Oryzias latipes (Japanese medaka): 101159019
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Entry
101159019 CDS
T02443
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X3
KO
K14946
RNA binding protein fox-1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101159019
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101159019
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
101159019
NCBI-ProteinID:
XP_004071861
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All DBs
Position
8:complement(20400113..20455171)
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AA seq
461 aa
AA seq
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MLMSTDVASLMLPVNRGIMDRERDIETAAAAPHANAAGGPAAVRGMKRGDPEPDAQTAAA
LTDLAGAECKRPRIDGTGSVVGDIGQNNEPLNPGFHGYPPHSQGSQDSTGGQEALVAPPF
AAFPPPPPPQNGLPGAEFGPGAMFGAGGQGSAELGVGANGAATTPNSNNAKTEEVPQGEP
GVQCAAGGAGGSAGDSSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER
GSKGFGFVTFENSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALST
LPYGWKLSPMVGAVYGPELYAVPGFPYPSAAAAAATTAAAAFRGAHLRGRGRPVYSAVRA
AVPQAAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAYRYAQPAAVTGATAAAAAYS
DSYGRVYTTDPYHALAPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccctaatgctacccgttaaccggggaataatggac
cgcgaaagagacattgagacagcagccgcggcgcctcacgccaacgcagccgggggtccg
gcggctgtccgcgggatgaagcggggggaccccgagcctgacgctcagacagccgctgcc
ctcaccgacctggccggagcggagtgcaaaagaccaaggatagacggcaccgggagcgtg
gtgggagacatcggacagaacaatgagcctttaaaccctggtttccatggatacccacct
cacagtcagggctcacaggattcgactggaggacaggaggctctggtagctccacccttt
gcagccttccctcctccacccccgcctcaaaacgggctaccaggagcggagtttggcccg
ggggccatgtttggagctgggggccaaggttcagcagagctaggggttggtgctaatgga
gccgctaccacacccaacagcaacaatgcaaagacagaggaggtgccccaaggtgagccg
ggtgtacagtgtgctgcaggaggagcgggagggtctgccggagactcctcagaggccaaa
gggaccccaaaacgcctccatgtctcaaacatccccttccgctttcgtgatccagacctg
aggcagatgtttgggcaatttgggaagattttggatgtagagattatattcaatgagagg
ggttcaaagggctttggctttgtgacatttgaaaacagcgcagatgcagagaaagccagg
gaaaagctgcatggcaccctggtagaaggacggaagattgaggtgaataatgccaccgcc
agggtgatgactaacaagaaaatggtcagcccttaccctaacggagaggctctcagcacg
ctgccctatgggtggaaattgagtccaatggtgggggccgtgtacggaccggagctttat
gcagttccaggttttccatacccctcagccgcagcagctgcagccaccacagcagcagca
gcatttcgcggcgcccacctccggggccgcggccggcccgtttacagcgccgttcgggcc
gccgtgcctcaggctgccattcctgcctaccctggcgtggtgtatcaggatgggttttac
ggagcggcagacctctatggaggttaccctgctgctgctgccgccgccgctgccgccgcc
taccgctacgcccaacctgctgccgtaaccggagcaaccgctgcagctgctgcctacagt
gacagttatggtcgggtgtacaccacggatccataccacgccctggctccagccgccgct
gcgtacggagtgggagccatggccagtttatatcgagcgggatacagcaggtttgctcct
tactag
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