KEGG   Ostreococcus lucimarinus: OSTLU_14373
Entry
OSTLU_14373       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12878  THO complex subunit 1
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03013  Nucleocytoplasmic transport
olu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OSTLU_14373
  09122 Translation
   03013 Nucleocytoplasmic transport
    OSTLU_14373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_14373
   03041 Spliceosome [BR:olu03041]
    OSTLU_14373
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     OSTLU_14373
Spliceosome [BR:olu03041]
 Complex C
  Other components
   EJC/TREX
    OSTLU_14373
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    OSTLU_14373
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 5000380
NCBI-ProteinID: XP_001416269
JGI: 14373
UniProt: A4RSD1
LinkDB
Position
2:839767..842100
AA seq 777 aa
MRYGGGKEVVEATDRDGTSGRAALARLFEHALTLVEASESAVSGGMIFTTIEIVLEACTI
AEAEDVLLWCDENKTRLRETTIWKKGKLPTLRMLIALAKRCVGRSSDEARVKGRALVLIS
WFMGLSDRSGMNKNGDSNPETTAIFEQEEWLREELEDGVGVDADAKIKMEVDSGEGDVAA
DDDDNEFGVDDAFHRTFWSLQQYFQDPPTTMSKNGAWNSFHAILCVVLDKFEAFPLGETA
GTIDEEPESEKRKMIGHRFLTARRLLPLQMQDFVFRRQILIQAVFFLQYMDNEKFKEHVV
DDEVTELSERVMKILKRTGPNAVADAGIIENALEDELSWRKWKEQGCPSFEKQPIDFETE
PMPDNWDKKYSNWPPDQYPPDDPNLKHDFDHPELNRLWNLGEDDPNGTSVDALKEVSVEE
FLKPCLEEMDPSQQVEAEYRRVNDPTFRWKAMRMLSKNHLHLFPKIAAEGLESVVPDILG
VPDPRPPKEKSEEELAKESKPAEEGNVGTGGKHNLLGSHDEVLDGALEPIEGDVDMEEEE
KQPPVVEKATDEAKVEDKPKFTPPPPRHTVPKDAPATESAAKETPVKDEPVQDKKRERSP
EPSQETIKSDDTARQQGGRGGRGGRGGRGGRSQGNGRGGRGGRQRVTAVRPPPRQRSPPR
QRSPPRQRSPPRQRSPPRQPQSQHNRREPAGGRGGQRYSNPRQQGGQQQQYQRQGGRGQQ
QNAPAPPARQQQNLGKRRRDDGPDAGSQQAPADRGRPRARGNQGQRFSRPQHRNNRR
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgcggtatggcggtgggaaggaggtggtggaggcgacggatcgggacgggacgagcgga
cgcgcggcgttggcgcggttgttcgaacacgcgttgacgctcgttgaagcgagcgagagc
gcggtgagcggagggatgattttcacgacgattgagatcgtgctcgaggcgtgcacgatc
gcggaggcggaggacgtgctgctgtggtgcgatgagaataagacgcgcctgcgagagacg
acgatttggaaaaagggcaaactgccgacgcttcgaatgttgatcgcgctcgcgaagcgg
tgcgtggggcgaagctcggacgaggcacgggtgaaagggcgggcgttggttttgataagc
tggttcatgggtctgagcgatcgatcggggatgaataagaatggcgatagtaatccggag
acgacggctatttttgagcaagaggagtggttgcgggaagagctcgaggacggcgtcggg
gtggatgcggacgcgaagattaagatggaggtcgacagcggcgaaggtgatgtagcagca
gacgacgacgacaacgagtttggcgtagacgacgcgtttcatcgcacgttttggtcgctc
cagcagtattttcaagacccgccgacgacgatgtccaaaaatggcgcgtggaatagcttt
cacgccatcttgtgcgtggttctggacaagttcgaggcgttccctctgggtgagacggcg
ggaacgattgacgaggagccagaatcggaaaagcgaaaaatgattgggcatcgctttctc
accgcgagacgcctgctgcctttgcagatgcaggatttcgtgtttcgtcgtcaaatttta
attcaggcggtcttcttcttacagtatatggataacgaaaagtttaaggagcacgtcgtg
gacgacgaagtcacggaattgtccgagcgagtgatgaagatcttgaaacgcaccggaccg
aacgccgtcgccgacgctggcatcatcgagaacgccttggaagacgagttgagttggcgc
aagtggaaagagcaaggttgcccgagctttgagaagcaaccgatcgatttcgagaccgaa
ccgatgcctgataattgggacaaaaagtattcgaactggccgcccgatcagtatccaccc
gatgatccaaatctgaaacacgatttcgatcacccagagctcaaccgattgtggaattta
ggcgaagacgatccgaatgggacgtctgtggacgccttgaaagaggtgagcgtggaggag
ttcttgaaaccgtgcctggaagagatggatccttcgcaacaagttgaagctgaatacaga
agagtcaatgacccgacgtttagatggaaagccatgcgcatgctctcaaagaaccacttg
cacttgttcccaaaaatcgccgcggagggattggagagcgtcgttccagatattttggga
gtcccagaccctcggccgccgaaagaaaagagtgaagaagagctggcaaaggaatcaaaa
cccgcggaggaaggtaatgtcggcactggcggcaagcataaccttctcggttctcacgac
gaggtgctcgacggcgcgctggagccaatcgaaggtgacgtcgacatggaagaggaagag
aagcaacctccggtagtcgagaaagctacagacgaagcgaaagttgaagataagccgaaa
ttcacgccaccaccaccgcgtcatacagtgccgaaggatgctccggccacggaatcggcc
gccaaggaaacgccagttaaagacgaacccgttcaggacaagaagagagagcggtcaccg
gaaccgagccaggagacgataaaatcagacgatacggcgcgccaacaaggcggtcgaggt
ggtcgaggcggtcgaggtggccgaggtggtcgaagtcaaggcaatgggcgcggaggaaga
ggcggaagacagcgagtgactgcggtgcgaccgccgccacgccaacgttcgccgccgcgt
caacgttcgccgccgcgtcaacgttcgccgccgcgtcaacgttcgccgccgcgacagccg
cagtcgcagcataatcgtcgcgagcctgccggcggacgcggtgggcagcgatactccaat
cctcgccaacagggcggacaacagcaacagtatcagcgacaaggcggtcgtgggcagcag
caaaacgcgcccgctcctcctgcacgtcagcagcaaaatctcggtaaacgccgacgagac
gatggtccagatgctggttcgcaacaagcgccggcggaccgaggcagaccccgtgcgcgt
ggaaatcaaggtcagagattctctcgaccgcaacatagaaataataggcgatag

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