Oenanthe melanoleuca (Eastern black-eared wheatear): 130262093
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Entry
130262093 CDS
T09236
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130262093 (KDM1A)
Enzymes [BR:
oma01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
130262093 (KDM1A)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
130262093 (KDM1A)
REST complex
130262093 (KDM1A)
Histone demethylases
130262093 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
MurD-like_N
GIDA
Lycopene_cycl
IlvN
Motif
Other DBs
NCBI-GeneID:
130262093
NCBI-ProteinID:
XP_056364862
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Position
23:complement(2092506..2120725)
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AA seq
850 aa
AA seq
DB search
MLAGGKKGAEVAAGGEAGPEAPVPPPAAAGALGSSSDSGGASERTPRKKEPPRASPPGGV
SEPSAVGAAPAPGAETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERN
AKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSR
LPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPY
NSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGM
DVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPL
YEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKH
VKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKS
KHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANAT
PLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEV
IAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKV
VLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV
IVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITP
GPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPGP
AGPPPPPASL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgggcggcaagaagggcgcggaggtggcggcgggcggcgaggccgggccggag
gcgccggtgcccccgcccgccgccgccggggcgctgggctcctcttcggatagcggcggg
gcttcggagcgcacgccccgcaagaaggagccgccgcgggcctcgcctccgggcggtgtg
tccgagccgtcggccgtcggggccgcccctgcgcccggcgccgaaaccaccggcatcgcc
gagacccccgagggccgcaggaccagccgccgcaagcgagccaaagtcgagtatagagag
atggatgagagtcttgcaaacctatcagaagatgagtattactctgaagaagagagaaat
gctaaagctgagaaagagaaaaaactgcccccaccacctccaccagctcctgcagaagaa
gagaatgaaagtgagccagaggagccctctgggcaagcaggaggacttcaagacgacagt
tctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagcaga
ctcccacatgacaggatgacatcccaggaagctgcctgcttccctgatatcatcagtggg
ccccagcagactcagaaggtgtttctgtacatcaggaaccgcactctgcagctctggttg
gataaccccaagattcagctgacatttgaagcaactatccaacaattagaagcaccttat
aatagtgacacagtgctcgttcacagggttcacagctacctggagcgtcatgggctgatc
aacttcggcatctacaaaagagtgaagccccttccaaccaagaagacaggaaaggtgatc
attattggttctggagtctctgggttggcagcagctcgccagttgcagagttttggaatg
gatgtcacagttctggaagccagagaccgggtaggaggaagagttgccacctttcgcaaa
gggaattacgttgctgatctgggagcaatggtggtaacaggacttggaggaaatcccatg
gctgtggtcagcaaacaagtaaatatggaactggcaaagatcaaacaaaaatgtccactt
tatgaagctaatggacaagctgttcccaaagagaaagatgaaatggtggagcaagaattt
aatcgtctgctggaagccacatcctatcttagtcatcagctggattttaatgttctcaat
aataagcctgtctccctaggtcaggctctggaggttgtcatacaattgcaggagaaacat
gtgaaggatgagcagattgagcactggaaaaaaattgtgaaaacacaggaggaattgaaa
gatcttcttaacaagatggtgaatttaaaggagaagattaaagaacttcatcagcaatat
aaggaagcatcagaagtgaagccacctcgagatattacagcagagttccttgtgaaaagc
aagcacagagacctgactgctctttgcaaggaatatgatgaattggcagaaacacaggga
aaactggaagagaaactacaagaacttgaagccaacccaccaagtgatgtttatttgtca
tcaagagacaggcaaatacttgactggcattttgcaaacctagaatttgctaatgctaca
cccctttccacactttcactgaagcactgggaccaggatgatgactttgaattcacaggc
agtcacttgactgtgaggaatggatattcctgtgtgccagtagccttagcagaagggctg
gacatcaaattaaacacggccgtgcggcaggttcgctacacagcctcaggctgtgaagtg
atagctgtaaatacccgatccaccagccagaccttcatctataagtgtgatgctgtgctg
tgcactctgcccctgggggtgctgaagcagcagcctccagctgtgcagtttgtgccaccc
cttcctgagtggaaaacctctgcagtgcagcggatgggatttggcaacctgaacaaggtt
gtgctgtgttttgatcgtgtcttctgggatcccagtgtcaatttgtttggccatgttggg
agcactactgcaagcagaggagaacttttcctcttttggaacctgtacaaagcaccaatt
ttgttggccttggtagcaggagaagcagcagggatcatggagaacatcagtgatgatgtc
attgttggtcggtgccttgctattctcaaaggcatctttggcagcagtgctgtgccccag
cctaaggagaccgtggtgtcccgctggcgtgctgacccctgggccaggggctcctactcc
tacgtggctgctggatcctctggcaatgactatgatctgatggctcagccaattactcca
gggccagccattccaggtgctccacagcccatcccccggctgttcttcgcgggcgagcac
accatccgcaactacccggccacggtgcacggggcgctgctgagcgggctgcgcgaggcc
ggccgcatcgccgaccagttcctgggcgccatgtacaccctgccgcgccagcccggcccc
gcggggccgcccccgccgcccgccagcctgtga
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