Oenanthe melanoleuca (Eastern black-eared wheatear): 130253994
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Entry
130253994 CDS
T09236
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03015
mRNA surveillance pathway
oma03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130253994 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130253994 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130253994 (CPSF7)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
130253994 (CPSF7)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
UCMA
Motif
Other DBs
NCBI-GeneID:
130253994
NCBI-ProteinID:
XP_056349087
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Position
5:complement(8905827..8913546)
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AA seq
461 aa
AA seq
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MSEGVDLIDIYADEEFTQDPEFSNADQMDLYDDVLAASSQPQEKRSSSSEAPPEIRQEPS
PKPNSKPPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQTIRSVGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKILNGDKVEVRLATRQNLSQFEAQARKRVPPRA
HSRDSMDAVDGRATPTENALPPARMEKPPSVLPFFSRPPALPLMGLPPPPMPPPPPLSSA
FGVPPPPPGIPYQHLLPPPPRLPPPLAVPPPGAVPPALHLNPAFFPPPTAALGPPPDTYG
KAMAPYNHSSSRELGPPIPAVSEGEFEEIMNRNRAISSSAISKAVSGASAGDYSNAIETL
LTAIAVIKQSRVASDERCRVLLSSLKDCLHGIEAKSYSSSSSSSSRKRHRSRERSPSRSR
ESSRRHRDLLHSDDRHEDYFQERSREHERHRDRDRDRDRHH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagggagtggatctgattgacatctacgccgacgaggagttcacccaggatccg
gagttcagtaatgctgaccagatggatctctacgacgacgtgttagcagccagctcccag
ccccaggaaaagcgttccagcagctcagaagcgcctccggagatccgtcaggagccgtct
cccaagcccaacagcaaacccccagccatcctgtacacctacagcgggctccgcaacaag
agggccgccgtctacgtcgggagcttctcctggtggacgactgaccagcagctgatccag
accatccgctctgtcggagtctacgatgtggtggagctgaaattcgcggagaaccgagcc
aatggccaatccaaggggtatgcggaggtggtggtcgcctctgagaactcggtccataaa
ctcctggagctgcttcctggaaagatcctaaatggagacaaggtggaggtgaggctggcg
acccggcagaacctgtcgcagttcgaggctcaggctcgcaaacgtgtgccaccgcgggcc
cactcccgggattccatggatgcggtggatggccgggcaacgccgacggagaacgcgctg
ccccccgcccgcatggagaagcccccctcggtcctgcccttcttcagtcgcccccctgcg
ctgcccctcatggggctgccccctcctcccatgccacccccacctcccctctcctccgct
ttcggagtccctccacctcctcctggaattccctaccagcacctgctgccaccaccgccc
cggctgcccccgcccctggctgtgcccccaccgggggctgtgccccctgccctgcacctc
aatcccgccttcttcccgccacccaccgccgccctgggaccccctccagatacctacggc
aaggccatggctccctacaaccacagcagcagccgggagctgggcccgccgatcccggcc
gtgagcgaaggcgagtttgaggagatcatgaaccgcaaccgcgccatctccagcagcgcc
atttccaaggcggtgtccggcgccagcgcaggggattacagcaacgccatcgagacactg
ctcacggccatcgctgtcatcaagcagtcacgcgtggccagcgacgagcggtgccgtgtc
ctcctctcttccctcaaggattgcttgcatggaattgaggccaaatcctacagcagcagc
tccagcagcagctccaggaaaagacaccgatcccgggagcgctctcccagccggtcccgc
gagagcagccggcggcaccgggatctgctccacagcgatgatcggcacgaggattatttc
caggagcggagccgggagcacgagcggcatcgggacagggacagagacagggaccggcac
cactga
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