Oryzias latipes (Japanese medaka): 105355227
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Entry
105355227 CDS
T02443
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105355227 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
105355227 (trim32)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105355227 (trim32)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105355227 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_2
Baculo_IE-1
zf-RING_4
zf-C3HC4_4
zf-RING_11
GIY_YIG_2
Haem_bd
Motif
Other DBs
NCBI-GeneID:
105355227
NCBI-ProteinID:
XP_011480036
LinkDB
All DBs
Position
12:complement(11626495..11632519)
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AA seq
682 aa
AA seq
DB search
MAAASSPLDPDLLREVLECPICLETYNQEQLRPKLLQCGHTVCRLCLEKLLANTINGVRC
PFCSKVSRMSSISQLADNITVLKIIDCTVSCSAAAAALMCKSCCSRLPRQYCHDCAMVLC
ELCKVEDHLHQGHSVQTIRLAAEQRRKELGGRLAVLRDVMGEIQKKKRAIENISKSLKLK
YRSFQQAYATAEQSIQEEMSRSRMAFTASMGEVEKINSQVLEEQAYLLNIAEVKVVSRCD
FLTMQVRQSDTALLKDDGPSCDDDELDLRSSLPSQFQLQEPGLVQVEHSKPLEVGHVTTN
TYTVNTDDQGGLEAAHDGDLDGVVATLGATGGAVGFSMDLYRDMDMVTGVEEAGCDSPAS
FKSKSMDAGGGSPAGASSGPPVCQFVKKMGCKGTLPGMFNLPVGICVTGQGEVLVADRGN
CRVQIFNRKGFQREIRRNASSIDNFVLSFLGADLPNLVPLSIAVTPQGLIGVTDNYDNSV
KVYTMDGHCIACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCLAVDRNVGVVSYNRLCS
AVRPKFVTCDAAGTVYFTQGLALNFEKRQNEPHLEGGFSIGSVGTDGQLGKQLSHFFSEA
EDFRCITGMCVDANGDLLVTDSGRKEILQFPKEGGFNVLIQDGLTCPVGVATTHKGQLLV
LDCWDHCVKVFTYIQRRHSSTS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcatcttcccctctggacccagacctattgagagaagtacttgagtgcccc
atttgcctggagacttacaaccaggaacagctgcgacccaaactcttacagtgtggccac
acagtatgtcgactgtgtctggagaaactgttggcgaacaccatcaacggcgtgcgctgc
cccttctgcagtaaggtctcccgtatgagcagcatctcccagctggcggataatatcact
gtgctgaagattatagattgcaccgtgtcctgcagcgctgccgctgctgcactgatgtgc
aaatcctgctgtagccgcctaccaaggcagtactgccacgactgtgccatggttctttgt
gagctgtgcaaagttgaggaccacctacaccaaggccactcagtccagaccataaggctc
gctgccgagcagcgccgtaaggaacttggaggcaggctggctgttcttcgtgatgtcatg
ggagagattcagaagaaaaagagagcaatagaaaacatttccaagtcgctgaaactgaag
taccggtcatttcagcaggcgtacgctacggcggagcaaagcattcaagaggaaatgagt
cgatcacgaatggcgttcacagcctcaatgggggaggtggaaaagataaactcacaggtc
ttagaggagcaggcatatctcctcaacattgcagaggtaaaggtcgtgtcacgctgcgat
tttctgactatgcaggtcaggcagagtgacaccgctttattaaaagacgacggccccagc
tgtgatgatgacgaactggatttgaggagcagtttgccttcacagttccagctacaagag
ccaggactggtccaagtggagcactccaaacctttagaagtgggtcacgtaaccacaaac
acttacactgtcaatacagatgatcaagggggtttagaagctgcacatgacggggatttg
gacggagtcgttgccacgctgggagccaccggtggtgctgtggggttttcgatggatctt
tacagagacatggacatggtgacaggtgtggaggaagcaggatgtgactcacccgccagc
tttaaatccaagtccatggatgcgggtggaggatcaccggctggggcaagttcaggccct
cccgtctgtcagtttgttaagaaaatgggctgtaaagggacactgcctggcatgttcaat
ttaccagtcggcatatgcgtaacaggacagggtgaggtgctggtggccgaccgtggcaac
tgccgcgtccagatttttaaccgcaaaggcttccagcgcgaaatccgacggaatgccagc
agcatcgacaacttcgtcctgagtttcctcggggctgacttgcctaacttggtcccccta
tcaatcgccgtgaccccacaaggcctgattggtgtcaccgataactacgacaactctgtc
aaagtgtacactatggatgggcactgcattgcttgccacaagaaccagttgataaagccc
tgggggatcacagccatgccatcgggccagtttgtagtgtcagacgtggaggggggaaag
ttatggtgtcttgcagtggaccgcaacgtgggcgtggtcagctacaaccgactgtgctct
gctgtccgccccaagtttgtcacatgcgatgcagcaggaacagtttattttactcagggc
ctggctctgaacttcgagaagcgtcagaatgagccccacctggaggggggcttctcgatt
ggttcagttggcacggacggccagctcggcaaacagctcagccatttcttttctgaggca
gaagactttcggtgcatcactggaatgtgtgtggatgccaacggggatctgcttgttaca
gacagcgggagaaaagaaatcctgcagttccccaaagaaggtggattcaatgttctcatc
caggacgggctgacctgccctgtgggcgtggccaccactcacaaaggacagttgctcgtc
ctggattgttgggaccactgtgtcaaagtctttacctacattcaaaggaggcattcttcc
acttcctaa
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