Oryzias latipes (Japanese medaka): 101157754
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Entry
101157754 CDS
T02443
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101157754
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101157754
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
101157754
NCBI-ProteinID:
XP_023811661
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All DBs
Position
1:11010650..11062814
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AA seq
482 aa
AA seq
DB search
MLMSNDVASIMLPVSRALMDRDRELDTMPGVHPNAGGAPAAVRGMKRGDPEPDAQTAAAL
VDSSGAECKRPRIDGSGGLGEVGQNNDPLTLGYHGYQAHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLTLDYGGSLYATGAVQGPVEAGGAGNGVVNPANSLSAQSDGSSQIDGQ
SGVGSGGGGGVSGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG
SKGFGFVTFESSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKITTPYSNGEGLAAL
PYAGWKLSPMVGAMYSPELYTAAVTDSPEQKIQYISWQLQNLSQSHLSVPGFPYPAAAAA
AASTAATFRGAHLRGRARPVYSAVRAAVPQPAIPTYPGVMAYQEGFYGAADLYGGYATYR
YAQPAAVATPAAAAAAAAAAYSDSYGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFA
PY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgtcgaacgacgttgcttcaattatgctgcccgtgtcccgggcgctcatggac
cgggacagagagctggacaccatgccaggggtgcatcccaacgcgggcggcgctcctgca
gccgtccggggcatgaagcgcggggacccggaaccagacgcgcagacggcggccgcgctg
gtggactccagcggggcagagtgcaagcgcccccgcatcgacggctcgggagggctcggc
gaggtcggccagaacaacgacccattgactcttggttaccacggataccaggctcacagt
cagggctctcaggatagtgctggcggtcaggagggactggtacctccacctttctcagcg
tttccacctccccctccaccaccccctcagaatggcctgaccttggactacggcggcagt
ctctacgcgacgggggccgttcagggccctgtggaggccggcggagcgggaaacggcgtg
gtcaaccctgccaacagtctcagcgctcaatcagatgggtcctctcagattgacggccag
tctggagtcggctcgggaggagggggcggggtctccggggacgattccgatgccaaaggg
acccccaaacgcctacatgtctccaacatccccttccgcttccgtgaccctgacctgcgg
cagatgtttgggcaatttggcaaaatccttgacgtggagatcatttttaacgagagaggc
tccaagggctttggttttgtgacattcgaatcgagcgcagatgcggagagagccagagag
aagcttcacggcaccctggtggaagggcgtaaaattgaggtcaataacgctacagccaga
gtgatgacaaacaagaagataaccacaccgtactctaacggagagggccttgcagcacta
ccatatgctggttggaagttaagtcctatggttggagccatgtacagtccggagctttat
acagctgctgtgaccgatagtccggagcaaaaaatacagtatatttcttggcagcttcaa
aaccttagccaaagccatctgtcagtaccggggtttccatatccagcagcggcagcagct
gctgcctccactgctgcgacgtttcgaggcgcccacctgaggggccgtgcccgacccgtc
tacagtgccgtcagggcggccgtcccccagcccgccatccctacatatccaggcgtgatg
gcgtatcaggagggtttttacggtgccgctgacctctatggcggctatgcaacgtatcgt
tacgcccagccagctgctgtagcaactcctgcagccgctgccgccgccgcagctgcagca
tacagtgacagctatggacgagtttacacagcagacccctaccatgctgctctcgcgcca
gctgcctatggagttggagccatggccacgctctacagggggggctacagtagatttgcc
ccttactaa
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