Oryzias latipes (Japanese medaka): 101173161
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Entry
101173161 CDS
T02443
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101173161 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101173161 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101173161 (usp16)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101173161 (usp16)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101173161 (usp16)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101173161 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
101173161
NCBI-ProteinID:
XP_023817289
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All DBs
Position
13:7812135..7817937
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AA seq
837 aa
AA seq
DB search
MGKKRGKDRSSRGEDDDIELAVPSCRHIKTAADQSLLKKLPGISDWTNCQDCKHEDDTTL
QQDSEEEKEPAGIWMCLTCGHRGCGRHSENQHAIKHYETPRSSPHCLVISLDNWSVWCYI
CDDDVQYSRTGYLAQLVTNIKKQNAADPAKRPEKRVKDEASVLDYKENSETANTEESENK
ENSSTRYKNKNNMKESAGKTQNCITIEGSTVIPVKGLSNLGNTCFFNAVIQNLSQTQLLR
ETLNKVTGEKLNLDIKPASLDLEPIVVNLEQPGSLTWAMCHLLNEIQLSKKSVVTPRELF
TQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEQKRVNTGIMEALKLTNTDKDGDGLKTL
AKEYEKNGLPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVVDEAYRKKNQRK
GAQKSSESSQDGRNSPPLDSRNDDIPIAGTSKYQQKKAKKQAKKQAKHQKRQQKLESRIT
LDSLTDNTENEQTNATVDAEEAETNNKEQEGTSANDPTPDANSVSEQEKSGEQEEEEDDM
ADCDSLAASSSASNRFTVLSDERDSQDRVIHDKMSNEDQEEEDDSQLVSEMEKVTLDEAF
LEDCEAVDQNTESEEEVPDAKEYTVVNQDPELAFSTLAPRTAPEKQVCSIQTCLFQFTEV
ETLTLTNSLLCVTCTKQQQKKAKGQGPKKNVYTDALKQMLVSSPPAVLTLHLKRFQQNGY
TICKVNRYVHFPLTLDLAPYCAAKCKTNINVSSYKEDTGVLYSLYGVVEHSGTMRSGHYT
AYVKVRPNHHKTLSNGLSTEEPSIGSWFHISDTNVQPVSESKVQSCQAYLLFYERVL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagcggggtaaagacagaagctccagaggggaggacgacgacattgaacta
gctgttccatcctgcaggcacatcaagacagcagcagaccaaagtctgttaaagaagctt
cctgggatctctgattggacaaactgccaggactgtaagcatgaagacgacacaactctg
cagcaagactctgaagaggaaaaggaacctgcagggatctggatgtgcttgacatgtggc
cataggggatgtggaagacactctgagaaccagcatgcaatcaaacattatgaaactcca
cggtcaagtccgcattgccttgtgatcagtttggacaactggagtgtttggtgttacatt
tgtgatgatgatgttcagtactcgagaactgggtatttagcacagctggtgactaacata
aagaagcaaaatgctgcagaccctgcgaagagaccagaaaaaagagtgaaggatgaggcg
agtgttttggactacaaggagaactctgagactgcaaacacagaagaaagcgagaataaa
gagaacagcagtacgagatataagaacaagaacaatatgaaggaaagcgcggggaaaaca
caaaactgtatcacaattgaaggaagcactgtcattccggtaaaaggcctgagcaacctt
ggaaacacatgtttcttcaatgctgtcattcagaatctttctcaaacacaacttttaaga
gaaactctcaacaaagtgacaggagaaaaactcaatttggacatcaaacctgcatctttg
gacctggaacctatcgtggtgaatttagaacaacccggatctctgacgtgggcaatgtgt
catctgctgaatgagatccagctgtccaagaaaagtgtggtaacgccgcgagagttgttc
acacaagtgtgtaaaaaggctgccaggttcaaaggatttcagcagcaggacagtcaggag
ctgctgcgctacctgctggatgggatgcgggctgaagaacagaagagagtaaacacagga
ataatggaggcgttaaaactgacaaatacagataaagatggagacggactgaaaacacta
gcaaaagaatacgagaaaaacgggcttccaaaaaactttgtcgaccaagtttttggcggg
gagatgaccagcaccataatgtgtcagcagtgcaaaacggtgtctgtagttactgagatg
tttttggatctttctcttcctgttgttgatgaggcatacaggaagaaaaaccaaagaaaa
ggagctcagaagagcagtgagtcgagccaggatggcagaaacagtcctcctttagacagc
agaaacgacgacattcccatagcaggcaccagcaagtaccagcaaaagaaggcaaagaag
caggcaaagaaacaagcaaagcatcaaaaaaggcagcaaaagctcgaaagcagaataact
ttggacagtctgacggacaacacggagaacgagcaaacaaatgctactgtggatgcagag
gaagcagaaacaaacaacaaagaacaagaaggaacttcagcaaatgacccgacccctgat
gccaacagtgtgtctgaacaggagaagagtggggagcaggaagaagaagaagacgacatg
gctgactgtgactcgttagctgcatcatcctctgccagcaaccgttttaccgtcttatca
gatgagcgggactctcaggacagagttatacacgacaaaatgtccaacgaagatcaggaa
gaagaggacgactcccagctggtgagcgaaatggagaaagtaactctcgacgaagctttc
ttggaagactgcgaggctgtagaccaaaacacagagagtgaggaggaagtgcctgatgct
aaagagtatacagtcgtgaaccaggacccagagttggccttcagcacgttggctcccagg
acagctccagagaaacaagtgtgctccatacagacatgcctgtttcagtttacggaggtg
gaaacactcacgctgaccaacagcttgctgtgtgtcacctgcactaaacagcagcagaag
aaagccaaaggtcaaggccccaagaagaatgtttacaccgatgccttgaagcaaatgttg
gtctcctctcccccagctgtccttacccttcatctgaaaagatttcaacagaatggatac
actatttgtaaggtgaacagatacgttcactttccactcactctggatcttgctccttat
tgcgctgccaaatgcaaaaccaacatcaatgtatcttcttataaagaagatacaggggtt
ttgtacagtttgtatggtgttgtagagcacagtggaacaatgaggtcgggccattacaca
gcctatgtaaaagtccggccaaaccatcataaaactttatccaatggattatcaacagaa
gagccttccataggatcctggtttcatatcagcgacacaaacgttcagcctgtgagcgaa
agcaaagtccagagttgccaagcctacctcctcttctatgaaagagtcctctaa
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