Oenanthe melanoleuca (Eastern black-eared wheatear): 130253406
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Entry
130253406 CDS
T09236
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oma01002
]
130253406 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130253406 (USP47)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130253406 (USP47)
Peptidases and inhibitors [BR:
oma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130253406 (USP47)
Ubiquitin system [BR:
oma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130253406 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
130253406
NCBI-ProteinID:
XP_056347937
LinkDB
All DBs
Position
5:392632..444171
Genome browser
AA seq
1436 aa
AA seq
DB search
MDWRRGGAAALPAGAEEVEAEEEEEEVEEEDEEEEEEEEKEEEKGEDEPRASPRLPLLLT
TALGSACCGLRAAPPAMVPSEENQLVPKEAECAAEEPRVLCIIQDTTNAKTVNERVTLNL
PASTPLRQLFQDVAAKVGYENGSFELLWGNGDSATDTQTPIDQNSDKTILDAGFEPGKKN
FLHLTDKDGEQPHVMQEEAGTAEDGAQERFIGPLPREGSMGCTNDYVSQSYSYSSVLSKS
ETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPERSIPYQLQRLFVLL
QTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQG
KLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYF
CERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDV
EDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKS
SLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSR
GYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIE
RNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDE
FHDYLERSYEGEEETPMGLLLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVVDL
KTESVAPPISVRAYLNQTVSEFKQLISKATQLPAETMRVVLERCYNDLRLLNVSSKTLKA
EGFFRSNKVFVESSESLDRHVVYTDSQLWKLLDRHANTIRLYVSLPEQAPGSQLRRALYQ
KSGGAAGNLEEPCERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQQQQQEGDNGDSSKS
TEASDFENIESPLNEIDSSASAENRELDNQIQVSDPENLQSEERSDSDVNNDRSTSSVDS
DILSSSHSSDTLCNVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEY
DESGKSRGEAQYMYFKSEPYTAEEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSH
FKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCK
FLLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEED
INISSNWEVFLEILDGVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKL
SEISGIPLENIEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
KTEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggattggcggcggggcggagccgcggcgctgcccgcgggagcggaggaggtggaagcg
gaggaagaggaggaggaggtggaagaggaagacgaagaagaggaggaggaggaggaaaag
gaggaggagaagggggaggatgagccgcgggcgtccccccgcctcccgctgctgctgacg
acggcgctcggttcagcctgctgcgggctccgcgccgcgccgccggccatggtgcccagc
gaggagaaccagctcgtccccaaggaggcagagtgtgctgctgaggagccccgggtgctg
tgcataatccaggacaccaccaacgccaagacggtgaacgagcgcgtgaccctgaacctg
ccggcctccaccccgctgcgccagctcttccaggacgtggctgccaaagtgggctacgag
aatggctcctttgagctgctctggggcaacggggacagtgccactgacacgcagactcca
atagatcagaacagtgacaaaaccattcttgatgctggttttgagccagggaagaagaac
tttctgcatttgacagacaaggatggtgagcagcctcacgtaatgcaggaggaggcaggt
acagcagaggatggagcacaggagaggtttataggcccccttcccagagaaggctccatg
ggatgtaccaatgactatgtcagtcaaagctactcttactcttcagtcctgagcaaatca
gagacaggttatgtggggctggtaaatcaagcaatgacttgctacttgaacagccttctg
caaacacttttcatgactcctgaatttagaaatgcattgtataagtgggaatttgaggaa
tctgaagaggatcctgagaggagtatcccctaccagcttcaaagactgtttgttttactg
cagaccagcaaaaaaagggcaattgaaacaacagatgtcacccggagttttggatgggac
agcagtgaagcatggcagcagcatgatgtgcaggagctttgtagagtcatgtttgatgct
ttggagcagaaatggaagcaaacagagcaggctgatctcataaaccagctgtaccagggc
