Olsenella uli: Olsu_0735
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Entry
Olsu_0735 CDS
T01285
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ols
Olsenella uli
Pathway
ols03410
Base excision repair
ols03430
Mismatch repair
ols03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ols00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Olsu_0735
03430 Mismatch repair
Olsu_0735
03440 Homologous recombination
Olsu_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ols03400
]
Olsu_0735
DNA repair and recombination proteins [BR:
ols03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Olsu_0735
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Olsu_0735
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Olsu_0735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
Helicase_C
DHH
DEAD
DHHA1
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
ADK67849
UniProt:
E1QZN5
LinkDB
All DBs
Position
827308..830661
Genome browser
AA seq
1117 aa
AA seq
DB search
MPGLLGSRRWELLPQDAAAERCLREGCGVSSLVARTLAARGVKDVDEARRFLTPSLERDW
ADPLLIPGMEGAAQRVGAALDRHETIAVFGDFDVDGMSATCLLTLALRKLGGDVHPYIPY
RFGEGYGLSDEALSRVIEGCDPDLIVTVDNGIAAREEVSHLGERGIDVVVTDHHEPAELV
PVGVPVTDPKIDPACVSRELAGAGVALKLVQVLGERRGQPDLWRRYTEVATLGTISDMML
LEGENRALVADGIAQMRQTRRPGIVALAATSGVDLSSITADELPFSLIPRLNAAGRMGTT
DVAFDLLLTDDAAVAAVLAGRLERTNAERREIESRLTDEAMEKVEATYDGGRVVVVGGEG
WHEGVKGIVASRIANRYHVPSILFTISDGVARGSGRSVGTVDLFRAVERCSDVLVRFGGH
AGAVGVTCAASNLDAFRSRLGEVMGQLPEEQFVDRGEVSAPVGLSEMSVEAIDSLEVLQP
FGQGNKKPLFAVHGVCMRNRTRVGASGNHLRFVATDGVNPVPAIMFRTPQIERACDCEAA
VDLVFEPVNETWQGRTKPKLMVRDILYRDAVDLCGDACEAATSLSDDLFSRAGETLSHDA
QGDAVPSDAPARRAQLGRLGTDELTDELRRAMIGDHALLPAQREALDRLAAGKSVLCVMA
TGRGKSLIFHIHAAREAIGRGRASVFVYPLRALVADQSYHLAGSFGRLGMSVRVLTGETP
LDERDDSFADLALGSVDVLLTTPEFLAIHAERFASSGRVGFVVVDEAHHAGVAKGGSRSS
YTALPRVLERLGGPVALAVTATAEEGVAREICRLLSINADDGVVVDRSVRENLHVVDYRG
LHDREAALVSVVATGMKTVVYVNSRERSVSLARMLRKNVPELGQRIAFYNAGLTREDRFR
VEAAFRDGRLSCIVSTSAFGEGVNLPDIRNVVLYHMPFGSIEFNQMSGRAGRDGDDAWVY
LLFGSRDARINERIICSAAPGRDDLVVLYRTLMTLAGRAGARDGETPLSMGNADIAQVAL
DVDPTARLDEHSVSCGISIFRELGFLGVSGYGPTRRISMAPSPERMRLERSIRYLEGLRS
RDAFSAFRDWVLTSGQQEMLERINKPITPGFGCVVDR
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
gtgcctggcctgctgggaagcaggaggtgggagctgctgccgcaggacgcggccgccgag
aggtgcctgcgtgagggctgtggcgtctcatccctcgtcgcgcgcaccctcgccgcgcgc
ggtgtcaaggacgtggacgaggcccgtcgcttcctcacgccctcgctcgagcgcgactgg
gcggaccccttgctcattcccggcatggagggggcggcgcagcgcgtgggcgccgcgctc
gaccgtcacgagaccatagccgtcttcggtgacttcgacgtcgacggcatgtccgcgacc
tgcctgctcacgcttgcgctgcgcaagctgggcggtgacgtccacccttacataccgtac
cgcttcggcgaggggtacggcctctccgacgaggccctctcccgtgtgatagagggctgt
gaccccgacctcatcgtcaccgtggacaacggcatcgccgcccgtgaagaggtctcccat
ctcggggagcgcgggatcgacgtcgtcgtgaccgaccaccacgagccagccgagctcgtg
cccgtcggcgttcccgtgacggatcccaagatcgatcccgcctgcgtctcgcgggagctg
gcgggcgcaggcgtcgcgctcaagctcgtccaggtgctcggcgagcggcgaggccagccg
