Oryzias latipes (Japanese medaka): 101170771
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Entry
101170771 CDS
T02443
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101170771
Membrane trafficking [BR:
ola04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
101170771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
101170771
NCBI-ProteinID:
XP_004073942
LinkDB
All DBs
Position
11:complement(2055801..2092155)
Genome browser
AA seq
1403 aa
AA seq
DB search
MSEKMEISNELFESVKEAVGRRVKLTLRHKVQLEVKGEKVESRVLALASHRAYLLTARVP
SKVEQSFSYLEIHGVCSNKPNQLVLEHERGPWSLRLGSADEVDEVVAHIGSCLQQICPAG
SPGKLMRKLSLNPPERTAVLQALWAEQSSSDLGPCGGFSHQYWCVCDYLGLPYREEVQWD
VDTIYLTQDTKELNLQDFAHLENRDLVAIIAVLEYNQWFTKLSTKDYKLSADVCDQILRV
VARSSRLEELMLDGAGLRSDFAQKLASALAQNPSSALHTFNLSNNSLEDKGVSALSAQLA
KLPLGFKHLNLSRTSMSPKGVNSLCQALCANPVVASTLTHLDLSGNSLRGDDITNLHSFL
SHPNCLQTLDLSNSDCSLELICGTLSKGCLKHLSVLNLSKSVFSHRKCKEIPPSFKQFFS
CAQALTSVSLSGTKLPHEALKALLLGLGCNPNLSDVSLDLSCCELRSGGSQVLEGCIAEI
PNISSLDISDNSLDMDLVTLLVWLSKNRSIRHLSLGKNFNNIKSKNVAQVLNNLVLMIQE
EDSPLTSLSLAESKLKADISIVLNALGSNTSLTKLDISGNSMGDMGAKILSKALQINSKL
RTLVWDRNNVSSQGLQDVAAALEKNYTIRFMPVPIMDAAQALKANPEKTEDALLKMERYL
LRNHETRKYVQEQAYRLQQGIVTTTTQQMMDTMCVKVQDHLNSLRFTETNSVQEDMKVAV
NLMKDARNSKTLLRNLYHLGGSRGTCVGAIQEKLESMAGEMAGVMDEQLQAMLVSMVDSA
EGLCSHVMKKSGLRQELLKAGAGRVTVPRGFITTTLVEQAGADIMNKISEVKLAMASLLS
DRIVDEILEALSSSQHTLAEHLIRKDQSVLHHEAQTETGVLEERLLPSEKHELEGLDPCT
MTPKSKRKSILVRMLRPISVAFELEFDLDKALEEVPIHVEDPPPPPGPSQASDRMSYCGG
ELPPPPTPSLGGFGELPPVELKTLENCTKNRPKPKRRMKPSRPHRQSIAPQEAEQNSMMG
KLDEGLDDFYSKKVVRLSFRLPSVKASPPQENTDKKRESRMSGIFNLIKSRTSKSNSTAT
SPLPTSPSAQPVLSVSSVAEETPASSPTPPGKVPAVAAAAAAAAAEPQQELHKSRTQSSN
LKDPEKEAGLTAEVAGENKHKEALEKAEPVERKEHPVTQRHVGVPMMGKDLLAEMKARQG
RTRQEKLPDKKLEPGSEPEKVNKVKPEVSATVPADTEDSRPEPVPRSKPLSTSPKPPLVS
RTSGLLSPTPPKPSSPAVPDDAMDPAGVSSPKAPLPAPRLKRTQSEQDRENGGGSSTGPP
SPPHVDSAADGDSFEQQITESGGGGGGRQWSSLKSSSSLPPHREEELRTLSQADSDSADA
EIPASPVDLSKSDDDSGNESPPL
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaaaatggagatttccaacgaactgttcgagagcgtgaaggaagcggtgggt
cgcagggtgaaactgaccctgaggcacaaggtccagctggaggtcaaaggtgagaaggtg
gagagcagagtgctggctctggcgtcacatcgagcttatttactcacagccagagtccct
tctaaggttgaacagtcattcagctacttggaaattcatggagtttgcagcaacaaaccc
aatcagctggtgttggagcacgagcgcggcccctggagcctccggctgggctcggcggac
gaggtggacgaggtggtggctcacatcggcagctgcctgcagcagatctgccccgctggc
tcccccgggaagttgatgaggaagttgagtttaaatcctccagaaaggaccgcagtcctg
caggctctctgggctgagcagagctcctctgacctggggccttgtggcggcttctctcat
cagtactggtgtgtgtgcgactacttggggttgccatacagggaggaggtccagtgggat
gtggacacaatttatctgactcaggacaccaaagagctcaaccttcaagactttgctcac
cttgaaaacagggatttggtggcaatcattgcagttttagaatacaaccagtggttcaca
aaactctccactaaagattacaaactgtccgctgacgtgtgcgaccagattttgagagta
gtggctcgatccagccggctggaggagctcatgctggacggcgctggactcaggagcgac
tttgcacagaagttggcgtccgctctggcacaaaacccttcatcggcgctccacacattc
aacctgagcaacaactcactggaggacaaaggtgtttctgctctgagcgctcagctggcc
aaacttccactgggcttcaaacatctgaatctttccaggacctccatgtcacctaaaggt
gtgaacagcctctgtcaggctctgtgtgctaacccggttgtggcctccactctcacacac
cttgacctgtctggaaactccctccgaggcgatgacatcacgaatttgcacagcttcctg
agtcaccccaactgtctgcagactctggatctgtccaacagcgactgttcgctggaactg
atctgtgggaccctttctaaaggctgcttaaagcatctgtctgtcctcaacctgtcaaaa
