNSITSLADQETHLV
LQIKELEANVLAAAPDKNKQKQMEKSLENFKKDYESASSKAGKVENEVKRLHNLIVDINS
HKLKAQQDKLDKINKELDECSSIITKAKVAIKTADRNLKKCEESVAHLQSELEENEKLMT
DLTEQLKKVEDEAGEIMKACQEAEAALPEVQEQYQKVSKEIKILQQQEHALQEESLNVRL
SIEQIDATITKHNGKIKHWQDEASKLSLHVIEGQPNEKLPVLAAAELKAISDPNAIVNKM
STLEIQCSHLKPNLGAISEYKKKEELYLQRVAQLDEITAERDTFKCSYEDLRKRRLNEFM
TGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEK
TLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMF
EIADRLIGIYKTHNTTKSVGINPKTIAFREHDAVSA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaaaaccgcaaagagctcaaccgcctctaccaagccaagaggaaaagggtcg
caggatgtgtctgagggtgatctggatgtaccccctcaagaaactaactccaatggccaa
gaggaggcaccaccgacaactgattcggcagaaggggaggctgccgaggcggtcgataat
cgaagtttggaggagattctcggtagcatccctccacccccgcccccagcaatgaccaat
gagccgggcgctccccgcctgatgataacacatttagtgaaccgcaactttaagtcgtac
gcaggcgagcagattctggggccttttcacaagcgcttttcctgcatcattggtccaaat
ggaagcggcaagtctaatgtgatagactccatgctctttgtgtttggatacagagctcaa
aagataagatcaaaaaagctttcagtgttgattcacagctctgataaacacaaagatgtg
caaagctgtactgtggaggtgcattttcaaaagatcattgataaggaaggagatgactac
gaagtcatccccaacagcaaattctacgtttccaggactgccaacaaagacggttcctca
gcctaccatatcaatggcaagaaagccacatttaaagaagtgggggcattactacgaagt
cacggtattgacctcgaccacaacaggtttctgattttacagggtgaggtggagcagatt
gcaatgatgaagcccaaaggtcagacggagcacgatgaaggcatgctggagtatctagag
gacatcatcggttcttgtcgtctcaagaagcccatccaggttctggctcgccgcattgag
ctcctcaatgaacagagaggagaaaagctaaacagagtaaagttagtggaaaaggagaaa
aatgctttggagggagagaagaacaaagctgtggagttcctgaaactggagaatgacatc
ttcaaacacaagagtcagctctaccagtattatgtccacgacctgcagcagcgtgtggtg
gataaagagcaggagaagcagaagatcctggaggaaactaaagagctcacagaaaaaaat
gcaaagatatcgcaagaaatggagaaaatgaacgaagagctaaaaaatgtagagaaaaaa
caaaataaaatcaacaagtacatcgaggcgcagaaagagcagttcacccagctggacctg
caggacgttgaagtgcgtgagaagatcaaacactccaagaacaagaagaagacactgcag
aagcagctggaaaaagaacagaagaagttggaagaagtacaaagtataccaagcagcagt
gagaaggccatctctgaggcaacagcccgcaaggaagacctggagaaacagaaagtaaaa
gaagaagacaaactcaaggaagtgatggaaagcttgaaggaggaaacgagtggattacag
caggacaaagagaaaaaagagaaagagctgatggaactaagtaaggctgtgaatgagacc
cgttctcgcatggacctcgctcagtcggagctcgatatctacctcagccgtcacaagacc
gctctggcacagctcaacacggccaagcagacgcttcagaccacctcggacacgctcaag
gagcgccgcgctgccatcaaagacctggaagttcaaattccagagaaggtgcaggagctc
aaaaaggatcaagaagagttggagaagctgacgaagatggataacgaaaccagagaagtt
gtcaaagagttacgggagaaggtggatgaagccaagacttccctttcctccaaccgtagt
cgaggaaaagtcctggatgccctgatgcagctgaagaagaccggcagaattcctggcatc
tatgggagattgggagaccttggagccatagatgagaagtatgatgtggcaatttcctct
tgttgtggtgctctggacaatattgtggtggacaccattgacacggctcagaaatgtgtc
accttcctcaaagagcagaacattggagtcgccactttcatcggtctggacaagatgaag
acgtgggagaaaaacatggcccccatccgcacccctgaagacagcccccggctgttcgac
atggtccgagtgaacgacgacagcgtgcggccggcgttctactttgctttaagggacacc
ctagtggctcaagacatggagcaggccacacgcatggctttccaaaaagagaagcggtgg
agagtggtcaccctgaaaggacagatcatcgagatggctggaacaatgacaggaggagga
aggataatgaaaggcagaatgggctcctctattagcaccgacttctcccaagcagagctt
gaccggatggagagcaaactaaatgaaaaagtctccaaactgcacggctgccaagagaaa
aagctgcaggtggaggagagcgtccagcgtctgcaaccacagctcagagagatgaagaac
acctttgaaaaatacaccaacagcatcactagtctcgccgaccaggagacccacttggtg
cttcagattaaagagctcgaagccaacgtgctggcagctgctccagacaagaacaaacaa
aaacagatggaaaagagcctggaaaacttcaagaaagactacgagtcagcatccagtaaa
gcagggaaggtggaaaatgaggtaaaaaggctccacaacctgattgtggacattaacagc
cacaagctaaaagctcagcaggacaaactggacaagatcaacaaggagctggatgaatgc
tcctccatcataacgaaagccaaagtggctataaagaccgctgatcgcaacctgaaaaag
tgtgaggagagtgtggctcatttgcagagcgagctggaggagaatgagaagttgatgacg
gacctcactgagcaactgaagaaagtggaagatgaggctggggagatcatgaaagcgtgc
caggaggctgaggctgcactacctgaggtacaggagcagtatcagaaggtgtcaaaggaa
ataaagatcctgcagcagcaggagcacgcactgcaggaggagtccctcaatgtgaggctc
tctatcgagcagattgacgccaccataaccaaacacaacggcaagatcaagcactggcag
gacgaggcttccaagttgtccctacatgtcattgaaggccagccaaatgagaaactcccc
gtcctcgctgctgctgagcttaaagccatctcagatcccaacgccatcgtgaacaagatg
agcacgttggagatccagtgcagtcatctgaagcccaacctgggagccatctcagagtac
aagaagaaggaggagctgtacctgcagcgtgtggcccagctggacgagatcacagcggag
agggacaccttcaaatgcagctacgaggacctgcggaaacggcgactcaacgagttcatg
accggcttcaacatgatcaccaacaagttaaaggagaactaccaaatgctgacacttggt
ggcgatgcagagctggagctcgtggacagcttagatcccttctctgaaggcatcatgttc
agtgttcgtcctccaaagaaaagctggaaaaagatcttcaacctttcaggaggagaaaag
accctcagctctttggctctcgtgttcgctcttcatcactataagccgacgcctctctac
tttatggacgagatcgatgctgctctggacttcaagaacgtctccatcgtggcttgttac
atttatgaacaaaccaagaacgctcagttcatcattatctccttgaggaacaacatgttt
gagattgccgatcgcctcattggcatctacaaaacccacaacaccaccaagagcgtgggc
atcaaccccaaaaccatcgcttttagagagcacgacgccgtcagtgcttga
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