Oryzias latipes (Japanese medaka): 101159826
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Entry
101159826 CDS
T02443
Symbol
rbfox3
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101159826 (rbfox3)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101159826 (rbfox3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
101159826
NCBI-ProteinID:
XP_023813034
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All DBs
Position
8:complement(1289269..1582671)
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AA seq
491 aa
AA seq
DB search
MLMLAFIARKVNREEQGEEGARATARERGGGTRSASARSSPPRRIFSRRAKARPNREILG
GEKTRNKESDPRRGRERKRSGRARSRGRKKRISRSMRKASRHPALSSMANSGCLLLSGSG
MLPHALQCPPAFLYLPEGNQEATNPPEAMAQPYTPAQYPPPPQNGIPAEFAAPHPLPAQD
YTGQSRVPEHAMTLYTPTQTHSEPAGTDNSTPAIPASTTAPVSVLHHLQTLSSPRCQQTD
DVTQTEGSQQLQLQHSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE
RGSKGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKVANPYTNGWKLN
PVVGAVYGPELYAVTGFPYPATGATVAYRGAHLRGRGRAVYNTFRTAPPPPPIPAYGAVV
YQDGFYGAEIYGGYAAYRFAQPATTAAYSDSYGRVYATADPYHHTIGPAATYSVGTMASL
YRGGYSRFTPY
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgttggcttttatcgcgcgcaaagtaaacagagaggagcagggagaggaggga
gcgcgtgccacagcgagagagagaggaggaggaacacgctcagcgtccgcgcgcagctcg
cctccccgccgcatcttcagtagacgcgccaaagcccggccgaaccgggagattctggga
ggagagaagacaagaaacaaggagagcgatccgcggagaggcagagagaggaagaggagc
gggcgcgcgcggtccagaggaaggaagaagaggatctcccgctcaatgcgcaaagcgtcc
cgccaccccgcgctcagctccatggccaactccggctgtctgctgctctccggctccggg
atgctgccgcacgcgctccagtgcccccccgcgttcctctaccttcccgagggtaaccaa
gaggccaccaaccctccagaagcgatggcccagccgtacaccccagcccagtacccgccc
cccccacagaacgggatccccgcagagttcgcggcgccccacccgctcccggcgcaggac
tacaccgggcagagccgggtcccggagcacgccatgaccctgtacacgcccacacagacg
cacagcgagccggccggcaccgacaacagcacgcccgccatccccgccagcacgaccgca
ccggtcagtgtccttcaccacctgcaaactctgtcctcacctcgctgtcagcaaacagat
gacgtgacgcaaacagagggctctcagcagctccagctccagcactcagactcctcagag
aagcagcagcccaaaaggttacatgtctccaacattcccttccgcttccgagatcccgac
ctgaggcaaatgtttgggcaatttggaaagattttagatgtggagattatctttaatgag
cgaggatccaagggcttcggctttgtaactttcgaaacaagcacagacgctgatcgtgcg
cgggagaaacttaacggtacaatcgtagagggacgcaaaatagaggtgaacaacgccaca
gcgcgggtgatgacaaacaaaaaggtggccaacccctacacaaacggctggaagctgaat
cctgtagtaggagctgtctatggtcctgaactgtatgctgtcacagggtttccgtaccct
gccacaggcgccacggtggcctatcggggcgctcacttgcgaggccgagggcgggctgtc
tacaacacgttccgcacagctccgccgccaccacccatccctgcttacggagcggtggtg
taccaagatggcttctacggcgcagagatctatggcggctatgcagcgtacagatttgcc
cagcccgccaccaccgccgcttacagcgacagctacggcagagtctatgcaacagcagac
ccctaccaccacacgattggccccgccgccacgtacagtgtggggaccatggctagcctt
tacagaggagggtacagtcgcttcactccctactaa
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