aaactgaaggactatgtgaggtgcctggagtgtggctatgaaggctggagaatcgacacg
tacctggatatccctctggtcatccggccctatggctccagccaggcctttgctagcgtg
gaagaagcactgcatgctttcattcagcctgagatccttgatggcccaaatcagtacttt
tgtgagagatgtaagaagaaatgtgatgcaaggaagggtctgaggttcttgcacttcccg
tacctgctgacgttacagctgaagagatttgactttgattacaccacaatgcacagaatt
aaactcaatgatcgcatgacttttccagaggagctggacatgagtgtctttattgatgtt
gaagatgagaagtctcctcagaccgagagttgcactgatagtggagctgaaaatgaaggc
agttgtcacagtgatcaaatgagcaatgatttttctaatgatgatggagttgatgaagga
atctgccttgaaagcaacagtgcagcagagaggatctctaaagctggcagtgagaagagt
tctttactgtatgagctcttttctgtcatggttcattctggaagtgctgctggtggccat
tattatgcctgtataaaatcttttagtgatgatcagtggtacagctttaatgatcagcat
gttagcaagataactcaggaagatattaagaaaacatatggaggatcttctggaagcaga
ggctattattccagtgcttttgctagctccacaaatgcttacatgctgatatacagactg
aaagatccaacaagaaatgcaaagtttcttgaggcacatgaatatccagagcacattaaa
cagttggtacagaaagagagagaattagaagaacaagaaaagaggcaacgtgaaatcgaa
cgcaacacgtgcaagattaaattattctgtatgcatcctacaaagcaaataatgatggag
aacaaattggaagttcataaggacagaacactgaaggaagctgtggaaatagcttacaag
ttgatggatttggaggaggctgttcccttggactgctgccgcctggtcaagtacgatgag
ttccacgactacctggagcgctcgtacgagggggaggaggagacccccatgggcttgtta
ctcggaggggtcaagtcaacctacatgttcgacttgctgctggaaacaaggaggcctgac
caggttttccagtgctataagcctggggaggtcatggtaaaggttcatgtagttgacctg
aagactgaatctgttgctcctccaatcagtgtgcgagcttatttgaatcaaacagtttca
gagtttaaacagctaatttcaaaggccacacagctgcctgctgagaccatgcgggtggtg
ttggagcgctgctacaatgacctgcgcctgctgaacgtgtccagcaaaactctgaaagct
gaaggcttcttcaggagcaacaaggtgtttgtggaaagctcagagtccctggaccgccat
gtggtgtacacagactctcagctctggaagcttttggatcgccacgccaacaccatccgg
ctgtacgtctccttgccagagcaggctcctggctctcagctcaggagggcgctttatcag
aagtctggtggggctgcaggcaacttggaggagccttgtgaaagagtaaaaggacctgta
ggcaatatgaaatctgtagaggcaattttggaagaaagcactgaaaaactgaaaagcttg
tccctgcagcagcagcagcagcagcagcaggagggagataatggagacagcagcaaaagc
acagaagccagtgattttgaaaacattgagtcacctttaaatgaaatagactcttcagca
tcagcagaaaacagagaacttgacaaccagattcaggtttctgacccggagaacctgcag
tcggaggagcggtcggactcggacgtcaataacgacaggagcacgagttccgtggacagc
gacatcctcagctccagccacagcagtgacactctgtgcaacgtggacaatgcccccctc
cccctggccaacgggctggattctcacagcatcaccagcagcaggcgatcaaaggccaac
cagggcaagaaggaaacctgggacacagcagaggaggactctggaacggacagtgaatat
gatgaaagtggcaagagcagaggagaagcacagtatatgtactttaaatcagagccctac
actgcagaggagggttcaggagaaggacagaaatggctgatggtgcatgttgataaaaga
attacactgtctgccttcaagcaacacttggagccttttgttggagttccatcttctcac
ttcaaagtctttagagtctatgccagcaatcaagagtttgagagtgttcggctgaatgag
accctttcgtcattttctgatgacaataagataactattagacttggaagagcccttaag
aagggtgaatacagagttaaagtctatcaactcttggtaaatgagcctgagccatgcaag
tttcttctagatgcagtttttgctaaaggaatgactgtccgacagtccaaagaggagctg
cttcctcagcttcgagaacaatgtggcctagacctgacaattgacaggtttcgcctacga
aagaaaacctggaagaatccaggcactgtgtttctggattatcatatctatgaagaagat
atcaatatttccagcaactgggaggtcttcttagaaatacttgatggagtagaaaagatg
aagtccatgtcacagcttgctgttttatctaggcgatggaggccgtcagagatgaaatta
gattctttccaggaggtagtactagaaagcagcagtgtggaagaattgaaagagaagcta
agtgaaataagtggaatacccttagaaaacattgaatttgcaaagggtagaggaaccttt
ccatgtgacatttccatactagagattcatcaagacttggactggaatccgaaagtatct
acattgaatgtctggcccctgtacatttgtgatgatggtgcagtaatattttatagggat
aaaactgaagaattaatggaattaacagatgagcaaagaaatgaactgatgaaaaaagaa
agcagcagactccagaaaactggacaccgggtaacctactctccccgtaaagaaaaagca
ctaaaaatttatctggatggagcaccaaataaagatttgactcaagactga
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