Osmia lignaria (orchard mason bee): 117609497
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Entry
117609497 CDS
T09775
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117609497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117609497
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117609497
Spliceosome [BR:
olg03041
]
Complex A
U2 snRNP components
U2 related factors
117609497
Complex B
117609497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
117609497
NCBI-ProteinID:
XP_034191792
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSATPEKKRRRSRSRDRDRDRERDKGRHRERRSRSRDRD
RERERERSDRRDRSERERDRERKGGDSKEKRLTGSKSSRSGKDRSNRSRSRERKEKEKGD
SDELPFDHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKASILANLQL
PMKKWSLEDDSDEETPVVQNSQKEAKEDGETKEEVEEVTEEVKGDDEEEVDPLDAFMAEV
QEEVRKVNKLDSKSGKSANNGTGTGSTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEY
SSEEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTAEEVEAYK
EELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIG
IAKTGSGKTLAFLLPMFRHILDQSPLTDGDGPIALIMTPTRELCMQIGRDSKKFTKSLGL
SHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSIVCKDVE
QHVVVLEEDQKFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGID
QCDRDSTILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAG
NKGYAYTFITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFS
GKGFKFDESEAALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPS
ASNIAVAGQPVASATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLIT
AKTVAEQLAAKLNTKLNYQPREEDLVESDAEAGEQTFRKYEEELEINDFPQQARWRVTSK
EALAQISEYSEAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEE
LIKLQASGAHTASRGRYKVL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagtagcgacaaggatagacatcacagaagacggtcgagatcgcgatcgagg
tctcgatcggccacaccggagaagaaacgacggcgttctaggagcagggatagggataga
gatagggaaagagacaagggccgacacagggaacgaagaagtcgttccagagacagagac
agagaaagggaaagagaaagaagcgacagacgagatcgttcagaaagggagagagatcgt
gagagaaaaggtggagacagtaaagaaaagcgtcttacaggctcaaagtcttcgcgttca
ggcaaagaccgatcgaatagatcgcgatcaagggagcgcaaggagaaagagaaaggcgac
agcgatgagttaccgttcgatcacactaaattggacaaggaggaagaacagaaaagattg
gaactggaaatgcaaaagaggagagaaagaatagaacggtggcgtgcagaacggaaaaag
aaggaactagaggcaactaagaaagatggtaaggcatctatattagccaaccttcagctc
cctatgaaaaagtggtccctcgaagatgacagtgacgaagagactcctgtcgttcagaat
agccagaaggaagcgaaagaagatggtgaaacaaaagaagaggtggaggaagttacggaa
gaagttaaaggcgacgacgaagaagaagttgatcctctcgatgctttcatggcagaggtt
caagaagaagttcgtaaggtgaacaaacttgatagtaaaagtggaaagagcgcaaataac
ggaacgggtacaggaagtactcaaagtggaggggttgttattgttaccggtgtggcgaaa
aagaaggtgcaaaagcaaaagggagaattaatcgaacaaaatcaagatggtcttgaatat
tctagcgaagaagaaggggaaaacttgcacgaaactgctgccggtattgcaaataaacag
aaacgagaattagcgaaagttgatcatgcaacgaccgagtaccagccatttagaaaatcg
ttttacgttgaagtacctgaaatcgcaagaatgacagctgaagaagtagaagcgtacaaa
gaagagttggaagggattcgcgtgaaaggcaaaggttgtccaaaacccatcaaatcatgg
gcccagtgtggtgtgacgaaaaaggagttggaagttttgaagaaactcggttatgaaaaa
ccaacgccgatacagtgtcaggctataccggcaataatgtctggtcgggatttgataggc
atagcaaagacaggtagtggaaaaacgttggcatttttgttaccgatgtttaggcatatt
cttgatcagtctccgttaacggacggcgatggaccgatcgcattgatcatgacaccaacc
agagaattgtgtatgcaaattggaagggactcgaaaaaattcaccaagtcgttgggactc
tctcatgtttgcgtttacggcggaaccggtatatccgaacaaatagccgaactaaagaga
ggcgctgaaataatagtctgtactcccggaagaatgatcgatatgcttgctgcgaatagc
ggaagggtgactaatcttcgtagagtaacatacgtagttcttgacgaagcggatagaatg
tttgacatgggtttcgagcctcaagtgatgcggatcatggaaaacgttcgaccggaccga
caaactgtattgttcagcgcgacgttccctcgtcaaatggaagcactagctagaaggata
ttgaccagacccgtagaagttcaagtcggaggacgatcgatcgtttgcaaggacgttgaa
cagcacgtggtggtcctcgaagaagatcaaaagttttacaagttgctggaaatccttggt
cattatcaggataaaggttctactataatattcgtcgataagcaagagaacgcggacact
ttattgaaagatctgatgaaagcctcttactcgtgtatgtcgcttcacggtggtatcgat
caatgcgacagggactcgacgatattagactttaaagctggtagaacgaaattgttggtt
gctacatccgtagctgccagaggtctagacgtgaaacacttggtgttggtagtaaattac
gattgtccgaatcattacgaagattatgtgcacagatgcggaagaacgggtagagctgga
aacaaggggtacgcgtatacgtttatcacgtcggaacaggaacgttacgctggcgatata
ctgcgtgctcacgaattggcaggagttccggttcccgaacctttgcgtcagctctgggaa
ggatacaaagcacgacaagcggcagacgggaagaaagtgcacaccggaggtgggtttagc
gggaaaggattcaagtttgacgagtccgaggcggcgttggccaacgagaagaaaaagttc
caaaaggcggctctcggtttgcaagattccgacgacgaagatatagagaacgacatcgac
cagcaaatagagagcatgctcgcgccaaaaaggacggttcgcgaaattgctagaccatca
gctagcaacatcgcggtagctggccagcccgtagctagcgcaaccgataaattagagttg
gctaggcggttggcctccaagatcaacatagcgaaaaatttgggagccgaggcaaaaggt
gctacgcaacaagctgccgaagctatacttaaaggagctggtcctaccaatctgattaca
gcgaaaacggtcgcggaacaactagcagccaagttgaacacgaaattaaactatcagcct
cgcgaggaagatctcgtcgagagcgacgcagaggccggtgaacaaaccttccgtaaatac
gaagaggaattagagatcaacgactttccgcaacaagctagatggcgagtaaccagcaag
gaagctctcgcacagatttccgagtactcggaagccggtctcaccgtcagaggaacttat
atcgctcctggcaaggctccgccagaaggagaaaggaaattatatctcgccatcgagtct
accagtgaattggcggtgagcaaagccaaggcggaggtttctcgactcatcaaggaagaa
ttgatcaaattacaagcgtctggggctcataccgcgtctcgtggacgatataaagttttg
taa
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integrated database retrieval system
