Oryzias latipes (Japanese medaka): 101158931
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Entry
101158931 CDS
T02443
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101158931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101158931
03036 Chromosome and associated proteins [BR:
ola03036
]
101158931
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101158931
Coactivators
SAGA/TFTC/STAGA complex
101158931
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101158931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
101158931
NCBI-ProteinID:
XP_011492039
LinkDB
All DBs
Position
3:30571442..30661838
Genome browser
AA seq
1070 aa
AA seq
DB search
MAGASDPLEDMLYSEVDEKAVSDLVGSLESELTGQSTPVGKTDENGGAGSVPPANHHLGK
TLQPPVSITTLEQQQQGRRLKPEMRQEINSKDVSQDKTDTSPSLGCAPSFGEPSATSPAC
VSASSNGSQSHGASITTLTASSVSTPQDSISTASNRSTKAPAGTGETEAAEPPRRRIAAP
RRTASARIKSLNGAAVTTRRSSSNNTAAEESVSSADSSATTPNSTRPAPSSINASTFTVS
NASLPVGQSAIALDRGTPTIALQRLPSHIVASIAQNGNGTSVSALVQQSTRPGGAVNPAT
SQEDPGKTDPGASTADKPCVDMPGHSGTNTVASAPSAVTPATSTTAAATTTTTTQPLSTT
TTTTTTTTPAAACAAAMTATPACGTVQTTSVTATISMVRPTASSPSPAVATSAQTQPRPG
LATPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQAQAQA
QAQNSISPRPATPTTATTFRVSTPQPSPVTPQTARQCPLTSASMAPSPSPTPSSPALQTS
SLSSSSASSCPAIRPKGPVAPTMAVTAPQQAPVVMAPQAPSQPASQPVQPAQAGIAAAPG
GPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTSRL
QTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPPQQGVKPAPGSTPPAIVAGPAVR
ISHPNSVSTTPGATALPAGTLGHAAVMGVKSVGAVSGQVRMPVVLTQSIRPQGAMGKGAI
IQTGRSPMGLPAQICGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSE
LVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTDVPVEAVTFISHATQSRLRTMVEKIS
IIAQHRLDSCKDDEYYEQSTDVRSQLRFFEQLERIEKQRKDEQEREILLKAAKSRSRQED
PEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPRAQPSGTEVSGGSAG
SPASSSTLSSSSRQYTRQRITRVNLRDLVFYLEQERESTRSLLLYRALLK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccttggaagatatgctttattcagaggtggatgaaaaagcc
gttagcgacctggtgggttcattggagtcagagcttactggacaaagcaccccggtgggc
aaaacagacgaaaacggaggcgctggctctgtgccccctgctaatcaccacttaggaaaa
acgctacaacctccagtgagcatcacaacactagaacaacaacaacaaggacgccgttta
aaacccgaaatgcgccaggagatcaactctaaagacgttagccaggataaaactgacaca
tctccttcgctgggctgtgctccgtccttcggcgagccctccgccacctcgcccgcctgt
gtgagcgccagcagcaacggttcgcaatcacatggagcatccatcacaacactgaccgcg
tccagtgtgtcaactcctcaagacagcatcagcaccgcatccaaccgaagcactaaggcg
cccgcgggcaccggtgagacggaggcagcagagccgccgaggaggcgcatcgcggcgccg
aggagaaccgcctcggcgcggatcaagagtttgaacggtgcagccgtgacgacgaggagg
agcagcagcaacaacacggcggccgaggagagcgtcagctccgcggacagcagcgcgacc
acccccaactccacccgaccggcaccgtcctccattaacgcctcgactttcactgtgtcg
