Ostreococcus lucimarinus: OSTLU_15396
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Entry
OSTLU_15396 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14317
nuclear pore complex protein Nup214
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_15396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_15396
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OSTLU_15396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
5001922
NCBI-ProteinID:
XP_001417737
JGI:
15396
UniProt:
A4RXE9
LinkDB
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Position
5:320102..325513
Genome browser
AA seq
1803 aa
AA seq
DB search
MARARRGDDGEPRVGALVFATVGSARVGADDDEIARAGHANALAVSGKYGYLVHARGTTA
RVLRTSEVAREVEGWRAREAPASERRLDGDCVDACARSDGGDVIEIVSMTPDERAFATCD
RRGRVEFYAAKDSSDGKARGEKFGEMTLEAPVRAVKWCANSASFIALTGDALMYVEAVGK
EPKEIATNVTCVSARANGTLAWASGNVISIASSVDPAQTVKETIEISPFHDPEDSVEIDG
VYVHSADKILFTSRSVEDPADCSLAVLKKVDGNWVCTRLESAFDIDSEVVDLTGPVLDAS
AFSPWNVVFATHRKAWDNQLLTLQITRDADPCVLEVEDDRCSASVPMTEDDENNYVTGLG
LDLTGAGGTMLNPQDKSAPELAKGPAIVFSTTDGRITILKCANLDTEEARIGAQSIQTQL
TLPTDSPPAMIQAGSSPTLTPAKPSFGFGSAPPATPTLAFTASSPAATAASTPAFSFKPT
ETSATPVASTPTFSFKPPEATATPPPASTPAFSFKPAEAASTPAFSFKPAEAASTPAFSF
KPAEAASTPAFSFKPAEAASTPPPASTSAFSFKPPEPAKTPLASSTPAFSFKSPEPLAFP
TASPASAPAFSFKSPEPAKPPVSPTPVVSQPTSSPKPIETVKPIESVSLQSVAPTPPRTT
PPPKPATQSAAAPQSPVEKGMELLKRLSIGEIDVDTAQLELKGLILDSTPTKSTKKDWSV
SMAKFTPIDTTRSPGVNLQSSPLPSWGKKLEDIRRSKEQASSEADGLKAIEDDMASVIAE
VGAMLEDVTSVTKSLSGEISDGLMPGKADIAKIEQSSASAKTTIESLLDGSNQLRSRLNE
LWAANASDETLRSELESLISAACEEIDENSNVDDTRELSPALKDVQDNMHKDMRTVLEMA
ADLEASVERLEAAKREANRPKPKTIIRSGLIASKVDTSASFTAQMNGIVKAINTQAAVIE
AQAEKLDTLLARVQEEDAPRVSKIKSTLPKENTPPIPAKPLNVTAKKAVEPERSAEPLML
KTPVSKIVVADEGLGDDLETVIMSRIASTRITTVKKTTPPKPKQISPIKPAAIEKKPAPL
AASQPELAKPSAPAMSFGADFLAKSQQDYAAAQKALDEDLKKATTPTESKPAFSFAATPA
TKPAETESKPAFTFAPPAAKPSPSTESKSAFTFAPPSASSSATESKSASAAAPTMSFSAD
FLAKANSGYQKAQTALEEELKGEKVEEKKSEAKFSFGIPASAPTSTSTSAATPVSGGFGS
SAPASKPAGGFSFGTPAKATADSKSELASAPAFSFGAKPAEIKPAGDVKSKEVPEEESKK
EESKEATTPVAAPPMSFSADFLAKANKGYAAAQAALEDDLAKATPPPGTPPASAASASPE
KPLSFTAATPSPAPKFGITAASSSASLATEVAPSKPTFGSSASSAATTTTGISSGFGSFG
FGSSTNSASSGGAGAFGSTSPAAAAASAPVFGASTSTSSQSAPAFGASSAFGAATTSSFG
AAPATSAPAFGAAPATSGGFGKSSGFGAAATTSAPAFGAPSAFGAATTTSSPAFGAPSAF
GAATTTSTPAFGAPSAFGAATTTSAPAFGAPSAFGAAAAASTPTAFGAAATGASGFAAVA
SSPSPFGAAATASGGFGAAATQATTGFGAAAAQNSNGFGGFGQSTGGFGAAATQATTGFG
AAATQATTGFGAAATQATTGFGAAAAQSSSGFGGGFGQPTASSGFGQPAASSGFGQPAAS
SGFGQPASPGFGAAAQTSAFGGGFGQPASAGGFGQPSSPSGFGQPQQQSGFGAQNPAFTQ
MRR
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcgcgacgcggcgacgacggcgagccgcgcgtcggcgcgctcgtgttcgcg
acggtcgggagcgcgcgcgtcggcgcggacgacgatgagatcgcgcgcgcgggacacgcg
aacgcgctggcggtgagcggaaagtacggatacctggtgcacgcgcgcggaacgacggcg