gacctctggcggcgctacacggaggtcgccacgctcggcaccatctcggacatgatgctg
ctggagggcgagaaccgcgccctcgtggcggacggcatcgcccagatgcgccagaccagg
cgtcccggaatcgtggcgcttgcggccacgtccggcgtggacctgtcctccatcacggcc
gacgagctgccgttctccctgatcccgcgactcaacgcggctggtcgcatgggtacgacg
gacgtcgccttcgacctgctcctgaccgatgacgccgccgtggcggccgtgctcgccggt
cgcctcgagcgcaccaatgccgagcgccgcgagatagagtcgcggctcacggacgaggcc
atggagaaggtcgaggcaacctacgacggcggtcgcgtcgtcgtggtcggtggcgagggt
tggcacgagggggtcaagggcatagtcgcgagtcgcatagccaatcgctaccacgtcccg
tccatcctcttcacgatctccgatggcgtggctcggggctcgggccgctcagtcggcacc
gtcgacctcttccgtgcggtcgaacggtgctccgacgtgctggtccgctttggcggacat
gccggggcggtgggggtgacctgcgctgcctccaacctcgatgccttcaggtcccgcctc
ggggaggtcatgggccagctgccagaggaacagttcgtcgacaggggagaggtaagcgcc
cccgtcggcctctccgagatgagcgtggaggccatcgactcgctcgaggtgctccaaccc
tttggccagggcaacaagaaacccctgttcgcagtgcatggtgtctgcatgcgcaaccgc
acccgcgtcggcgcgtcaggcaaccacctgcgcttcgtggcgaccgacggcgtgaacccc
gtcccggccatcatgttccgcaccccccagatcgagcgcgcctgcgactgcgaggcggcg
gtcgacttggtgttcgagccagtcaacgagacctggcaggggcgaaccaagcccaaactc
atggtccgtgacatcctgtatcgggacgcggtcgacctctgcggcgatgcatgcgaggct
gccacgtccctctcggacgacctgttctcacgtgccggcgagaccctctcgcatgacgcc
caaggggacgcagtaccgtctgacgcgcccgcccgtagggcgcagctggggcgcctgggc
acagacgagctcaccgacgagctgcggcgcgccatgatcggcgaccatgcgctcctgccc
gcgcagagggaggccctcgaccgcctggctgccggcaagtcggtgctctgcgtcatggcg
acagggcgtggcaagtcgctgatcttccacatccacgccgcccgtgaggccatcggtcgc
ggcagggcgagcgtcttcgtgtacccgttgcgcgcgctcgtcgccgaccagtcgtatcat
ctggctggttccttcgggaggctgggcatgagcgtgcgcgtgctcacgggcgagacgccc
ttggacgagagggacgacagctttgcggacctggccctaggctcggtcgacgtgctgctc
acgacccccgagtttctggccatccatgccgagcgcttcgcgagctcggggcgcgtcggg
ttcgtggtcgtggacgaggcccaccacgcgggtgtggccaagggggggagccgcagctcc
tacactgcgctgcccagggtcctggaacgcctgggaggcccggtggcgcttgccgtgacg
gcgaccgccgaggagggtgtggcccgcgagatctgccgcctcctctccatcaatgccgat
gacggggtcgtcgtggaccggagcgtccgggagaacctccacgtcgtagactaccgcggg
ctgcacgaccgcgaggccgcgctcgtgtcagtcgtcgcgacgggcatgaagaccgtggtc
tatgtcaactcgcgcgagcgatcggtgtcactcgcgcgcatgttgcgcaagaacgtgccc
gaactggggcagcgcatagccttctacaacgccggcctcacgcgcgaggatcgctttcgc
gtggaggcggccttccgggacgggcgcctgagctgcatcgtatccaccagcgcctttggc
gagggcgtgaaccttccggacatcaggaatgtcgtgctctaccacatgcccttcggctcg
atcgagttcaaccagatgagcggccgggcgggacgcgatggcgacgacgcctgggtctat
ctgctctttggcagcagagacgcgcgtatcaacgagaggatcatctgctcggcggcccca
gggcgcgatgatctggtggtgctctaccggaccctgatgaccctggcgggacgcgcgggc
gcacgcgacggcgagacgcccctctcgatgggcaatgctgacattgcccaggtcgccctt
gacgtcgatcccacggcgcgtctggacgagcattccgtgtcctgcggcatctcgatcttt
cgcgagctgggcttcctgggcgtcagtggctacgggccgacccgtcggatctccatggcc
ccctcacccgagcgcatgcggctcgagcggtcgatacgctatctcgaggggctacgctcg
cgcgatgcgttttcggccttccgcgattgggtacttactagcggccaacaggagatgttg
gagcgtatcaacaagccgatcacgcccggcttcggctgcgtcgtagatcgatag
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