aacgccagcctgcccgtgggtcagtctgccatcgctctggaccgggggacccccaccatc
gctctgcagagactccccagccacatagtggccagcattgcccagaacggcaacggcacc
agtgtttcggccctggtgcagcaaagtactcgaccaggaggagctgtcaatcctgcaact
tcccaggaagatcctggtaaaacggaccccggagcttccacagcagacaagccctgcgtt
gacatgccaggccactctggaacaaacactgtagcctctgctccgtctgctgtcacacca
gcaacaagcacaacagcagctgcaactactactactaccacccagcctctgagcactact
actactactactactactactactccagctgcagcctgtgcagcagcaatgacagctacc
cctgcatgtgggacagtccagaccacatcagtgacggccacgatcagtatggtcaggcct
acagcctcctctcccagtcccgccgtggccacatctgcacagactcaaccccgtcctgga
cttgcaacgcctcaaaggattgtggctccacagctgattgtcagacccccccagcagcag
acaaccattcagctgccccctggatttaccatcccaccagggatggtgctggtccgtaca
gagttgggacagttggtgatggttccccagcaggctttggctcaagctcaagctcaagct
caggcccaaaacagcatctctccccgacctgccacccctactacagcgacaacctttaga
gtttccactccacagccgtctcctgtgacccctcagactgccaggcagtgccctctgacc
tcggccagcatggcaccctctccctctcccactccttccagccctgccctgcagacctcc
tccttgtcttcttcctctgcttcctcctgccctgcaatacgccctaagggccccgtggca
cccaccatggcagtgacggctccacagcaggcccctgtggtcatggccccccaggcccca
tctcagcctgcctctcagccagtgcagcctgcacaggcgggcatcgctgctgctcctgga
ggtcctgtcgtgtcccaggaaatgcaagagaatgtgaagaaatgtaagaacttcttggct
actctgatcaaacttgcatcccacaactctccctccccggagacttccaagaacgtgaag
gctctggtccaagacctgttggatgccaaaattgaacctgaagagttcaccagccgcctt
cagactgagctgaagtcctctccacagccttacctggtgccttttctcaagaagagcctc
ccggccctgaggctgtctctgctgaatagtcagcagtccctgacccagcccccgcagcag
ggagtcaaaccagcacccggcagcaccccgcctgccatcgtggccgggccagctgtgcgc
ataagccaccccaacagtgtcagcaccactccaggcgccaccgcactgcctgctgggacg
ctcggacatgcagccgtgatgggtgtgaaaagcgttggtgccgtcagtgggcaggtccgc
atgcccgtggtgctcacacagtccatcagaccacaaggcgcaatgggaaaaggagccatc
atccaaacaggcagaagtcccatgggcctgcctgctcagatctgtggaaatcagaaaaac
aagctcaacgacccagggggaggctccttcagagatgatgatgacatcaacgacgtggct
tccatggccggggtaaatctgaacgaagagagtgcgcgaatactggcgaccaactcggag
ctggtgggaactcagatccgctcctgtaaagacgaggctttcctccatccaggcctgctg
caccgacgaatcctggaaactgctaagaagtttggagtgacagacgttcccgtggaggcg
gtgacgttcatctcgcacgccacgcagtcacgactacggactatggtggaaaaaatttcc
atcattgcgcagcacagactggattcctgtaaggacgacgagtactacgagcagtctaca
gacgttcgctcgcagcttcgcttcttcgagcagctggagagaatcgagaagcagaggaag
gacgaacaggagagagagatccttttgaaggctgctaaaagtcgatccaggcaagaagac
ccagagcaagctcggctgaaacagaaagctaaggagatgcaacagcaggaactggcccag
atgaggcagcgagatgccaacctcacagcgctagccgccatcggacctcgaaagaagcgc
aaagtggactctccgagggcacaaccatcagggacagaggtttccggaggctctgcaggc
tctccagccagctcctccactctgtcctcgtcatcccgccagtacacgaggcagcgcatc
actcgggtcaacctcagggacttagtattctacctggaacaagagagagaatccacccgc
tccctcctcctctaccgagccctcctcaagtag
DBGET
integrated database retrieval system
