Ostreococcus lucimarinus: OSTLU_311
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Entry
OSTLU_311 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OSTLU_311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_311
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
OSTLU_311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
NBCH_WD40
ANAPC4_WD40
WDR54
Utp21
Motif
Other DBs
NCBI-GeneID:
5006718
NCBI-ProteinID:
XP_001422661
JGI:
311
UniProt:
A4SAT6
LinkDB
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Position
20:complement(<126871..>129369)
Genome browser
AA seq
833 aa
AA seq
DB search
VTCVARSPNGDVVACGASDGSIRLWSLSDLDCDVTFRGHKRDVTALRFSQDGSLLVSGGR
DADVVVWDVVAESGLTRLRGHRDQITDVVIIDGKMHKSAELFGRKVVSTSKDGYVKVWDL
GTRACTQTCTGFEGETWSLDVNPTQTRCVIGTWDDKLHVYDCDESRDGYDQESPLVRMGT
VTRAAKGRAMTVRFHQTGNYLGVQGAGRGLEIYRVRGDKEAMKKQKRRLKRKREKMEAKA
REAEELGDLDAAKEAREEHDEEGARSAGDELELASTVTTKTKMRGFAFATEAPKRTDVMC
KVAVLLDDNSVQEWEIIEEEEPEKLHAIENPGHRSDVRAVALSPDDETVLSCSSNGCKLW
NVADGACLRTVKGGYGLCASFAPGGRHAIIGTKQGAIELVDVNAGTQLTVPDEAHEGAVW
AFAMLPDDSGFVSASADKTVRFWEWTLEKGENGLRTLSFNHMRTLQMAEDVLSCQISPDG
KLLSVSLLDNTLKVFFVDSLKFNLSLYGHRLPALCHDISSDSQLLASAGADKNIRIWGLD
FGDCHRSIFAHQDSVMALKFVPKTHYLFSVGKDKLVKYWDADKFDPLLTLEAHHGPVWCL
AVSTRGNFVITGSGDRSIRMWERTDEPFFVDEEQEKRLESMLDEGIDDERVRPNTDLPAE
GEAGMAGRKTLETLTAADAIVEALELAEHETKRLAEHAADSAKSGGKLAPIQPNPLLLGQ
SPETYALNAIAKIRPSELEQAILCIPFDFAHEILNHLTTWLNAGQKVELTCKIAALVMRL
HANSFGRTPETRRTLVKLRPLLRARAKEARDLMGFNLAGLNVLDAFIRDNEEV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtgcgtcgcgaggtcgccgaacggcgacgtcgtcgcgtgcggggcgagcgacgga
agcatcagactctggtcgttgagtgatttagactgcgacgtgacttttagaggacataaa
cgcgacgtgaccgcgctacgattttcgcaggacgggagcttgctggtgtccggtgggcga
gacgccgacgttgtggtttgggacgtagtcgccgagagcgggctgacgcggttgcgagga
catcgcgatcaaatcacggacgtggtcatcatcgatgggaaaatgcacaagagcgctgag
ctattcgggcgaaaggtggtgtcgacgagtaaggatggctacgtgaaagtttgggatttg
gggacgagagcgtgcacgcagacgtgcacggggttcgagggcgagacgtggagtttagac
gtcaacccaacgcagacgcgatgcgtgatcggaacgtgggatgataagctacatgtgtat
gactgcgatgagtcaagagatgggtacgatcaagagtcgccgttggtgcgaatgggaacg
gtgacgcgcgccgcaaagggacgagcgatgacggtgcggtttcatcaaactgggaactat
ctaggcgtgcaaggcgcgggtcgcggcctcgaaatataccgcgtgcgcggcgataaagaa
gcgatgaagaaacaaaagcgccggttgaagcgcaaacgcgaaaagatggaagcgaaagcg
cgcgaagctgaggaactcggcgacttggatgcggcgaaggaagcccgagaggagcacgat
gaagagggcgcacgaagcgcgggggatgagctggaactcgcatcaacggtcacgaccaaa
actaaaatgcgcggcttcgcgttcgcgacggaagcgccgaagcggacggatgtgatgtgc
aaagttgccgtgttgctcgacgacaactcggtgcaagagtgggaaatcatcgaagaagaa
gagccagaaaaattacacgccatcgagaaccccgggcatcgctctgatgttcgtgccgta
gcactctcgccggatgatgaaaccgtgctttcgtgctcgagtaacggctgcaagctgtgg
aatgtcgccgacggcgcgtgtttgagaaccgttaagggtggatacgggttgtgtgcgtcg
ttcgccccgggcggtcggcacgccatcattggtaccaagcaaggcgcgatcgagctcgtt
gatgtgaacgcaggaacccagctcactgtacccgacgaggcgcacgaaggcgcggtgtgg
gcgttcgccatgcttcccgacgacagtggtttcgtctccgcttcggcggacaagacggtg
cgattctgggaatggacattagagaaaggcgaaaacggtttgcgcactcttagtttcaac
cacatgcgcacgttgcaaatggcggaagatgtgttgagctgccaaatcagtcccgatggg
aagctgctctcggtgtcgctccttgacaacacgctcaaggtcttcttcgtggacagcctg
aagttcaacctgtcgctgtatggccacagacttccggcgttgtgccacgacatatccagt
gattcgcagttgctcgcgtcggcaggcgcggacaagaacattcgtatctggggattggac
tttggcgattgtcacaggtcaatttttgcccatcaagactctgttatggcgttgaagttt
gtgccaaagacgcattacttgttctcggttggtaaggataaattagtgaaatattgggac
gccgacaaatttgatcctctgctcacgcttgaggcgcatcacggcccggtgtggtgcctg
gcggtgagcacgcgaggaaactttgtcatcaccggcagcggcgatcgctcaattcgcatg
tgggagcgcaccgatgagcccttcttcgttgacgaagaacaggaaaagcgattggaatct
atgctcgacgaaggcattgatgacgagcgagtgcgcccaaacaccgatcttcctgctgaa
ggcgaggctggcatggcgggtcgcaaaactttggagacgttgaccgccgccgacgccatc
gtcgaggcgctcgagctcgctgagcacgaaaccaagcgccttgccgaacacgctgcggac
agcgccaaatccggcggaaagctcgcaccgatacagccaaatcctttactgttagggcag
tcaccggaaacgtacgctctgaacgccatcgcaaagattcgcccgagcgaactcgagcaa
gccatcctgtgcatccccttcgatttcgcccacgaaatcctcaaccatctcacaacctgg
ctcaacgccggccaaaaagtcgaactgacgtgcaagatcgccgccctagtcatgcgatta
cacgccaactcgttcggacgcacgccagagacgagacgcaccctcgtgaagctcagaccg
ctccttcgcgcgcgcgccaaggaggcgcgcgatttgatgggcttcaatctcgccggtctc
aacgtcctcgacgctttcatacgcgacaacgaagaagtc
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