KEGG   Ostreococcus lucimarinus: OSTLU_15396
Entry
OSTLU_15396       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K14317  nuclear pore complex protein Nup214
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    OSTLU_15396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_15396
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     OSTLU_15396
SSDB
Other DBs
NCBI-GeneID: 5001922
NCBI-ProteinID: XP_001417737
JGI: 15396
UniProt: A4RXE9
LinkDB
Position
5:320102..325513
AA seq 1803 aa
MARARRGDDGEPRVGALVFATVGSARVGADDDEIARAGHANALAVSGKYGYLVHARGTTA
RVLRTSEVAREVEGWRAREAPASERRLDGDCVDACARSDGGDVIEIVSMTPDERAFATCD
RRGRVEFYAAKDSSDGKARGEKFGEMTLEAPVRAVKWCANSASFIALTGDALMYVEAVGK
EPKEIATNVTCVSARANGTLAWASGNVISIASSVDPAQTVKETIEISPFHDPEDSVEIDG
VYVHSADKILFTSRSVEDPADCSLAVLKKVDGNWVCTRLESAFDIDSEVVDLTGPVLDAS
AFSPWNVVFATHRKAWDNQLLTLQITRDADPCVLEVEDDRCSASVPMTEDDENNYVTGLG
LDLTGAGGTMLNPQDKSAPELAKGPAIVFSTTDGRITILKCANLDTEEARIGAQSIQTQL
TLPTDSPPAMIQAGSSPTLTPAKPSFGFGSAPPATPTLAFTASSPAATAASTPAFSFKPT
ETSATPVASTPTFSFKPPEATATPPPASTPAFSFKPAEAASTPAFSFKPAEAASTPAFSF
KPAEAASTPAFSFKPAEAASTPPPASTSAFSFKPPEPAKTPLASSTPAFSFKSPEPLAFP
TASPASAPAFSFKSPEPAKPPVSPTPVVSQPTSSPKPIETVKPIESVSLQSVAPTPPRTT
PPPKPATQSAAAPQSPVEKGMELLKRLSIGEIDVDTAQLELKGLILDSTPTKSTKKDWSV
SMAKFTPIDTTRSPGVNLQSSPLPSWGKKLEDIRRSKEQASSEADGLKAIEDDMASVIAE
VGAMLEDVTSVTKSLSGEISDGLMPGKADIAKIEQSSASAKTTIESLLDGSNQLRSRLNE
LWAANASDETLRSELESLISAACEEIDENSNVDDTRELSPALKDVQDNMHKDMRTVLEMA
ADLEASVERLEAAKREANRPKPKTIIRSGLIASKVDTSASFTAQMNGIVKAINTQAAVIE
AQAEKLDTLLARVQEEDAPRVSKIKSTLPKENTPPIPAKPLNVTAKKAVEPERSAEPLML
KTPVSKIVVADEGLGDDLETVIMSRIASTRITTVKKTTPPKPKQISPIKPAAIEKKPAPL
AASQPELAKPSAPAMSFGADFLAKSQQDYAAAQKALDEDLKKATTPTESKPAFSFAATPA
TKPAETESKPAFTFAPPAAKPSPSTESKSAFTFAPPSASSSATESKSASAAAPTMSFSAD
FLAKANSGYQKAQTALEEELKGEKVEEKKSEAKFSFGIPASAPTSTSTSAATPVSGGFGS
SAPASKPAGGFSFGTPAKATADSKSELASAPAFSFGAKPAEIKPAGDVKSKEVPEEESKK
EESKEATTPVAAPPMSFSADFLAKANKGYAAAQAALEDDLAKATPPPGTPPASAASASPE
KPLSFTAATPSPAPKFGITAASSSASLATEVAPSKPTFGSSASSAATTTTGISSGFGSFG
FGSSTNSASSGGAGAFGSTSPAAAAASAPVFGASTSTSSQSAPAFGASSAFGAATTSSFG
AAPATSAPAFGAAPATSGGFGKSSGFGAAATTSAPAFGAPSAFGAATTTSSPAFGAPSAF
GAATTTSTPAFGAPSAFGAATTTSAPAFGAPSAFGAAAAASTPTAFGAAATGASGFAAVA
SSPSPFGAAATASGGFGAAATQATTGFGAAAAQNSNGFGGFGQSTGGFGAAATQATTGFG
AAATQATTGFGAAATQATTGFGAAAAQSSSGFGGGFGQPTASSGFGQPAASSGFGQPAAS
SGFGQPASPGFGAAAQTSAFGGGFGQPASAGGFGQPSSPSGFGQPQQQSGFGAQNPAFTQ
MRR
NT seq 5412 nt   +upstreamnt  +downstreamnt
atggcgcgcgcgcgacgcggcgacgacggcgagccgcgcgtcggcgcgctcgtgttcgcg
acggtcgggagcgcgcgcgtcggcgcggacgacgatgagatcgcgcgcgcgggacacgcg
aacgcgctggcggtgagcggaaagtacggatacctggtgcacgcgcgcggaacgacggcg
cgcgtgctcaggacgagcgaggtggcgcgcgaggttgagggttggcgcgcgagagaggcg