agtgtgttttcccacaggaagtgtaaagaaatccctccatccttcaagcagttcttcagc
tgtgctcaagctctgacgtctgttagtctgtcaggaaccaaactgcctcacgaggcgtta
aaggcattgttgttgggcctgggctgcaaccccaacctgagtgacgtgtccctggatctg
agctgttgtgagctgcgctctggaggctctcaagtcctggaaggctgcatcgctgaaatc
ccaaatatttccagtctggatatttctgacaatagtttggacatggatctggtcactcta
cttgtctggctgtccaaaaaccgctccattcgacacctttccctgggaaaaaacttcaac
aatatcaaatccaagaatgtggctcaggtcctgaacaatctggttctaatgattcaagag
gaggattcacccctgacctccctgtccctcgccgagtcgaagctgaaggccgacatttcc
atcgtcctcaacgctttgggcagcaacacctctctgaccaaactggacatcagtgggaac
tccatgggagacatgggggctaaaatactgtccaaagccctgcagatcaacagtaagctg
aggaccttagtgtgggaccgaaacaatgtcagttctcagggtctgcaggatgtagcagct
gccttggagaagaactacacgatccgattcatgccggttcccatcatggatgctgctcag
gctctaaaggccaatccagagaagaccgaggatgccctattgaagatggagcggtacctg
ctgagaaatcacgagacccgtaaatacgtccaggagcaggcgtacaggctgcagcaggga
atcgtcaccaccaccactcaacagatgatggacaccatgtgtgtcaaagtgcaggatcac
ctgaactctctgaggttcactgagaccaactctgttcaagaggacatgaaagtggctgtg
aacctcatgaaggatgccagaaactccaaaactcttctgcgtaacttgtaccacttagga
gggtccagaggtacgtgtgttggagccattcaggaaaaactggagtcgatggctggagaa
atggccggagtgatggacgaacagcttcaggccatgctggtgtccatggtggactctgca
gaaggcctgtgttctcatgtgatgaagaagagcggccttcgtcaggagctgctgaaggcc
ggagcggggagggtgaccgtaccccgcggcttcatcaccaccacgctggtggagcaggcg
ggggccgatatcatgaacaagatcagtgaagtcaaactggccatggcgtcgctcctgtcc
gaccgcatcgtggatgagatcctggaagctctttcctcctcgcagcacactctggctgag
catctgatcaggaaggaccaatctgtgctgcatcatgaagcccagacggagacgggagtc
ctggaggagaggcttttgccttcagagaaacacgagctggagggtttagacccgtgcacg
atgactcctaaatcaaagaggaagagtattctggtccgaatgctgcggcccatatctgtg
gcatttgagctggagtttgacctggacaaagctctggaggaggttcccatccatgtggag
gatcctcctccgcctcccggcccttcccaggcgtcggacagaatgtcgtattgtggcgga
gagctgcccccgcctcccacgccatcactcggcggctttggcgagctgccgcccgtggag
ctcaaaacgctcgagaactgcaccaaaaaccgtccaaaacccaagaggaggatgaaaccg
agcagaccccatcggcaaagcatcgctccacaggaggcggagcagaacagcatgatggga
aagctggatgagggcctggatgacttttactccaagaaagtcgtgaggctgagcttcagg
ctgccttcagtcaaagcctcccctccccaggagaacacggataagaagcgtgaatccaga
atgagtggaatctttaacctcatcaaatctcgcacctcaaagagcaacagcaccgccacg
tccccccttcccacctccccctccgcccaacccgttttatccgtcagctcggtagcggag
gagacccccgcgagttcgccaactccacctgggaaagtccctgccgtcgccgccgccgcc
gctgccgccgctgccgagcctcaacaggagctccacaaaagcaggacacagtcctccaac
ctcaaagatcccgagaaggaggccggcctgacggctgaagtcgctggggagaacaaacac
aaggaggctttggagaaggcggagcctgtggagaggaaagaacacccggtcacgcaaaga
catgttggagttcccatgatggggaaggacctgctggctgagatgaaggccaggcagggg
agaacgcggcaggaaaagctccccgacaagaagcttgagcctggatctgaaccggagaag
gtcaacaaagtcaaaccagaggtttctgcaacggtcccagcagacacggaggactccaga
ccagaaccagttcccagatccaaacctctgagtaccagccccaaaccccccctggtatcc
cgcacatctggactcctaagcccaactccccccaaacccagcagccctgctgttccggat
gacgccatggatccagcgggggtctcgtctcccaaagcaccactgcctgccccccgccta
aagaggacgcagtcggagcaagacagggagaacggtggcggcagctccacggggcccccg
tctccaccccacgttgattctgcagcagatggagactcctttgagcagcaaattaccgag
agcggcggtggcggcggcggcaggcagtggtcctctctgaagagttcctccagtcttcca
cctcaccgggaggaagaactgagaactttgtctcaggcggactcggactcggctgacgca
gagattcccgcttcgccggtcgacctcagtaaatccgacgatgactctggtaacgagtct
cccccgctgtga
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