KEGG   Ostreococcus lucimarinus: OSTLU_17027
Entry
OSTLU_17027       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OSTLU_17027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:olu03041]
    OSTLU_17027
Spliceosome [BR:olu03041]
 Complex C
  Other components
   Step II factors
    OSTLU_17027
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz EIF3I WD40_WDHD1_1st WDR55 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_Aladin CFAP251_N Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_VPS8 DSE1_N Beta-prop_DCAF4 PAC11 Beta-prop_SCAP TRM82_WD Beta-prop_ACSF4 Beta-prop_NWD2_C NBCH_WD40 WDR90_beta-prop_4th WD_LRWD1 Beta-prop_DCAF12 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 5004264
NCBI-ProteinID: XP_001419932
JGI: 17027
UniProt: A4S3K0
LinkDB
Position
10:join(197270..197644,197675..198802)
AA seq 500 aa
MRVNLTYDEMTAPIEGPRHETREDRLTGRGARNHALGQVDATTVNAFSFDEQYNTYNSRG
YAAAPSGTGVVGDADAMRASKGETAFNISAAKKRRIREEVLAGVATPASGETDTSAWAPA
RAAQKEKEYVKWHMDNREAKLRAKGKLEGLETGPGEDGGAQDDSKFTKFHGSEEVNYAGD
SWIAAPKSEKRDGDGTCFAPNKCVHTFNGHTKGVSKIEFFPHTGHLLLSAGMDNVVKIWD
VYNSRKCMRTYMGHDKAVKDVCFNGDGTRFVSTSWDKKVRLWDTETGKIIQTVTSGKIGY
CAKIHPKQDNLVLIGQSDKKIVQWDMNNGDLVQEYDQHLGPVNSITFADGGERFMSSSDD
KTLRVWEFGIPVTTKYIADPSMHSVPATAISNNGKYIIGQSLDNQIITFSVDERFRRNNK
KRFGGHHNAGYACQPAFSTDDSTVVSGDGSGKIFFWDWKTSKIIKSVKAHAEVCIGVAWH
PLKSSVVASCSWDKTIKLWK
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgcgcgtgaacctgacgtacgacgagatgacggccccgatcgagggaccgaggcacgag
acgcgagaggatagactcacggggcgaggggcgaggaatcacgcgctcgggcaggtggac
gcgacgacggtgaacgcgtttagtttcgacgaacagtacaatacgtacaattcgcggggg
tacgcggcggcgccgtcggggactggggtcgtcggtgacgccgacgcgatgcgagcgagc
aagggggagacggcgtttaatatttctgcggcgaaaaaacgaaggattcgcgaggaagtg
ctcgcgggggtggcgacgccggcgagcggcgagacggatacgtcggcgtgggcgccggct
cgagcggcgcaaaaggagaaggagtacgtgaaatggcacatggataatcgcgaggcaaag
cttcgggcgaaaggaaagttggaaggtttggagacgggtccgggcgaggacggcggcgct
caagacgactcaaagtttacaaagtttcacggctcggaggaagtcaactacgcgggggat
tcttggattgcggcgccaaagagcgagaagcgcgatggagatggaacttgcttcgcgccg
aacaagtgcgtgcacacgtttaacggtcacacgaagggtgtgtcaaagattgaatttttc
cctcacaccggtcacctgttgctctcggcgggcatggacaacgtggtcaagatttgggac
gtgtacaacagtcgaaagtgcatgcgcacgtacatgggacacgacaaggcggtaaaagac
gtgtgcttcaacggcgatggcacgcgcttcgtgtcgacgtcgtgggataaaaaggttcga
ttgtgggacacggagactggcaaaataatccaaaccgtgacgagcgggaaaatcggttac
tgcgcgaagattcatccaaagcaagacaacttggtgttgatcgggcagagcgataaaaaa
atcgtgcagtgggacatgaacaacggggacttggtgcaagagtacgaccagcatctcggg
ccggtgaactcgatcactttcgccgacggcggcgaacgcttcatgtcctcttcggacgac
aaaacgcttcgagtttgggagtttggaatcccggtgacgactaaatacatcgctgacccg
tcgatgcactccgtgcccgcgactgcgatatcgaacaacggcaagtacatcatcggtcaa
tcgctcgacaatcaaattatcacctttagcgtcgacgaacgctttcgaagaaacaacaag
aaacgctttggtggtcaccacaacgccggttacgcgtgccagcccgcgttttctaccgat
gacagcaccgtcgttagcggcgacgggtctggtaagatcttcttctgggattggaagacg
tccaaaatcatcaaatccgtcaaggcgcacgccgaggtgtgcatcggcgtcgcttggcac
ccgctcaagagctccgtcgtcgcgtcgtgcagttgggacaagacgatcaagctgtggaag
tag

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