Oryzias latipes (Japanese medaka): 101167534
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Entry
101167534 CDS
T02443
Symbol
lrrc4
Name
(RefSeq) leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101167534 (lrrc4)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
ig
V-set
LRRNT
Ig_2
Motif
Other DBs
NCBI-GeneID:
101167534
NCBI-ProteinID:
XP_023811678
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Position
6:complement(19901631..19905458)
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AA seq
665 aa
AA seq
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MSPLGQVSVQPTWNTALLAVISLMVPALSMCQSTGPESGFVNPQNCPGVCSCTNQLTKVV
CTRRGLIRVPPNIPTNTRYLNLMENSIETIEADTFRHLRHLEVLQLGRNAIRQIEVGAFN
GLASLNTLELFDNRLTVIPSGAFEYLSKLRELWLRNNPIDSIPSYAFNRVPSLMRLDLGE
LRRLEYISEGAFEGLHNLKYLNLGMCNLRELPHLSPLVGLEELEISDNVFPELKPWAFHG
LKNLRKLWIMNSAITTIERNAFDDITALVELNLAHNNLSSLPHNLFTPLQYLVELHLHHN
PWSCDCDVVWLSAWLRENIPTNSTCCGRCHTPIHIRGRHLVEIDQTTFQCSAPFILDAPR
DLNISAARVAELRCRTAAMSSVRWLLPNGTVLTHGSAHPRISVLNDGTLNFSNVLPSDTG
IYTCMVSNMAGNSNASAYLNISNAELNTSNLSYFTTVTVEVLDPTVEETPKPKPTVPASP
SVFQPVFISTPTVLFQNTQTPRQVSVPSPRAPAEPAASLDEMMKTTKIIIGCFVAVTLVA
AAMLIAFYKLRKRHQQRSTVAAARTIEIIQMEEQVPPVPPTSRSSGSDDTGLALPTLVEH
NSNTFKPGFVASSSSSRQGSYRAHWTQNNSLHRSVREHHGHISTIADPYVITTTQGKEKV
QETQI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctttgggccaggttagtgtgcagcctacctggaacacagccctgctcgccgtg
atctccctcatggtgcctgctctcagtatgtgccaatccacaggccctgagtcgggcttt
gtaaacccacaaaactgtccaggtgtgtgctcctgcactaaccagctcaccaaggttgtc
tgtacccgccgtggcttgataagagttcctccaaacatcccaaccaataccaggtatcta
aacttaatggagaacagcatagagaccattgaggcagacacgttcagacacttgcgtcat
ctagaagtgctgcagttgggaaggaacgcaatcagacagattgaagtaggggccttcaat
ggcctggccagtctcaacactctggagttgtttgacaacagactgacagtcatacccagt
ggagctttcgagtatctgtcaaaattaagagaactgtggctcagaaataatcctattgat
agcatcccttcttatgccttcaatcgtgtcccctcactcatgagactagaccttggggaa
ctgagaagattggaatacatctctgagggggcatttgagggccttcataacctcaagtac
cttaatttgggaatgtgcaatctaagggagttacctcatctgtcacctttagtgggattg
gaagagttggagatatcggataatgtttttccagagttgaagccttgggccttccatgga
ctcaaaaatttacgtaaactatggattatgaattctgccataacaacgattgaaaggaat
gcttttgatgacatcacagctttggttgaactcaatcttgctcataataatctgtcatct
ctgccccacaacttgtttactcctctacagtacctggtggaactacatctacatcacaac
ccttggagctgtgactgtgatgtagtttggttgtcggcatggctcagagaaaacattccc
acaaattccacctgctgtggccgctgtcacacccctatacacataagaggaagacacctg
gtggaaattgatcagacaactttccaatgctcagccccgttcatactcgatgctccaaga
gatctgaacatttcggctgcaagggtggcagaactaaggtgccgcacagcagccatgagt
tcagttcgatggcttctgcccaatggaactgtgttgacccatggctcagctcacccaaga
atatcagtgctcaatgatggaaccctcaacttttccaatgttctcccatcagatacggga
atctacacgtgcatggtgagcaacatggcaggaaattccaacgcctctgcctacttaaat
atcagcaatgctgaactcaatacatccaatctgtcatactttaccactgtaacagtggaa
gtgctggatccaacagtggaggagacgcccaagcctaaacccactgtccctgcttcaccc
tctgtctttcaacccgtcttcatctccacacccactgttttgtttcaaaacactcagact
ccaaggcaggtatccgtcccaagtcccagagcccctgcagagccagctgccagcctggat
gagatgatgaaaaccaccaaaatcatcattggctgttttgtagccgttaccttagtggca
gctgccatgctgatagcattctataaattgcgtaagaggcatcagcaaaggagtactgtg
gcagcagccaggaccatagaaataatacagatggaggaacaagttccccctgtcccaccg
acatctagatctagtggttctgatgacacaggattggcactgccaacattagtggaacac
aacagcaacacatttaagcctggttttgtcgcgtcttcttcctcatctcgacaaggaagt
tacagagcccactggacccagaacaactctcttcatcgttcagtcagagagcatcatggt
cacatcagcaccattgctgatccatatgttattacaactactcaaggaaaggaaaaggtt
caggagactcaaatctga
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