ccggcgagcgaacggcgactcgatggtgattgcgtcgacgcgtgcgcgcgatcggacggt
ggagacgtgattgaaatcgtcagcatgacgccggatgaacgcgcgttcgcgacgtgcgat
cggcgcgggcgcgtggagttttacgcggcgaaggattcgagcgacggtaaggcgagaggg
gaaaagtttggagagatgacgctcgaggcgccggtgcgggcggtgaagtggtgcgcgaat
agcgcgtcgtttatcgctttgacgggagatgcgttgatgtacgttgaggcggtggggaag
gagccgaaggagattgcgacgaacgtgacgtgcgtgagcgcgcgagcgaacgggacgctg
gcgtgggcgagcggtaacgttatttcaatcgcgtcgagcgttgatcccgcgcaaacggtg
aaggaaacgatcgaaatcagtccatttcacgatcccgaggattcggtggaaattgacggg
gtgtacgtgcacagcgctgacaagattttgttcacctcgagaagcgtcgaagatcccgcc
gactgctccttggccgtgctcaagaaggtcgatgggaactgggtgtgcacgcgcctcgaa
tccgcattcgacatcgattccgaagttgttgatttgactggtccagtacttgatgcgagc
gcgttcagtccgtggaatgtggtgttcgcgacgcatcgaaaagcttgggacaaccagctg
ttgactcttcaaataacgcgcgacgcggatccttgcgtgctcgaagtcgaagacgacaga
tgcagcgcttcggtgccgatgactgaggacgacgaaaacaactacgtcacgggcttagga
ttagacttgactggcgcgggtggaaccatgctcaacccgcaggataaaagcgcgcccgag
ttggcgaaaggaccagcgattgttttcagcaccacagatggaagaattacgattctgaaa
tgtgcgaacttggacaccgaggaagcgcgaatcggagcgcagtcgatacagacgcagctg
acgctaccgacggattcgccgccggcgatgattcaagcagggtcgtctccaacgctcaca
cctgcaaagccttctttcggcttcggttcggcgccaccggcgactccaacgttggctttc
acggccagttcgcctgccgctacggcggcgagcacgccggcgtttagctttaagcccact
gaaacgtccgcgacaccggtggcttcgacaccaacctttagtttcaagccgccggaagcg
actgcaacgcctcctccagcgtccacacctgcgttcagctttaagcccgccgaggcggca
tcgacgccggcgttcagctttaagcccgctgaggcggcatcgacgccggcgttcagcttt
aagcccgctgaggcggcatcgacgccggcgttcagctttaagcccgctgaggcggcatcg
acgccacccccagcttcgacgtcggcgttcagctttaagccgccagaaccagcgaagacg
ccacttgcgtcgtcaacgccagcgttcagcttcaagtcgcccgaacctttggcttttccg
accgcgtctcctgcgtccgcgccggcgttcagctttaagtcgcccgagccagccaaacca
ccggtgtctccgacgccagtggtgtctcagccgacgtcttctcccaagcctatcgaaacg
gtaaaaccaatcgagagcgtgagtttacagtctgtcgctccgacgccaccgcgaacgaca
ccaccgccgaaaccggcgacgcagtccgcggccgcaccgcaatcgccagtcgagaaaggc
atggaacttctcaagcggttgagcatcggggaaatcgacgtagacacggcacagctcgag
cttaaaggattgattttggatagcacaccgacaaagagcacaaaaaaagactggagcgta
tctatggctaagtttacgccgatcgataccacgcgttcacctggcgtaaacttgcaaagc
tctccgcttccttcctggggcaagaaattagaagacattaggcgatcgaaggagcaagcg
agctcggaggcggacggccttaaggcgatagaagacgatatggcttctgtgatcgccgaa
gtaggtgccatgcttgaggatgtcacgagcgtgacaaaatctttaagcggcgaaatcagt
gatggtttgatgccaggaaaagcagacattgccaagattgaacagtcgtcggcgtctgcg
aagacgaccatcgaatcgttgttggacgggagcaatcagttgcgcagtcgactcaatgag
ttgtgggccgcaaacgcttcggacgaaacattgcgaagcgagctagagagcttgatttcg
gcggcgtgtgaagaaatcgatgagaactcaaacgtcgacgatacgcgggaactcagtcct
gcattgaaggatgtccaggacaacatgcacaaagacatgcgtacggtgctagagatggcg
gcggatctcgaggcctcagttgaaagactagaagccgccaagagagaagccaatcgccct
aagccgaaaacaattattcgtagtggattgatagcatcaaaggtagacacctccgcgagt
ttcaccgcgcagatgaacggcattgtgaaagccattaacacgcaagccgcggtgattgag
