Oryzias latipes (Japanese medaka): 101160412
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Entry
101160412 CDS
T02443
Name
(RefSeq) LIM homeobox transcription factor 1-alpha isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101160412
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
101160412
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101160412
NCBI-ProteinID:
XP_023813258
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Position
8:complement(9083948..9098834)
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AA seq
418 aa
AA seq
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MLPTEISGGVCFTSSDHTEVMREGMKTEERQQSCLQQPPSSTPFGPDYRGGGEVCAGCES
PISDRFLLRVNERSWHETCVKCAVCLSTLTGTCYCRDRLLYCKLDYEKLFVRKCSACLQV
IGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDYEKEREMLAAISP
TPTESVKSEDEDGGGGSGSGKGGDESKEHKRSKRPRTILTTQQRRAFKASFEVSAKPCRK
VRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQEQLGGTRRGPSRGGRQ
SNDDSEDGSSTHGMDGILGYPSLPRQQLLSLDPNIYAGEPFRHGLTPPQLSSEQLHSYDF
FFFPATESETVFHDLDSDGSLGHLGDCLLATGEGGLLPGRVGNPIDRLYSMQNSYFAS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaactgagatttctggaggagtgtgtttcacctcaagcgatcacactgaagta
atgagagaagggatgaaaacagaggagagacagcagtcctgtctgcaacagcctccatcc
tccacgcctttcggtccagattacagaggagggggagaggtgtgcgcgggctgcgagtct
cccatctcggaccgcttcttgctgcgcgtgaacgagcgctcctggcacgagacctgcgtc
aagtgcgccgtgtgtctgagcacactcaccgggacctgctactgcagagaccgcctgctg
tactgcaaactggactatgaaaagctctttgtgaggaaatgcagtgcctgcctgcaggtg
atcggccgatcagaacttataatgcgtgttctaggccaggtgtaccacttggggtgcttc
agctgctgcgagtgtgagcgccggctgcagagaggtgatgagtttgtgctgaaagaaggc
cagctgctctgccgcatggattatgaaaaggagagggaaatgctggctgctattagccca
acaccaactgaatcagtgaaaagtgaagatgaggatggcggaggaggctctggcagtgga
aaaggtggggatgaaagcaaggagcacaagcgctcaaaacggccacgcaccatcttgacc
actcagcaacgacgagctttcaaggcctcctttgaagtgtcagccaagccttgtcggaaa
gtcagagagacactggctgctgaaactgggcttacagtccgtgttgtgcaggtgtggttc
caaaatcaaagagccaagatgaaaaagatagctcgcaggcagcagcagcaacagcagcag
cagcaggagcaagagcagctgggggggacccgaagaggacccagcagagggggccgccaa
agcaatgatgacagtgaggatgggtctagtactcatggcatggatgggatactaggatat
ccatctctgccaagacagcaactactttcactggatcccaacatctatgctggagagcca
tttcgacatgggctcacacctcctcagctgagtagtgagcagctccactcctatgatttc
tttttttttcctgctacagaatctgagacggtcttccatgatttggatagcgatggaagc
cttggtcaccttggtgactgtctcttagcaacaggggagggcggcctactcccagggaga
gtgggaaaccccattgatcgtctctactccatgcagaactcctactttgcctcttga
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