Oenanthe melanoleuca (Eastern black-eared wheatear): 130259302
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Entry
130259302 CDS
T09236
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130259302 (RBFOX1)
Spliceosome [BR:
oma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130259302 (RBFOX1)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
130259302
NCBI-ProteinID:
XP_056359429
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All DBs
Position
14:complement(11807968..12879956)
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AA seq
541 aa
AA seq
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MSNSCGSPEDAGKQRGRDGRIRREDGDVDGCQPEGKRLRLGTEGAKQRAAADAAMPGSGT
EQPVPGAQEGKSDYKSDVMTLVASAKNSPQGPVLTTLDASKAEETPQQPHASGAYCFHEC
SLLSDTKAECSSAVETEDRKSSKQMNCERDQLRGNQEATAPPDTMAQPYASAQFAPPQNG
IPAEYTAPHPHPAPDYTGQSTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQTDDAA
QTDGQQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK
GFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVG
AVYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRG
RTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSYGRV
YAADPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAP
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcctgcggcagcccggaggacgcggggaagcagcgaggcagagatggcagg
atcaggagggaggacggggatgtggatggttgccagccggagggaaagaggctgaggctg
ggcacggaaggagcaaagcagcgagcggcggcggacgcggcgatgccgggctcgggcaca
gaacagcccgtgcccggagcgcaggaaggcaaaagtgactataaatctgatgttatgact
ctggttgccagtgccaagaacagtcctcaaggtccagttttgacaacgctggatgccagc
aaagctgaggaaactccacagcagccccatgcaagtggtgcctattgtttccatgagtgc
agcctcctctcagacactaaagcagagtgcagttctgctgtagaaactgaggacagaaaa
agttcaaaacagatgaattgtgaaagagaccagctaaggggtaatcaggaagctacagca
cctcctgacacaatggcacagccttatgcctcagcccagttcgctccacctcagaacggt
atccctgcagaatacacagccccacatccgcatcccgctccagactacacaggccaaagc
actgttccagagcacacgctaaacatgtaccctcctgcccagacacactctgaacagagt
gcagctgacacaaatgcacaaactgtctccggcacagccacacagacagatgatgcagca
cagactgatggccagcaacagacacaatcttctgaaaacacagaaaacaaatcacagcca
aaacggctccacgtctcaaatataccattcagattccgggatccagatcttagacaaatg
tttggtcaatttggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaag
ggatttggtttcgtaactttcgaaaatagtgctgatgcggacagggcgagggagaaatta
cacggcaccgtggtagagggccgtaaaatcgaggtaaataatgccacagcacgtgtaatg
acaaataaaaagaccgtcaacccttacacgaatggctggaaattaaatccagttgttggt
gcagtttatagtccagagttctatgcaggcagggtgctgctgtgccaggcaaaccaggag
ggatctcccgtgtacagtgcccccagttcactagtatacacatccacaatgccaggattt
ccctaccctgccgccaccgccgccgccgcctaccgaggcgcgcacctacggggccgaggc
cgcacggtgtacaacaccttccgagcggcagctccccctcctcccatcccggcctacggc
ggtgttgtataccaggatggattttatggtgcagacatttatggtggttatgctgcctac
cggtatgcccagcctgccactgccactgcagctgcctacagtgacagttacggacgagtt
tatgctgcagacccctaccaccacacacttgctccagcagccacctacggcgttggtgcc
gtgaatgcttttgcacccttgactgatgccaagactaggagccatgctgatgatgtcggt
ctcgttctttcttcattacaggctagtatataccgagggggatacagccgttttgctcca
tactaa
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