Ostreococcus lucimarinus: OSTLU_14373
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Entry
OSTLU_14373 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12878
THO complex subunit 1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_14373
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_14373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_14373
03041 Spliceosome [BR:
olu03041
]
OSTLU_14373
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
OSTLU_14373
Spliceosome [BR:
olu03041
]
Complex C
Other components
EJC/TREX
OSTLU_14373
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
OSTLU_14373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
5000380
NCBI-ProteinID:
XP_001416269
JGI:
14373
UniProt:
A4RSD1
LinkDB
All DBs
Position
2:839767..842100
Genome browser
AA seq
777 aa
AA seq
DB search
MRYGGGKEVVEATDRDGTSGRAALARLFEHALTLVEASESAVSGGMIFTTIEIVLEACTI
AEAEDVLLWCDENKTRLRETTIWKKGKLPTLRMLIALAKRCVGRSSDEARVKGRALVLIS
WFMGLSDRSGMNKNGDSNPETTAIFEQEEWLREELEDGVGVDADAKIKMEVDSGEGDVAA
DDDDNEFGVDDAFHRTFWSLQQYFQDPPTTMSKNGAWNSFHAILCVVLDKFEAFPLGETA
GTIDEEPESEKRKMIGHRFLTARRLLPLQMQDFVFRRQILIQAVFFLQYMDNEKFKEHVV
DDEVTELSERVMKILKRTGPNAVADAGIIENALEDELSWRKWKEQGCPSFEKQPIDFETE
PMPDNWDKKYSNWPPDQYPPDDPNLKHDFDHPELNRLWNLGEDDPNGTSVDALKEVSVEE
FLKPCLEEMDPSQQVEAEYRRVNDPTFRWKAMRMLSKNHLHLFPKIAAEGLESVVPDILG
VPDPRPPKEKSEEELAKESKPAEEGNVGTGGKHNLLGSHDEVLDGALEPIEGDVDMEEEE
KQPPVVEKATDEAKVEDKPKFTPPPPRHTVPKDAPATESAAKETPVKDEPVQDKKRERSP
EPSQETIKSDDTARQQGGRGGRGGRGGRGGRSQGNGRGGRGGRQRVTAVRPPPRQRSPPR
QRSPPRQRSPPRQRSPPRQPQSQHNRREPAGGRGGQRYSNPRQQGGQQQQYQRQGGRGQQ
QNAPAPPARQQQNLGKRRRDDGPDAGSQQAPADRGRPRARGNQGQRFSRPQHRNNRR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcggtatggcggtgggaaggaggtggtggaggcgacggatcgggacgggacgagcgga
cgcgcggcgttggcgcggttgttcgaacacgcgttgacgctcgttgaagcgagcgagagc
gcggtgagcggagggatgattttcacgacgattgagatcgtgctcgaggcgtgcacgatc
gcggaggcggaggacgtgctgctgtggtgcgatgagaataagacgcgcctgcgagagacg
acgatttggaaaaagggcaaactgccgacgcttcgaatgttgatcgcgctcgcgaagcgg
tgcgtggggcgaagctcggacgaggcacgggtgaaagggcgggcgttggttttgataagc
tggttcatgggtctgagcgatcgatcggggatgaataagaatggcgatagtaatccggag
acgacggctatttttgagcaagaggagtggttgcgggaagagctcgaggacggcgtcggg
gtggatgcggacgcgaagattaagatggaggtcgacagcggcgaaggtgatgtagcagca
gacgacgacgacaacgagtttggcgtagacgacgcgtttcatcgcacgttttggtcgctc
cagcagtattttcaagacccgccgacgacgatgtccaaaaatggcgcgtggaatagcttt
cacgccatcttgtgcgtggttctggacaagttcgaggcgttccctctgggtgagacggcg
ggaacgattgacgaggagccagaatcggaaaagcgaaaaatgattgggcatcgctttctc
accgcgagacgcctgctgcctttgcagatgcaggatttcgtgtttcgtcgtcaaatttta
attcaggcggtcttcttcttacagtatatggataacgaaaagtttaaggagcacgtcgtg
gacgacgaagtcacggaattgtccgagcgagtgatgaagatcttgaaacgcaccggaccg
aacgccgtcgccgacgctggcatcatcgagaacgccttggaagacgagttgagttggcgc
aagtggaaagagcaaggttgcccgagctttgagaagcaaccgatcgatttcgagaccgaa
ccgatgcctgataattgggacaaaaagtattcgaactggccgcccgatcagtatccaccc
gatgatccaaatctgaaacacgatttcgatcacccagagctcaaccgattgtggaattta
ggcgaagacgatccgaatgggacgtctgtggacgccttgaaagaggtgagcgtggaggag
ttcttgaaaccgtgcctggaagagatggatccttcgcaacaagttgaagctgaatacaga
agagtcaatgacccgacgtttagatggaaagccatgcgcatgctctcaaagaaccacttg
cacttgttcccaaaaatcgccgcggagggattggagagcgtcgttccagatattttggga
gtcccagaccctcggccgccgaaagaaaagagtgaagaagagctggcaaaggaatcaaaa
cccgcggaggaaggtaatgtcggcactggcggcaagcataaccttctcggttctcacgac
gaggtgctcgacggcgcgctggagccaatcgaaggtgacgtcgacatggaagaggaagag
aagcaacctccggtagtcgagaaagctacagacgaagcgaaagttgaagataagccgaaa
ttcacgccaccaccaccgcgtcatacagtgccgaaggatgctccggccacggaatcggcc
gccaaggaaacgccagttaaagacgaacccgttcaggacaagaagagagagcggtcaccg
gaaccgagccaggagacgataaaatcagacgatacggcgcgccaacaaggcggtcgaggt
ggtcgaggcggtcgaggtggccgaggtggtcgaagtcaaggcaatgggcgcggaggaaga
ggcggaagacagcgagtgactgcggtgcgaccgccgccacgccaacgttcgccgccgcgt
caacgttcgccgccgcgtcaacgttcgccgccgcgtcaacgttcgccgccgcgacagccg
cagtcgcagcataatcgtcgcgagcctgccggcggacgcggtgggcagcgatactccaat
cctcgccaacagggcggacaacagcaacagtatcagcgacaaggcggtcgtgggcagcag
caaaacgcgcccgctcctcctgcacgtcagcagcaaaatctcggtaaacgccgacgagac
gatggtccagatgctggttcgcaacaagcgccggcggaccgaggcagaccccgtgcgcgt
ggaaatcaaggtcagagattctctcgaccgcaacatagaaataataggcgatag
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