cgcgtgctcaggacgagcgaggtggcgcgcgaggttgagggttggcgcgcgagagaggcg
ccggcgagcgaacggcgactcgatggtgattgcgtcgacgcgtgcgcgcgatcggacggt
ggagacgtgattgaaatcgtcagcatgacgccggatgaacgcgcgttcgcgacgtgcgat
cggcgcgggcgcgtggagttttacgcggcgaaggattcgagcgacggtaaggcgagaggg
gaaaagtttggagagatgacgctcgaggcgccggtgcgggcggtgaagtggtgcgcgaat
agcgcgtcgtttatcgctttgacgggagatgcgttgatgtacgttgaggcggtggggaag
gagccgaaggagattgcgacgaacgtgacgtgcgtgagcgcgcgagcgaacgggacgctg
gcgtgggcgagcggtaacgttatttcaatcgcgtcgagcgttgatcccgcgcaaacggtg
aaggaaacgatcgaaatcagtccatttcacgatcccgaggattcggtggaaattgacggg
gtgtacgtgcacagcgctgacaagattttgttcacctcgagaagcgtcgaagatcccgcc
gactgctccttggccgtgctcaagaaggtcgatgggaactgggtgtgcacgcgcctcgaa
tccgcattcgacatcgattccgaagttgttgatttgactggtccagtacttgatgcgagc
gcgttcagtccgtggaatgtggtgttcgcgacgcatcgaaaagcttgggacaaccagctg
ttgactcttcaaataacgcgcgacgcggatccttgcgtgctcgaagtcgaagacgacaga
tgcagcgcttcggtgccgatgactgaggacgacgaaaacaactacgtcacgggcttagga
ttagacttgactggcgcgggtggaaccatgctcaacccgcaggataaaagcgcgcccgag
ttggcgaaaggaccagcgattgttttcagcaccacagatggaagaattacgattctgaaa
tgtgcgaacttggacaccgaggaagcgcgaatcggagcgcagtcgatacagacgcagctg
acgctaccgacggattcgccgccggcgatgattcaagcagggtcgtctccaacgctcaca
cctgcaaagccttctttcggcttcggttcggcgccaccggcgactccaacgttggctttc
acggccagttcgcctgccgctacggcggcgagcacgccggcgtttagctttaagcccact
gaaacgtccgcgacaccggtggcttcgacaccaacctttagtttcaagccgccggaagcg
actgcaacgcctcctccagcgtccacacctgcgttcagctttaagcccgccgaggcggca
tcgacgccggcgttcagctttaagcccgctgaggcggcatcgacgccggcgttcagcttt
aagcccgctgaggcggcatcgacgccggcgttcagctttaagcccgctgaggcggcatcg
acgccacccccagcttcgacgtcggcgttcagctttaagccgccagaaccagcgaagacg
ccacttgcgtcgtcaacgccagcgttcagcttcaagtcgcccgaacctttggcttttccg
accgcgtctcctgcgtccgcgccggcgttcagctttaagtcgcccgagccagccaaacca
ccggtgtctccgacgccagtggtgtctcagccgacgtcttctcccaagcctatcgaaacg
gtaaaaccaatcgagagcgtgagtttacagtctgtcgctccgacgccaccgcgaacgaca
ccaccgccgaaaccggcgacgcagtccgcggccgcaccgcaatcgccagtcgagaaaggc
atggaacttctcaagcggttgagcatcggggaaatcgacgtagacacggcacagctcgag
cttaaaggattgattttggatagcacaccgacaaagagcacaaaaaaagactggagcgta
tctatggctaagtttacgccgatcgataccacgcgttcacctggcgtaaacttgcaaagc
tctccgcttccttcctggggcaagaaattagaagacattaggcgatcgaaggagcaagcg
agctcggaggcggacggccttaaggcgatagaagacgatatggcttctgtgatcgccgaa
gtaggtgccatgcttgaggatgtcacgagcgtgacaaaatctttaagcggcgaaatcagt
gatggtttgatgccaggaaaagcagacattgccaagattgaacagtcgtcggcgtctgcg
aagacgaccatcgaatcgttgttggacgggagcaatcagttgcgcagtcgactcaatgag
ttgtgggccgcaaacgcttcggacgaaacattgcgaagcgagctagagagcttgatttcg
gcggcgtgtgaagaaatcgatgagaactcaaacgtcgacgatacgcgggaactcagtcct
gcattgaaggatgtccaggacaacatgcacaaagacatgcgtacggtgctagagatggcg
gcggatctcgaggcctcagttgaaagactagaagccgccaagagagaagccaatcgccct
aagccgaaaacaattattcgtagtggattgatagcatcaaaggtagacacctccgcgagt
