Ostreococcus lucimarinus: OSTLU_17027
Help
Entry
OSTLU_17027 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12816
pre-mRNA-processing factor 17
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_17027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_17027
Spliceosome [BR:
olu03041
]
Complex C
Other components
Step II factors
OSTLU_17027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
5004264
NCBI-ProteinID:
XP_001419932
JGI:
17027
UniProt:
A4S3K0
LinkDB
All DBs
Position
10:join(197270..197644,197675..198802)
Genome browser
AA seq
500 aa
AA seq
DB search
MRVNLTYDEMTAPIEGPRHETREDRLTGRGARNHALGQVDATTVNAFSFDEQYNTYNSRG
YAAAPSGTGVVGDADAMRASKGETAFNISAAKKRRIREEVLAGVATPASGETDTSAWAPA
RAAQKEKEYVKWHMDNREAKLRAKGKLEGLETGPGEDGGAQDDSKFTKFHGSEEVNYAGD
SWIAAPKSEKRDGDGTCFAPNKCVHTFNGHTKGVSKIEFFPHTGHLLLSAGMDNVVKIWD
VYNSRKCMRTYMGHDKAVKDVCFNGDGTRFVSTSWDKKVRLWDTETGKIIQTVTSGKIGY
CAKIHPKQDNLVLIGQSDKKIVQWDMNNGDLVQEYDQHLGPVNSITFADGGERFMSSSDD
KTLRVWEFGIPVTTKYIADPSMHSVPATAISNNGKYIIGQSLDNQIITFSVDERFRRNNK
KRFGGHHNAGYACQPAFSTDDSTVVSGDGSGKIFFWDWKTSKIIKSVKAHAEVCIGVAWH
PLKSSVVASCSWDKTIKLWK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgaacctgacgtacgacgagatgacggccccgatcgagggaccgaggcacgag
acgcgagaggatagactcacggggcgaggggcgaggaatcacgcgctcgggcaggtggac
gcgacgacggtgaacgcgtttagtttcgacgaacagtacaatacgtacaattcgcggggg
tacgcggcggcgccgtcggggactggggtcgtcggtgacgccgacgcgatgcgagcgagc
aagggggagacggcgtttaatatttctgcggcgaaaaaacgaaggattcgcgaggaagtg
ctcgcgggggtggcgacgccggcgagcggcgagacggatacgtcggcgtgggcgccggct
cgagcggcgcaaaaggagaaggagtacgtgaaatggcacatggataatcgcgaggcaaag
cttcgggcgaaaggaaagttggaaggtttggagacgggtccgggcgaggacggcggcgct
caagacgactcaaagtttacaaagtttcacggctcggaggaagtcaactacgcgggggat
tcttggattgcggcgccaaagagcgagaagcgcgatggagatggaacttgcttcgcgccg
aacaagtgcgtgcacacgtttaacggtcacacgaagggtgtgtcaaagattgaatttttc
cctcacaccggtcacctgttgctctcggcgggcatggacaacgtggtcaagatttgggac
gtgtacaacagtcgaaagtgcatgcgcacgtacatgggacacgacaaggcggtaaaagac
gtgtgcttcaacggcgatggcacgcgcttcgtgtcgacgtcgtgggataaaaaggttcga
ttgtgggacacggagactggcaaaataatccaaaccgtgacgagcgggaaaatcggttac
tgcgcgaagattcatccaaagcaagacaacttggtgttgatcgggcagagcgataaaaaa
atcgtgcagtgggacatgaacaacggggacttggtgcaagagtacgaccagcatctcggg
ccggtgaactcgatcactttcgccgacggcggcgaacgcttcatgtcctcttcggacgac
aaaacgcttcgagtttgggagtttggaatcccggtgacgactaaatacatcgctgacccg
tcgatgcactccgtgcccgcgactgcgatatcgaacaacggcaagtacatcatcggtcaa
tcgctcgacaatcaaattatcacctttagcgtcgacgaacgctttcgaagaaacaacaag
aaacgctttggtggtcaccacaacgccggttacgcgtgccagcccgcgttttctaccgat
gacagcaccgtcgttagcggcgacgggtctggtaagatcttcttctgggattggaagacg
tccaaaatcatcaaatccgtcaaggcgcacgccgaggtgtgcatcggcgtcgcttggcac
ccgctcaagagctccgtcgtcgcgtcgtgcagttgggacaagacgatcaagctgtggaag
tag
DBGET
integrated database retrieval system
