KEGG   Ostreococcus lucimarinus: OSTLU_41034
Entry
OSTLU_41034       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03022  Basal transcription factors
olu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OSTLU_41034
  09124 Replication and repair
   03420 Nucleotide excision repair
    OSTLU_41034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_41034
   03400 DNA repair and recombination proteins [BR:olu03400]
    OSTLU_41034
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     OSTLU_41034
DNA repair and recombination proteins [BR:olu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     OSTLU_41034
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4
Other DBs
NCBI-GeneID: 5002331
NCBI-ProteinID: XP_001418454
JGI: 41034
UniProt: A4RYU4
LinkDB
Position
6:complement(350603..351826)
AA seq 407 aa
MTSVEAAYGAEGANGDDDDDDVDAEDAQRALRAWEKKYQSERAWEDLEEDPVTGRLRVTS
EAQTAKARERRAKMAALATSAGAAKGMIRFTYVVVDLSRAANEEDFRPNRLSVVGQCATS
FIREYFNQNPLSQLGIIVARNGVAERLTELSGSPEAHAAALRNALDASGDFSLQNTLNVA
RTSLKSIPSYGSREVLYIVSSLSTCDPGNVWTEIAATKAAKVRVSVVAVAAELHVSRRLT
EETGGTYGVSLNADHLDDLIMAHAPPPPLPEDATKSSLVQMGFPQKKHLSKDALVVGTGG
EYVCPRCSGRIDELPSQCAVCRLTLVSSPHLARSYHHLFPVAPFKEYTRDEASAKEVLEC
KACLALIKQTDPASKCEQCSNVFCFACDCYIHEKLHNCPHCTCEREN
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgacgtcggttgaagccgcgtacggcgccgagggcgcgaacggagacgatgacgacgac
gacgtcgacgcggaggacgcccagcgcgcgctgcgcgcgtgggagaagaagtaccagagc
gaacgggcgtgggaagacttggaggaagacccggtgacgggacgcctgcgcgtcacgagc
gaggcgcagacggccaaggcgcgcgaacggcgcgcgaagatggcggcgctcgcgacgagc
gcgggagcggcgaagggaatgattcggttcacgtacgtggtggtcgatctgtcgcgggcg
gcgaacgaggaagactttcgaccgaaccggttgagcgtggtcggacagtgcgcgacgtcg
ttcatacgggaatatttcaatcagaatccgctatcgcagttggggatcatcgtcgcgagg
aatggggtggccgaacggttgacggagctgagcgggagtccggaggcgcacgcggcggcg
ctgagaaacgcgctggacgcgagcggggattttagtttgcaaaatacgctaaacgtcgcg
aggacgtcgttgaaatcgattccgtcgtacggaagtcgtgaggtgctctatatcgtgagt
tcgttgtcgacgtgtgatcctggaaatgtgtggacagagatcgcggcgacgaaggcggcc
aaggtgcgcgtgagcgtcgtcgccgtggcggcggagcttcacgtcagtcgacggctgaca
gaggagactggaggaacgtacggggtgagcttaaacgccgaccatttggatgatttaatc
atggcgcacgcaccgccgccgccgctccccgaagacgcgacgaagtcgagcttggtacaa
atgggatttccgcaaaagaagcacttgagtaaggacgcgctcgtggtcggaacggggggt
gaatacgtgtgtcctaggtgctctgggagaatcgatgaacttccttcgcagtgtgcggtg
tgtcgtttgacgctcgtgtcgtcaccacatctcgcgcgatcgtaccatcacctgtttccc
gtcgccccgttcaaggagtacacgcgcgacgaggcttcagcgaaggaggtgttggagtgt
aaagcatgcctcgcgcttatcaagcaaacagatccagcatccaagtgtgagcagtgttct
aacgtgttttgcttcgcttgcgattgctacattcacgaaaagctgcacaactgcccgcat
tgcacttgcgagcgagagaattga

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