Ostreococcus lucimarinus: OSTLU_443 Help Entry OSTLU_443         CDS       T01029                                  Name (RefSeq) predicted protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism olu  Ostreococcus lucimarinus Pathway olu03013   Nucleocytoplasmic transport olu03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:olu00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     OSTLU_443    03015 mRNA surveillance pathway     OSTLU_443  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:olu03019]     OSTLU_443 Enzymes [BR:olu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      OSTLU_443     5.6.2.5  RNA 5'-3' helicase      OSTLU_443 Messenger RNA biogenesis [BR:olu03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      OSTLU_443    mRNA cycle factors     Common to processing body (P body) and stress granule      OSTLU_443 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 UPF1_Zn_bind AAA_11 UPF1_1B_dom AAA_30 AAA_19 UvrD-helicase DEAD ResIII SLFN-g3_helicase Helicase_RecD AAA_22 nSTAND3 Viral_helicase1 AAA_16 ATPase PhoH SRP54 AAA_25 T2SSE UvrD_C_2 Motif Other DBs NCBI-GeneID:  5003749 NCBI-ProteinID:  XP_001419588 JGI:  443 UniProt:  A4S2S8 LinkDB All DBs Position 9:<405178..>407568 Genome browser AA seq 797 aa AA seqDB search SEFACAYCGISNVSCVAQCVKTKKWFCNGRSNGLPASCLIYHLVRSRNKEVRLHESSPLG DMTLECYVTGATNVFNLGFVPCKDENVVVLVTREAAQSNPATLKELNLDLALWEPLIQDK VFLPWLLQMPDKKEIDRARPVNPGKVIKLEELWKTNPEATLDDVENDDGDGEVRPVALTY EDAHLYQGVFGPLIQLEADYDKAQRESQTKDDVTVRWDIGLNKRRIAYFSFGADENAVSV TLGDSLQLRLLIQTKNEQRSWQGQGVVIKFTAQEEVGVEMYGMDAPVEYTNGYSVDFLWK GTSYERAQQALESFAEDETSVSGYIYLKLMGKDPEDMFLSGDFPKKLTAPGLPELNQSQH DAVKTVLQRPLSLVQGPPGTGKTVTSATLVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEK TGLKVVRISSRSREHLVSSVEHLTLHYQVANIGGSTHKAFQKLQQLKNELGELSAGDEKK YRNAQKKLEREILENADVICTTAVGAGDPRLANFRFRMVLIDESTQATEPECLIPIVMGA KQVVMVGDHKQLGPVVTCKQAYAAGLAQSLFERLIALGIQPIRLQIQYRMHPCLSEFPSN TFYDGTLQNGVSAIERTLSHIDFPWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEASAVE KCVTHLLNAGVSPEQIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEK DFIIMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIVIGNPKVLNKQHLFHEMLTHFRE NGCLVEGTLGSLKECMV NT seq 2391 nt NT seq  +upstreamnt  +downstreamnt agcgagttcgcgtgcgcgtactgtgggatatccaacgtctcgtgcgtggcgcagtgcgtg aagacaaagaaatggttttgcaacgggcgatcgaatggattgccggcgagctgcttgata tatcatctcgtgcggtcaagaaacaaggaggttcgactgcatgagtcgtcgccgctgggc gatatgacgctggagtgttacgtgacgggggcgacgaacgtgttcaacctcgggttcgtc ccgtgcaaagacgaaaacgtggtggttctcgtgacgagagaagcagcgcagagtaatccg gcaactcttaaggaattgaatttagacttagcgctctgggagccgctgattcaggacaag gtgttcttgccttggttgttgcagatgccggacaagaaggagattgatcgcgctcggccg gtgaacccaggaaaagtcatcaaattggaggaactatggaaaacaaatcccgaggctacg ctagacgacgtagagaacgatgacggtgacggcgaggtacgtcctgtagcgctgacgtac gaggacgcgcatttataccaaggcgtctttggaccgttgatacagctcgaggcagattac gacaaggcgcagcgagagagccaaacgaaggacgacgtcacagtccgctgggacattggc ttgaataagcgtaggattgcgtatttcagttttggtgccgatgaaaatgcggtgtcagtg acgttgggagattctttgcagttgcgactgctgatacagacaaagaacgaacagcgaagt tggcaaggacaaggcgtcgtgatcaagttcaccgcacaagaggaagtcggggtggaaatg tacggcatggatgcccccgtggaatacaccaatggctacagtgtcgactttttgtggaaa gggacgagttatgagcgcgcgcaacaggcgttggaatctttcgctgaagatgaaacttcg gtttcggggtacatttacctcaagctcatgggcaaagacccggaagatatgttcttatcc ggagattttccgaagaagttaaccgccccggggctgcctgagctcaaccaaagccaacac gatgcggttaaaacggtcctccagcgaccactgagtctagttcaaggtccaccggggact gggaagacggtgacgtcggcgacgctcgtgtaccatttagccaagcgcggcaacggtcaa gtcatcgtgtgcgcgccatcaaacgtcgcagtagatcatttggccgagaagatcgaaaag acgggcctaaaagtcgttagaatcagtagtagaagtagagagcatttggtgtcttcggtt gagcacctgacgctgcactatcaagtagccaacattggtgggtcgacgcacaaagcgttt cagaagttgcagcagctgaagaacgagctcggcgaattgagcgctggagacgagaagaag tatcgcaacgctcaaaagaaacttgagcgcgaaatcctcgagaacgcggatgtcatttgc accacagcagtcggtgccggtgatccgcgactcgcaaacttccgcttccgcatggtgctc atcgatgagtcgacgcaagccaccgaaccggagtgtttgatcccaatcgtcatgggtgcg aaacaagtcgtcatggttggcgatcacaaacagctcggcccggttgtgacgtgcaagcaa gcgtacgccgcgggtctggcgcagtcgttgtttgaacgcctcattgcgctcggtatacag cccatccgcttacagattcagtatcgtatgcatccatgcctgtccgagtttccgagcaat acattctacgatggaacgctgcaaaacggtgtgtctgcgatcgaacgaacgctttcacac atcgactttccttggcccgtaccatccaaaccgatgatgttttggagtcaaaccggacaa gaagaaatgagcgcgagcgggacgtcattcctcaatcgcgcggaggcgtcggcggtcgaa aagtgcgtcacgcatctgctgaacgccggggtgagtcctgaacagatcggggtggtgacg ccgtacgaaggacagcgcgcgtacgtggtacaacacatgacgcgtgttggtgtgctgcat ccgcaactgtacaaggacattcaagtcgcaagtgtcgactcgttccaaggaaaagaaaaa gacttcattattatgacctgcgtgcgctcgaatgaaaagtctggaattgggttcttgagc gatccaagacgtttgaacgtcgccataacacgcgcgcgaagtgggcttatcgtcatcggc aatccaaaggttttgaacaaacaacacctattccacgagatgttaacgcacttcagagag aacgggtgcctcgttgaagggacgttaggctcattaaaggagtgcatggtg

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