ttcaccgcgcagatgaacggcattgtgaaagccattaacacgcaagccgcggtgattgag
gcgcaagctgaaaagttggatacacttctggcgcgcgttcaagaagaggacgcgccgcgc
gtatcgaagattaagagcacattaccaaaggaaaacacgccgccgataccggcgaaaccg
ctgaacgtaaccgcgaagaaagctgttgagcccgagcgctcagcggaacccttgatgctc
aaaactcccgtgagtaagatagtggttgcggatgagggtttgggggacgacttggaaact
gtcatcatgtcgagaatcgcgtcgacaagaatcacgacggtgaagaaaacgactccacct
aaaccgaagcaaatttcgccgatcaaacctgctgcgattgaaaagaaaccagcaccccta
gcggcgtcgcaaccggagttagcaaaaccgtcggcaccggcgatgagctttggcgccgat
ttcttggccaaatctcaacaagattacgccgcggctcaaaaggcgttggatgaagatttg
aagaaagcaacgacaccgacggagtcgaaaccggcattcagtttcgccgcaacgcccgca
acgaagccagccgagaccgagtcaaagccggcgttcacgttcgctccgccggcggcgaaa
ccgtcaccgtctaccgagtctaaatctgcattcacgtttgctcctccatcagcaagctcg
agcgcaacggaatcgaagtcggcgagtgcggcagcgccgacgatgagtttcagcgctgac
tttctcgccaaggcgaacagtgggtatcagaaagcccaaactgcgcttgaagaagagctc
aagggtgaaaaagtggaggagaagaagtcagaggcaaagtttagtttcggtatccctgcg
agcgcacccacgtcgacttcgacgtctgcagcgacaccggtaagcggtggatttggttcg
agtgctcccgcgtcgaagcccgctggtggattttctttcggtacaccggcgaaggccacg
gcagattcaaagtctgaactcgcgagtgcgcccgcgtttagctttggtgcgaagccagcc
gaaataaaaccggccggcgacgttaaatcaaaggaagtaccagaagaagaatcaaagaag
gaagaatcaaaggaggcaactacgcccgttgcggcgccacccatgagtttcagtgcggac
tttttggccaaggcaaacaaagggtatgctgcggcgcaagcggcgctagaggacgacctt
gcaaaggcgacacccccgcctggtacgccgccagcgagcgcggcgagtgcgtcgccagag
aagccgcttagctttactgccgcgacgccgtcgccagcacccaaattcggaattaccgca
gcgtcgagctcggcgagcttagccacggaagtcgcgccttcgaaacctacatttgggtcg
tctgcgagttcagccgcgactacaacgactggtatatcatctggctttgggagtttcggt
ttcggcagttctacgaattctgcttcaagtggcggagcaggcgcgtttgggtctaccagt
ccagccgcagccgcggcgtccgcaccagtgttcggtgcttcgacctctacaagctcgcaa
agtgcgcccgcattcggtgcttccagtgcattcggtgctgcaaccacgtcgagcttcggt
gcagcgccggcgacgagcgcgccggcgtttggagcagcgccggcgacgtcgggcggtttt
ggtaaatcttctggtttcggtgctgcggcaacgacgagtgcacccgcatttggggcacct
tcggcatttggtgccgcgacaacgacaagttcacctgcattcggagcaccttcagcgttc
ggtgccgcgacaacgacgagcacgcctgcgtttggcgcaccctctgcgttcggtgccgcg
acaacgactagcgccccggctttcggtgcgccttctgcctttggtgctgcggcggcggct
tccacgccaacagcattcggagctgcagccacaggagcgagtggctttgcggcggtggcg
agcagcccatctcccttcggcgccgcggcaaccgcgagtgggggattcggcgccgccgcg
acgcaagcgacgactggcttcggtgcggcggcggcgcaaaactccaacggattcggtggt
ttcggtcaatctacgggaggtttcggtgcggcggcgacgcaagcgacgactggtttcggt
gcggcggcgacgcaagcgacgactggtttcggtgcggcggcgacgcaagcgacgactggt
ttcggtgcggcggcggcacaaagctcgagtggctttggcggtgggttcggccagcccacg
gcgtcgagtggctttggccagcccgcggcgtcgagtggctttggccagcccgcggcgtcg
agtggctttggccagccagcgtctcccggcttcggcgcggccgctcaaacttccgccttc
ggcggcggatttggtcaacctgcatcggccggcggtttcggccagccatcatctccgagc
gggttcggacaaccgcaacaacaatccggtttcggcgctcaaaatccagcgttcactcaa
atgcgacgttaa
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integrated database retrieval system