gcgcaagctgaaaagttggatacacttctggcgcgcgttcaagaagaggacgcgccgcgc
gtatcgaagattaagagcacattaccaaaggaaaacacgccgccgataccggcgaaaccg
ctgaacgtaaccgcgaagaaagctgttgagcccgagcgctcagcggaacccttgatgctc
aaaactcccgtgagtaagatagtggttgcggatgagggtttgggggacgacttggaaact
gtcatcatgtcgagaatcgcgtcgacaagaatcacgacggtgaagaaaacgactccacct
aaaccgaagcaaatttcgccgatcaaacctgctgcgattgaaaagaaaccagcaccccta
gcggcgtcgcaaccggagttagcaaaaccgtcggcaccggcgatgagctttggcgccgat
ttcttggccaaatctcaacaagattacgccgcggctcaaaaggcgttggatgaagatttg
aagaaagcaacgacaccgacggagtcgaaaccggcattcagtttcgccgcaacgcccgca
acgaagccagccgagaccgagtcaaagccggcgttcacgttcgctccgccggcggcgaaa
ccgtcaccgtctaccgagtctaaatctgcattcacgtttgctcctccatcagcaagctcg
agcgcaacggaatcgaagtcggcgagtgcggcagcgccgacgatgagtttcagcgctgac
tttctcgccaaggcgaacagtgggtatcagaaagcccaaactgcgcttgaagaagagctc
aagggtgaaaaagtggaggagaagaagtcagaggcaaagtttagtttcggtatccctgcg
agcgcacccacgtcgacttcgacgtctgcagcgacaccggtaagcggtggatttggttcg
agtgctcccgcgtcgaagcccgctggtggattttctttcggtacaccggcgaaggccacg
gcagattcaaagtctgaactcgcgagtgcgcccgcgtttagctttggtgcgaagccagcc
gaaataaaaccggccggcgacgttaaatcaaaggaagtaccagaagaagaatcaaagaag
gaagaatcaaaggaggcaactacgcccgttgcggcgccacccatgagtttcagtgcggac
tttttggccaaggcaaacaaagggtatgctgcggcgcaagcggcgctagaggacgacctt
gcaaaggcgacacccccgcctggtacgccgccagcgagcgcggcgagtgcgtcgccagag
aagccgcttagctttactgccgcgacgccgtcgccagcacccaaattcggaattaccgca
gcgtcgagctcggcgagcttagccacggaagtcgcgccttcgaaacctacatttgggtcg
tctgcgagttcagccgcgactacaacgactggtatatcatctggctttgggagtttcggt
ttcggcagttctacgaattctgcttcaagtggcggagcaggcgcgtttgggtctaccagt
ccagccgcagccgcggcgtccgcaccagtgttcggtgcttcgacctctacaagctcgcaa
agtgcgcccgcattcggtgcttccagtgcattcggtgctgcaaccacgtcgagcttcggt
gcagcgccggcgacgagcgcgccggcgtttggagcagcgccggcgacgtcgggcggtttt
ggtaaatcttctggtttcggtgctgcggcaacgacgagtgcacccgcatttggggcacct
tcggcatttggtgccgcgacaacgacaagttcacctgcattcggagcaccttcagcgttc
ggtgccgcgacaacgacgagcacgcctgcgtttggcgcaccctctgcgttcggtgccgcg
acaacgactagcgccccggctttcggtgcgccttctgcctttggtgctgcggcggcggct
tccacgccaacagcattcggagctgcagccacaggagcgagtggctttgcggcggtggcg
agcagcccatctcccttcggcgccgcggcaaccgcgagtgggggattcggcgccgccgcg
acgcaagcgacgactggcttcggtgcggcggcggcgcaaaactccaacggattcggtggt
ttcggtcaatctacgggaggtttcggtgcggcggcgacgcaagcgacgactggtttcggt
gcggcggcgacgcaagcgacgactggtttcggtgcggcggcgacgcaagcgacgactggt
ttcggtgcggcggcggcacaaagctcgagtggctttggcggtgggttcggccagcccacg
gcgtcgagtggctttggccagcccgcggcgtcgagtggctttggccagcccgcggcgtcg
agtggctttggccagccagcgtctcccggcttcggcgcggccgctcaaacttccgccttc
ggcggcggatttggtcaacctgcatcggccggcggtttcggccagccatcatctccgagc
gggttcggacaaccgcaacaacaatccggtttcggcgctcaaaatccagcgttcactcaa
atgcgacgttaa

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