Oryzias latipes (Japanese medaka): 101172601
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Entry
101172601 CDS
T02443
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101172601
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101172601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
Prok-RING_4
PMEI
PI3K_P85_iSH2
zf-RING_6
DUF5344
Y1_Tnp
DUF4407
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
101172601
NCBI-ProteinID:
XP_004076674
UniProt:
H2M9E3
LinkDB
All DBs
Position
14:complement(21695407..21699069)
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AA seq
572 aa
AA seq
DB search
MSFEQDACFLCKEDLRDPVSIPCGHIFCSICLKTYWDHADHTGSYLCPQCKVNYNKRPTP
RRIGGSRYGTLNRNSEPFPPPPPSPDYNYAGPQDVGCDICIGKKHKAIKTCLMCLASYCE
KHLKPHFESATFKRHKLVDEIGHLDRQICPQHQKGLELFCRTDQMCICVLCTVKEHKGHD
MVSAEQERAEEQQRLGATQAEIQEKIHDRLKQMEELKQAVDSLKNSAQRALQECEKMFGD
MMRSIERMQQEMAKLISTNKRAALSNAEGHMERLNHEIADLKRRDSEITQLSRTEDHIHF
IQTYHMLIAQTEAEELPSVTVNPYFSFGPVTKAVSEMKQHMNEFSNDELVKVAKTVNKMS
FCELDDAKKKRSIKAEEAPMYKSMPVREPQYRDDFLRYACQLTLDPNTAYRQLYLSRGNR
KATLKRDTQSYSDHPNRFDSLPQVLCKEPLAGNAFYWEVDWSGEGAAIGIAYKGIKRTGY
GDHARIGHNRKSWSFFCSDSSYSARHSKDQVEINAPYCPRIGIFLDHVGGTLSFYAVGDT
MSLLHTFKASFSEPVYPGFWVWYESAVTIVQL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgagcaagacgcatgcttcctctgtaaggaggacctcagggaccctgtgtcc
atcccatgtggacatatcttctgctccatctgcctgaagacctactgggaccatgctgac
cacacaggctcatacctctgtccgcaatgcaaggtcaattacaacaaaaggcctacgcca
agacgcataggaggctcccgctatggaaccctcaaccgcaactccgagccctttccgcca
ccgcctccttctcctgactacaactacgctggaccccaggatgtaggctgtgacatctgc
atcggcaaaaagcacaaagccatcaagacgtgcctgatgtgcctggcttcctactgtgaa
aagcatctgaagcctcactttgagtcagctaccttcaagaggcacaagctggtggatgaa
atcggccacttggaccggcagatctgtccgcagcatcagaagggtctggagctgttctgt
cgcactgaccagatgtgcatttgtgtgctgtgcacggtgaaggagcacaagggtcacgac
atggtgtcagctgagcaggagagagccgaggagcagcaaaggcttggtgccacccaggca
gagatccaggagaagattcatgaccgtctgaagcagatggaggagctcaaacaagctgtg
gactcactcaagaactcagcccagagagcgctgcaggaatgtgagaagatgtttggggac
atgatgcgctccatcgagaggatgcagcaggagatggccaagctgatatccaccaacaag
agagcggcactgagcaatgccgagggccacatggagcgcctgaaccatgagatcgctgac
ctgaaaagaagagacagtgagatcacccagctgtcccgcactgaagaccacatccacttc
atccagacttaccacatgctgatagcccagactgaggctgaggaactgccttcagttact
gtcaacccctacttctcctttggccctgtgaccaaggccgtgtctgagatgaagcagcac
atgaacgaattcagcaatgatgagcttgtgaaggtggccaagacagtgaacaaaatgagc
ttctgtgaactggatgatgccaaaaagaaacgatcaatcaaagctgaggaagctcccatg
tacaagtccatgccggtcagagagccccagtaccgggatgacttcctgagatatgcctgc
cagctcactctggatccaaatacggcctacagacagctctacctgtctcgtggaaacagg
aaggccaccctcaagagagacacgcagtcctacagcgatcaccccaacaggttcgactcc
ctgcctcaggttctgtgcaaagagccccttgctggaaatgctttttactgggaggtagac
tggagtggggagggggcagccataggaattgcctacaaaggcatcaagaggacaggctac
ggtgaccacgcccgcatcggtcacaaccgtaaatcctggagcttcttctgctctgactcc
agttactcggcccgccatagcaaggaccaagttgagatcaacgctccgtactgcccccgc
atcgggattttcctggaccatgttggaggaaccctctccttttacgctgtgggggacacc
atgtctctcctccacacttttaaggcctccttcagcgaacctgtttatccagggttctgg
gtttggtatgagtctgctgtcaccatcgtccaactgtga
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